BLASTX nr result

ID: Rehmannia24_contig00026078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00026078
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              75   9e-12
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               75   9e-12
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    70   2e-10
pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    69   6e-10
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...    68   1e-09
gb|EEC83650.1| hypothetical protein OsI_29398 [Oryza sativa Indi...    67   3e-09
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    66   5e-09
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...    63   4e-08
gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ...    63   4e-08
gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]      63   5e-08
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    62   6e-08
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    61   2e-07
gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [...    61   2e-07
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    61   2e-07
gb|EMJ26064.1| hypothetical protein PRUPE_ppa022735mg, partial [...    60   4e-07
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    59   5e-07
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    59   7e-07
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    59   7e-07
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    59   9e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    58   1e-06

>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  +L+K    +D    +F FD+R++  + + E +   W   ++GT +  +  ++R C
Sbjct: 183 SDHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRAC 241

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDW---MKWNNLKVELHSAYANEEI 42
           R  + +W K N  NS  +I  L   L++  SL     W    + + LK +L  AY  EE 
Sbjct: 242 RKSLSSWKKQNNLNSLDKINQLEAALEKEQSLV----WPIFQRVSVLKKDLAKAYREEEA 297

Query: 41  YWKNKSRVQWL 9
           YWK KSR +WL
Sbjct: 298 YWKQKSRQKWL 308


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  +L+K    +D    +F FD+R++  + + E +   W   ++GT +  +  ++R C
Sbjct: 186 SDHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRAC 244

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDW---MKWNNLKVELHSAYANEEI 42
           R  + +W K N  NS  +I  L   L++  SL     W    + + LK +L  AY  EE 
Sbjct: 245 RKSLSSWKKQNNLNSLDKINQLEAALEKEQSLV----WPIFQRVSVLKKDLAKAYREEEA 300

Query: 41  YWKNKSRVQWL 9
           YWK KSR +WL
Sbjct: 301 YWKQKSRQKWL 311


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH+ ++     D  +    F +D+RWVQ +G  +++ + W      T    ++ KI  C
Sbjct: 220 SDHSPLINNLVGDNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMME-KIASC 278

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSL--GDSRDWMKWNNLKVELHSAYANEEIY 39
           R +I  W + +K +SA +I  L  KLD  T     D R+  +   LK EL   Y NEE +
Sbjct: 279 RREISKWKRVSKPSSAVRIQELQFKLDAATKQIPFDRRELAR---LKKELSQEYNNEEQF 335

Query: 38  WKNKSRVQWL 9
           W+ KSR+ W+
Sbjct: 336 WQEKSRIMWM 345


>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/128 (30%), Positives = 64/128 (50%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  +L++    K++    F FD+R      + E +  AW  SQ    L  +  K++ C
Sbjct: 222 SDHRPVLVRLTKTKEEYRGNFRFDKRLFNQPNVKETIVQAWNGSQRNENLLVLD-KLKHC 280

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  +  W K N  NS+++I      L+   S G  R  + + +LK +L  A  +EE++W 
Sbjct: 281 RSALSRWKKENNINSSTRITQARAALELEQSSGFPRADLVF-SLKNDLCKANHDEEVFWS 339

Query: 32  NKSRVQWL 9
            KSR +W+
Sbjct: 340 QKSRAKWM 347


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/112 (30%), Positives = 56/112 (50%)
 Frame = -3

Query: 338 QRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQ 159
           Q   +++ W +   + EV++SAW +    T L  I AK++    ++  W K    N   +
Sbjct: 295 QTMRYEEVWERESSLPEVIQSAWSDGNAITNLGDISAKMKNTMCKLSRWSKEKIGNVRKK 354

Query: 158 IVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWKNKSRVQWLWE 3
           I +L  KL +  S+G     ++   +K EL      EEI+WK +SR+ WL E
Sbjct: 355 IAALRDKLRECRSMGSLDSDVQVRQIKKELEELLHREEIWWKQRSRIMWLKE 406


>gb|EEC83650.1| hypothetical protein OsI_29398 [Oryza sativa Indica Group]
          Length = 1212

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/112 (30%), Positives = 56/112 (50%)
 Frame = -3

Query: 338 QRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQ 159
           Q   +++ W +   + EV++SAW +    T L  I AK++    ++  W K    N   +
Sbjct: 329 QTMRYEEVWERESSLPEVIQSAWSDGNAITHLGDISAKMKNTMCKLSRWSKEKIGNVRKK 388

Query: 158 IVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWKNKSRVQWLWE 3
           IV+L  KL +  S+G     ++   +K EL      EEI+WK +S + WL E
Sbjct: 389 IVALRDKLRECRSMGSLDSDVQVRQIKKELEELLHREEIWWKQRSCIMWLKE 440


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1225

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWG--NSQNGTQLFQIQAKIR 219
           SDH  +L   Q    + ++ F FD+RW+   G  E V+  W   +   G   FQ   KI+
Sbjct: 228 SDHKPLLASIQNKPYRPYKHFIFDKRWINKPGFKESVQEGWAFPSRGEGVPFFQ---KIK 284

Query: 218 QCRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIY 39
            CR  I  W K NK N+   I+ L+ +LD +    ++        LK +L  AY +EEI+
Sbjct: 285 NCRQTISIWKKSNKTNTEKLILELHSQLD-LAYEDENFSTEDLLALKWKLCQAYRDEEIF 343

Query: 38  WKNKS 24
           WK K+
Sbjct: 344 WKLKN 348


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 SSDHALILL-KPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIR 219
           SSDHA +LL + +    +  +   +++ W +   + EV++ AW    + + L  I  K++
Sbjct: 176 SSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMK 235

Query: 218 QCRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIY 39
               ++++W K    N   +I  L  KL ++ ++G      + +++K EL      EEI+
Sbjct: 236 VTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIW 295

Query: 38  WKNKSRVQWLWE 3
           WK +SR+ WL E
Sbjct: 296 WKQRSRITWLKE 307


>gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = -3

Query: 395 SSDHALILL-KPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIR 219
           SSDHA +LL + +    +  +   +++ W +   + EV++ AW    + + L  I  K++
Sbjct: 201 SSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEAWTMGADASTLGDINDKMK 260

Query: 218 QCRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIY 39
               ++++W K    N   +I  L  KL ++ ++G      + +++K EL      EEI+
Sbjct: 261 VTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIW 320

Query: 38  WKNKSRVQWLWE 3
           WK +SR+ WL E
Sbjct: 321 WKQRSRITWLKE 332


>gb|ABD64923.1| hypothetical protein 24.t00067 [Brassica oleracea]
          Length = 381

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/94 (37%), Positives = 52/94 (55%)
 Frame = -3

Query: 290 EVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGD 111
           EV+   W ++  G Q   +  +IR+CR  I  W K    NSA +I +L   +D+  S   
Sbjct: 56  EVIIDGWNSTIPG-QHVSVSDRIRKCRHAISQWKKAKNTNSAKRIKALTALIDEAHS-DP 113

Query: 110 SRDWMKWNNLKVELHSAYANEEIYWKNKSRVQWL 9
                + +NL+ EL  AY +EE +W+NKSR+QWL
Sbjct: 114 LCPLSEIHNLRKELLQAYKDEEAFWRNKSRIQWL 147


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 39/129 (30%), Positives = 57/129 (44%)
 Frame = -3

Query: 395 SSDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQ 216
           +SDH+ ++        +  Q F FD+RW+   G+ E +   W N  +G +  Q   K+  
Sbjct: 3   ASDHSPVIATIADKIPRGKQNFRFDKRWIGKDGLLEAISQGW-NLDSGFREGQFVEKLTN 61

Query: 215 CRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYW 36
           CR  I  W K         I  L  +LD +    D R   +   L + L  AY +EE YW
Sbjct: 62  CRRAISKWRKSLIPFGRQTIEDLKAELD-VAQRDDDRSREEITELTLRLKEAYRDEEQYW 120

Query: 35  KNKSRVQWL 9
             KSR  W+
Sbjct: 121 YQKSRSLWM 129


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/128 (28%), Positives = 65/128 (50%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           S+H  I+   + DK +    F +D+R  + + + +++ +AW    + +    ++ K+ +C
Sbjct: 218 SNHRPIITFLRQDKQRKKGLFRYDRRLKENEEIKDLIAAAWNEDLSDS----VEKKLSRC 273

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  I++W K  + NS   I +L  KL+Q   +    D      +  EL +AY  EE +WK
Sbjct: 274 RRAIISWTKETQRNSQKIIEALKVKLEQAMVI-PVNDVCLLVQINSELSAAYLAEEAFWK 332

Query: 32  NKSRVQWL 9
            +SR  WL
Sbjct: 333 QRSRQNWL 340


>gb|EMJ25902.1| hypothetical protein PRUPE_ppa025398mg, partial [Prunus persica]
          Length = 320

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/105 (27%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
 Frame = -3

Query: 314 WVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQIVSLNGKL 135
           W Q +  + ++ +AW  S  GT ++Q+  KI+  R+Q++ W +     + ++I  +  +L
Sbjct: 3   WTQHEDCESIIANAWNTSFTGTLMYQVCEKIKTTRIQLMQWQRSMFGTTKAEIQRVRSQL 62

Query: 134 DQMTSLGDSRD-WMKWNNLKVELHSAYANEEIYWKNKSRVQWLWE 3
           D +    +S +    ++ L  +L S  + EE +WK +S+V WL E
Sbjct: 63  DVVWRQPNSENTTATYHLLMSQLDSLLSREEAFWKQRSKVSWLKE 107


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/128 (31%), Positives = 61/128 (47%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  ++        K  + F FD+R  + + +  +V+  W  ++  + L+    KI +C
Sbjct: 164 SDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELARQDSVLY----KISRC 219

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  I+ W K    NSA  I      L+   S  D  D     ++  EL +AY  EE++WK
Sbjct: 220 RQSIIKWTKEQNSNSAKAIKKAQQALESALS-ADIPDPSLIGSITQELEAAYRQEELFWK 278

Query: 32  NKSRVQWL 9
             SRVQWL
Sbjct: 279 QWSRVQWL 286


>gb|EMJ26064.1| hypothetical protein PRUPE_ppa022735mg, partial [Prunus persica]
          Length = 345

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
 Frame = -3

Query: 338 QRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQ 159
           +RF F++ W ++ G  E V  AWG  Q       +  K++ C+  +L+W K    +   Q
Sbjct: 55  RRFMFEEMWTEVDGCTETVVQAWGKEQG-----DLVTKLKACQQSLLDWNKSKVGHIPMQ 109

Query: 158 IVSLNGKLDQMTSLGDSRDWMK-WNNLKVELHSAYANEEIYWKNKSRVQWL 9
           I  +  + D       + D ++    L  EL    A EE+ W+ +SRV WL
Sbjct: 110 IQQIQRQFDGFKKKPQTDDVVRCQRRLAGELDILLAREEMIWQQRSRVSWL 160


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 29/108 (26%), Positives = 56/108 (51%)
 Frame = -3

Query: 326 FDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQCRMQILNWCKGNKHNSASQIVSL 147
           +++ W +   + EV++ AW    + + L  I  K++    ++++W K    N   +I  L
Sbjct: 6   YEEVWERESSLPEVIQEAWTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDL 65

Query: 146 NGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWKNKSRVQWLWE 3
             KL ++ ++G      + +++K EL      EEI+WK +SR+ WL E
Sbjct: 66  REKLGELRNIGLLDTDNEVHSVKKELEEMLHREEIWWKQRSRITWLKE 113


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/130 (28%), Positives = 65/130 (50%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  + L  +  + +  + F FD+R +++      V++ W  + NG Q   +  ++R C
Sbjct: 601 SDHKPLFLSLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAING-QRKHLPDQVRTC 659

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  +      +  NS  +I  L   LD+  S  +  +    ++++ EL  AY +EE YW+
Sbjct: 660 RQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQ 719

Query: 32  NKSRVQWLWE 3
            KSR QW+ E
Sbjct: 720 QKSRNQWMKE 729


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 37/130 (28%), Positives = 65/130 (50%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SDH  + L  +  + +  + F FD+R +++      V++ W  + NG Q   +  ++R C
Sbjct: 581 SDHKPLFLSLEKTETRKMRPFRFDKRLLEVPHFKTYVKAGWNKAING-QRKHLPDQVRTC 639

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  +      +  NS  +I  L   LD+  S  +  +    ++++ EL  AY +EE YW+
Sbjct: 640 RQAMAKLKHKSNLNSRIRINQLQAALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQ 699

Query: 32  NKSRVQWLWE 3
            KSR QW+ E
Sbjct: 700 QKSRNQWMKE 709


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 39/130 (30%), Positives = 61/130 (46%)
 Frame = -3

Query: 398 FSSDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIR 219
           F SDH  +L+K   D +    +F +D+R        EV+  +W NS            + 
Sbjct: 217 FGSDHRPVLVKFTNDNELFRGQFRYDKRLDDDPYCIEVIHRSW-NSAMSQGTHSSFFSLI 275

Query: 218 QCRMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIY 39
           +CR  I  W   +  N+ S+I  L   LD   S+     W +   +K +L  AY +EE++
Sbjct: 276 ECRRAISVWKHSSDTNAQSRIKRLRKDLDAEKSI-QIPCWPRIEYIKDQLSLAYGDEELF 334

Query: 38  WKNKSRVQWL 9
           W+ KSR +WL
Sbjct: 335 WRQKSRQKWL 344


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1138

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/128 (27%), Positives = 62/128 (48%)
 Frame = -3

Query: 392 SDHALILLKPQIDKDKCHQRFCFDQRWVQMKGMDEVVESAWGNSQNGTQLFQIQAKIRQC 213
           SD   +L++    K++    F FD+R      + E ++ AW  +Q    + Q+  ++++C
Sbjct: 186 SDRRPVLVRLSKTKEEYKGNFRFDKRLFNQPLVKEAIQQAWNGNQRVGGM-QVLERLKKC 244

Query: 212 RMQILNWCKGNKHNSASQIVSLNGKLDQMTSLGDSRDWMKWNNLKVELHSAYANEEIYWK 33
           R  +  W + N  NS + I      L+   S G  R  + +  LK +L  A  +EE +W 
Sbjct: 245 RSALSRWKQENNSNSLTCISQARAALELEQSSGFPRSKVVFT-LKNDLCKANQDEETFWS 303

Query: 32  NKSRVQWL 9
            KSR +W+
Sbjct: 304 QKSRAKWM 311


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