BLASTX nr result
ID: Rehmannia24_contig00024923
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00024923
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
gb|ESW29295.1| hypothetical protein PHAVU_002G058500g [Phaseolus... 82 7e-14
ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_004505735.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_003609027.1| Pentatricopeptide repeat-containing protein ... 76 4e-12
ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
emb|CBI39592.3| unnamed protein product [Vitis vinifera] 75 9e-12
ref|XP_002512508.1| pentatricopeptide repeat-containing protein,... 69 6e-10
gb|EPS66302.1| hypothetical protein M569_08472, partial [Genlise... 68 1e-09
gb|EXC18345.1| hypothetical protein L484_005698 [Morus notabilis] 66 4e-09
gb|EXC07109.1| hypothetical protein L484_001609 [Morus notabilis] 66 4e-09
ref|XP_006847909.1| hypothetical protein AMTR_s00029p00111980 [A... 62 6e-08
ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citr... 62 8e-08
ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
gb|EOY11650.1| Pentatricopeptide repeat (PPR-like) superfamily p... 59 5e-07
>ref|XP_006344758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like isoform X1 [Solanum tuberosum]
gi|565355778|ref|XP_006344759.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like isoform X2 [Solanum tuberosum]
Length = 605
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = -1
Query: 277 SEPDFQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFK 98
S+P F+S+VS LISNQ WS+LK +I+ NPT FL QL FDS IL FF+WSQ
Sbjct: 36 SDPLFKSKVSELISNQHWSQLKDLIKPFNPTSFLEQLLD-SGFDSSSILGFFRWSQFYQV 94
Query: 97 VTHSIENYVKLFTVLANDSKYPKIRSLLHLFV 2
H +E+ ++ +L ND KYPK+RSLLH FV
Sbjct: 95 YHHPLEHLCRVLVLLVNDKKYPKVRSLLHDFV 126
>ref|XP_004231292.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Solanum lycopersicum]
Length = 605
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/92 (53%), Positives = 62/92 (67%)
Frame = -1
Query: 277 SEPDFQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFK 98
S+P F+S+VS LISNQ WS+LK +I+ NPT FL QL FDS IL FF+WSQ
Sbjct: 36 SDPLFKSKVSELISNQHWSQLKELIKPFNPTSFLEQLLG-SGFDSSSILGFFRWSQFYQV 94
Query: 97 VTHSIENYVKLFTVLANDSKYPKIRSLLHLFV 2
H +E+ ++ +L ND KYPK+RSLLH FV
Sbjct: 95 YHHPLEHLCRVLVLLVNDKKYPKVRSLLHDFV 126
>gb|ESW29295.1| hypothetical protein PHAVU_002G058500g [Phaseolus vulgaris]
gi|561030717|gb|ESW29296.1| hypothetical protein
PHAVU_002G058500g [Phaseolus vulgaris]
gi|561030718|gb|ESW29297.1| hypothetical protein
PHAVU_002G058500g [Phaseolus vulgaris]
Length = 583
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/86 (43%), Positives = 58/86 (67%)
Frame = -1
Query: 259 SQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIE 80
S +S L+S Q WSEL+P+ ++ P F+ QLF+ + DS+L+L FF+WSQ F++++ +E
Sbjct: 21 STISELLSKQHWSELRPLFRTTKPAIFIDQLFNAE-VDSELVLRFFQWSQKEFRISYGLE 79
Query: 79 NYVKLFTVLANDSKYPKIRSLLHLFV 2
K+ +LAN +Y K+RS L FV
Sbjct: 80 TTAKVLHLLANSKRYSKVRSFLDKFV 105
>ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = -1
Query: 259 SQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIE 80
S +S L+SNQ WSELKP ++ P FL QLF+ DS+L+L FF+WSQ F++++ +E
Sbjct: 21 STISELLSNQHWSELKPHFRTTKPAIFLDQLFN-AGVDSELVLRFFQWSQKEFRISYGLE 79
Query: 79 NYVKLFTVLANDSKYPKIRSLLHLFV 2
K+ +LAN KY K+RS L V
Sbjct: 80 TTGKVLHLLANSKKYSKVRSFLDKLV 105
>ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
+S LIS Q+WS LK ++ +P DFLHQL + D L+L +F WS+ V +SIE
Sbjct: 51 ISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVNYSIELI 110
Query: 73 VKLFTVLANDSKYPKIRSLLHLFV 2
+L +LAN YPKIRS+L FV
Sbjct: 111 CRLLNLLANAKHYPKIRSILDSFV 134
>ref|XP_004505735.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cicer arietinum]
Length = 586
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/86 (43%), Positives = 54/86 (62%)
Frame = -1
Query: 259 SQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIE 80
S++S L+ Q WSELKP + + P FL QL + DS+L+L FFKWSQ F++++ +E
Sbjct: 24 SKISELLGKQHWSELKPHLRVTKPATFLDQLLN-AGVDSELVLRFFKWSQKEFRLSYDLE 82
Query: 79 NYVKLFTVLANDSKYPKIRSLLHLFV 2
K+ LA+ +YPK+RS L V
Sbjct: 83 ATAKVLHSLAHSKRYPKVRSFLDYLV 108
>ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 583
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
+S L+S Q WSELKP + + P FL QL + DS+L+L FFKWSQ +++++ +E
Sbjct: 23 ISELLSKQHWSELKPHLRVTKPATFLDQLLN-AGVDSELVLRFFKWSQKEYRLSYGLEPT 81
Query: 73 VKLFTVLANDSKYPKIRSLLHLFV 2
K+ LAN +Y K+RS L FV
Sbjct: 82 SKVLHFLANSKRYSKVRSFLDSFV 105
>ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
+S LI+ Q WS+LK I++ +NP+ L LF+ DLIL +FKW+Q F H++E +
Sbjct: 52 ISQLIAKQHWSKLKTIVKETNPSSLLQHLFN-SEAQPDLILCYFKWTQKEFGAIHNVEQF 110
Query: 73 VKLFTVLANDSKYPKIRSLLHLF 5
+L +LAN Y KIR+LL F
Sbjct: 111 CRLLHLLANAKNYNKIRALLDSF 133
>emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/83 (43%), Positives = 52/83 (62%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
+S LI+ Q WS+LK I++ +NP+ L LF+ DLIL +FKW+Q F H++E +
Sbjct: 52 ISQLIAKQHWSKLKTIVKETNPSSLLQHLFN-SEAQPDLILCYFKWTQKEFGAIHNVEQF 110
Query: 73 VKLFTVLANDSKYPKIRSLLHLF 5
+L +LAN Y KIR+LL F
Sbjct: 111 CRLLHLLANAKNYNKIRALLDSF 133
>ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548469|gb|EEF49960.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 444
Score = 68.9 bits (167), Expect = 6e-10
Identities = 38/80 (47%), Positives = 48/80 (60%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
V LI+ Q WSELK ++S+NP LHQL DSDL L +F WSQ K++HS+E
Sbjct: 40 VVDLIAKQYWSELKTHLKSTNPIALLHQLLT-SGADSDLTLRYFTWSQKELKLSHSLELT 98
Query: 73 VKLFTVLANDSKYPKIRSLL 14
++ LA KY KIRS L
Sbjct: 99 FRMLHSLAYAKKYSKIRSFL 118
>gb|EPS66302.1| hypothetical protein M569_08472, partial [Genlisea aurea]
Length = 518
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = -1
Query: 136 ILSFFKWSQHAFKVTHSIENYVKLFTVLANDSKYPKIRSLLHLFV 2
+LS+FKWSQ AF HSI +Y+KLF +LA KYPKIRSLLH+FV
Sbjct: 1 VLSYFKWSQSAFHFQHSIHSYIKLFVLLAEGRKYPKIRSLLHIFV 45
>gb|EXC18345.1| hypothetical protein L484_005698 [Morus notabilis]
Length = 594
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 VSSLISNQKWSELKPI-IESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIEN 77
VS LI+ Q WSELK + SNPT L QLF D DLI +F WS ++H++E
Sbjct: 38 VSELIAKQHWSELKRTHLTDSNPTKLLQQLFE-SEVDPDLIFRYFNWSHKELNISHTLEL 96
Query: 76 YVKLFTVLANDSKYPKIRSLLHLFV 2
+L LA KY KIR+ L FV
Sbjct: 97 TCRLLHSLATAKKYSKIRAFLDGFV 121
>gb|EXC07109.1| hypothetical protein L484_001609 [Morus notabilis]
Length = 595
Score = 66.2 bits (160), Expect = 4e-09
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 VSSLISNQKWSELKPI-IESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIEN 77
VS LI+ Q WSELK + SNPT L QLF D DLI +F WS ++H++E
Sbjct: 39 VSELIAKQHWSELKRTHLTDSNPTKLLQQLFE-SEVDPDLIFRYFNWSHKELNISHTLEL 97
Query: 76 YVKLFTVLANDSKYPKIRSLLHLFV 2
+L LA KY KIR+ L FV
Sbjct: 98 TCRLLHSLATAKKYSKIRAFLDGFV 122
>ref|XP_006847909.1| hypothetical protein AMTR_s00029p00111980 [Amborella trichopoda]
gi|548851214|gb|ERN09490.1| hypothetical protein
AMTR_s00029p00111980 [Amborella trichopoda]
Length = 618
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/88 (42%), Positives = 49/88 (55%)
Frame = -1
Query: 265 FQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHS 86
F+S+V IS Q W+ LK I L LF + N D +L+L FFKWS+ H+
Sbjct: 55 FKSRVCHSISKQHWTALKREIGDLGYHKLLEFLFQW-NVDEELLLRFFKWSEKENGSPHN 113
Query: 85 IENYVKLFTVLANDSKYPKIRSLLHLFV 2
+E +L +L+N KY KIRSLLH V
Sbjct: 114 LEFCCRLLHLLSNAKKYDKIRSLLHSMV 141
>ref|XP_004289096.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Fragaria vesca subsp. vesca]
Length = 608
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = -1
Query: 253 VSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQHAFKVTHSIENY 74
VS LI+NQ+WSELK ++ S LHQL F+ D +LI + W+Q A +IE
Sbjct: 49 VSDLIANQRWSELKTHLKDSTFITVLHQLLDFR-ADPELIRRYLNWAQ-AHNAPTNIEIT 106
Query: 73 VKLFTVLANDSKYPKIRSLLHLFV 2
KL L+N KYPK+R+ L FV
Sbjct: 107 CKLLQALSNAKKYPKMRAFLDDFV 130
>ref|XP_006433532.1| hypothetical protein CICLE_v10003346mg [Citrus clementina]
gi|557535654|gb|ESR46772.1| hypothetical protein
CICLE_v10003346mg [Citrus clementina]
Length = 596
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = -1
Query: 289 RPFASEPDFQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQ 110
RPF S ++ LI N WS+LK +++P + QLF+ + D LIL +F WS
Sbjct: 27 RPFCSANSTIEDITELIRNHHWSKLK----NTDPNTVILQLFN-SDADPVLILRYFCWST 81
Query: 109 HAFKVTHSIENYVKLFTVLANDSKYPKIRSLLHLFV 2
+ +HS+ +L L KYPKIRS LH+FV
Sbjct: 82 KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 117
>ref|XP_006472193.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like isoform X1 [Citrus sinensis]
gi|568836322|ref|XP_006472194.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g09820-like isoform X2 [Citrus sinensis]
Length = 595
Score = 61.2 bits (147), Expect = 1e-07
Identities = 37/96 (38%), Positives = 52/96 (54%)
Frame = -1
Query: 289 RPFASEPDFQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQ 110
RPF S ++ LI N WS+LK +++P + QLF+ + D LIL +F WS
Sbjct: 26 RPFCSANSTIEDITELIRNHHWSKLK----NTDPNTVILQLFN-SDADPVLILRYFCWSI 80
Query: 109 HAFKVTHSIENYVKLFTVLANDSKYPKIRSLLHLFV 2
+ +HS+ +L L KYPKIRS LH+FV
Sbjct: 81 KELRASHSLLLTGRLLHSLVVAKKYPKIRSFLHMFV 116
>gb|EOY11650.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 587
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/85 (35%), Positives = 50/85 (58%)
Frame = -1
Query: 289 RPFASEPDFQSQVSSLISNQKWSELKPIIESSNPTDFLHQLFHFKNFDSDLILSFFKWSQ 110
R F+S+ ++ L+S Q+W++LK +++ +P+ L QL K D DL L +F+WS+
Sbjct: 48 RLFSSDNIPSPSITELLSKQRWNKLKSHLQNVSPSTLLQQLLDSKT-DPDLTLRYFRWSE 106
Query: 109 HAFKVTHSIENYVKLFTVLANDSKY 35
F ++HS+E KL LAN +
Sbjct: 107 KEFNLSHSLELSCKLLHSLANAKSF 131