BLASTX nr result
ID: Rehmannia24_contig00024717
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00024717
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus... 152 4e-35
ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mi... 151 8e-35
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 151 1e-34
ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-lik... 149 5e-34
ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-lik... 149 5e-34
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 148 6e-34
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 148 6e-34
ref|XP_002331405.1| predicted protein [Populus trichocarpa] 148 6e-34
dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japo... 147 1e-33
gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indi... 147 1e-33
gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea] 146 3e-33
ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778... 145 4e-33
gb|AFW76096.1| pseudouridylate synthase [Zea mays] 145 5e-33
gb|ACF83621.1| unknown [Zea mays] 145 5e-33
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 145 7e-33
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 143 3e-32
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 143 3e-32
gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus pe... 142 4e-32
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 142 5e-32
ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592... 142 5e-32
>gb|ESW32209.1| hypothetical protein PHAVU_002G302500g [Phaseolus vulgaris]
Length = 440
Score = 152 bits (384), Expect = 4e-35
Identities = 71/100 (71%), Positives = 81/100 (81%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQG++E +LGKFVD
Sbjct: 118 ELESVASEDRSGRWARRTFKIILSYHGGSFDGWQKQPGLNTVQGIVEASLGKFVDEKKTQ 177
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
PIEGCA+VAGRTDKGVT L+QVCSFYTW+KDVK
Sbjct: 178 LLKDKGLPIEGCAVVAGRTDKGVTGLQQVCSFYTWKKDVK 217
>ref|XP_006656336.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Oryza
brachyantha]
Length = 364
Score = 151 bits (382), Expect = 8e-35
Identities = 70/96 (72%), Positives = 79/96 (82%)
Frame = +1
Query: 16 PAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXX 195
P+ DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD
Sbjct: 58 PSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEAR 117
Query: 196 XXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
PIEGCA+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 118 SLPIEGCAIVAGRTDKGVTALQQVCSFYTWRKDVKS 153
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 444
Score = 151 bits (381), Expect = 1e-34
Identities = 70/100 (70%), Positives = 80/100 (80%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
EL SV + DR+GRWAR TF+I+LSYHG SFDGWQKQPGLNTVQ ++E +LGKFVD
Sbjct: 121 ELESVASEDRSGRWARTTFKIILSYHGGSFDGWQKQPGLNTVQSIVEGSLGKFVDEKKTQ 180
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
PIEGCA+VAGRTDKGVT L+QVCSFYTW+KDVK
Sbjct: 181 LLKDKGLPIEGCAIVAGRTDKGVTGLQQVCSFYTWKKDVK 220
>ref|XP_004166389.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 149 bits (375), Expect = 5e-34
Identities = 71/100 (71%), Positives = 77/100 (77%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
EL D+TGRWAR TF+I+LSY G SFDGWQKQPGLNTVQGL+ER+LGKFVD
Sbjct: 102 ELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQ 161
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCALVAGRTDKGVTAL QVCSFYTWR DVK
Sbjct: 162 MLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVK 201
>ref|XP_004137363.1| PREDICTED: tRNA pseudouridine synthase A-like [Cucumis sativus]
Length = 444
Score = 149 bits (375), Expect = 5e-34
Identities = 71/100 (71%), Positives = 77/100 (77%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
EL D+TGRWAR TF+I+LSY G SFDGWQKQPGLNTVQGL+ER+LGKFVD
Sbjct: 102 ELNRAAVKDKTGRWARATFKIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQ 161
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCALVAGRTDKGVTAL QVCSFYTWR DVK
Sbjct: 162 MLKDKCLPLEGCALVAGRTDKGVTALRQVCSFYTWRTDVK 201
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 148 bits (374), Expect = 6e-34
Identities = 69/99 (69%), Positives = 80/99 (80%)
Frame = +1
Query: 4 LVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXX 183
L V D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E++LG+FVD
Sbjct: 119 LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 178
Query: 184 XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK
Sbjct: 179 LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVK 217
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 148 bits (374), Expect = 6e-34
Identities = 69/99 (69%), Positives = 80/99 (80%)
Frame = +1
Query: 4 LVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXX 183
L V D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E++LG+FVD
Sbjct: 110 LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 169
Query: 184 XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK
Sbjct: 170 LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVK 208
>ref|XP_002331405.1| predicted protein [Populus trichocarpa]
Length = 428
Score = 148 bits (374), Expect = 6e-34
Identities = 69/99 (69%), Positives = 80/99 (80%)
Frame = +1
Query: 4 LVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXX 183
L V D++GRWARVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E++LG+FVD
Sbjct: 90 LEGVSNVDKSGRWARVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKSLGRFVDEKKAQQ 149
Query: 184 XXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCA VAGRTDKGV+AL+QVCSFYTWRKDVK
Sbjct: 150 LKEQCKPLEGCASVAGRTDKGVSALQQVCSFYTWRKDVK 188
>dbj|BAD45865.1| pseudouridylate synthase-like [Oryza sativa Japonica Group]
Length = 495
Score = 147 bits (372), Expect = 1e-33
Identities = 68/93 (73%), Positives = 77/93 (82%)
Frame = +1
Query: 25 DRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXXP 204
DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD P
Sbjct: 113 DRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLP 172
Query: 205 IEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
+EGCA+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 173 LEGCAVVAGRTDKGVTALQQVCSFYTWRKDVKS 205
>gb|EAZ01977.1| hypothetical protein OsI_24011 [Oryza sativa Indica Group]
gi|125598125|gb|EAZ37905.1| hypothetical protein
OsJ_22255 [Oryza sativa Japonica Group]
Length = 417
Score = 147 bits (372), Expect = 1e-33
Identities = 68/93 (73%), Positives = 77/93 (82%)
Frame = +1
Query: 25 DRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXXP 204
DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD P
Sbjct: 113 DRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDEKKAKQLEARSLP 172
Query: 205 IEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
+EGCA+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 173 LEGCAVVAGRTDKGVTALQQVCSFYTWRKDVKS 205
>gb|EPS66156.1| pseudouridine synthase, partial [Genlisea aurea]
Length = 406
Score = 146 bits (368), Expect = 3e-33
Identities = 67/98 (68%), Positives = 79/98 (80%)
Frame = +1
Query: 10 SVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXX 189
S+P RTGRWAR+TF+I+LSYHG+SFDGWQKQPGLNTVQGLIE +LG F+D
Sbjct: 93 SLPNEQRTGRWARLTFKIILSYHGYSFDGWQKQPGLNTVQGLIENSLGVFIDEKKALQLK 152
Query: 190 XXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
P +GCA+VAGRTDKGV+AL QVCSFYTWRK+V+A
Sbjct: 153 EKNLPRDGCAVVAGRTDKGVSALGQVCSFYTWRKEVEA 190
>ref|XP_004965639.1| PREDICTED: uncharacterized protein LOC101778125 [Setaria italica]
Length = 422
Score = 145 bits (367), Expect = 4e-33
Identities = 68/101 (67%), Positives = 80/101 (79%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
+ ++ + DR GRW RVTF+I+LSYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD
Sbjct: 112 QTATISSKDRGGRWERVTFKIVLSYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAK 171
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
PIEG A+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 172 QLEARSLPIEGGAIVAGRTDKGVTALQQVCSFYTWRKDVKS 212
>gb|AFW76096.1| pseudouridylate synthase [Zea mays]
Length = 422
Score = 145 bits (366), Expect = 5e-33
Identities = 66/92 (71%), Positives = 76/92 (82%)
Frame = +1
Query: 28 RTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXXPI 207
R GRW RVTF++++SYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD PI
Sbjct: 120 RGGRWERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSLPI 179
Query: 208 EGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
EGCA+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 180 EGCAIVAGRTDKGVTALQQVCSFYTWRKDVKS 211
>gb|ACF83621.1| unknown [Zea mays]
Length = 414
Score = 145 bits (366), Expect = 5e-33
Identities = 66/92 (71%), Positives = 76/92 (82%)
Frame = +1
Query: 28 RTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXXPI 207
R GRW RVTF++++SYHG SFDGWQKQPGLNTVQGL+E+ LG+FVD PI
Sbjct: 112 RGGRWERVTFKVVISYHGGSFDGWQKQPGLNTVQGLVEKHLGQFVDERKAKQLEARSLPI 171
Query: 208 EGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
EGCA+VAGRTDKGVTAL+QVCSFYTWRKDVK+
Sbjct: 172 EGCAIVAGRTDKGVTALQQVCSFYTWRKDVKS 203
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 145 bits (365), Expect = 7e-33
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
EL DR GRWARV F+I LSYHG SFDGWQKQPGLNTVQGL+E++LGKFVD
Sbjct: 104 ELEHFSNEDRFGRWARVNFKIDLSYHGGSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQ 163
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EGCA+VAGRTDKGV+AL QVCSFYTWRKDV+
Sbjct: 164 QLKEACKPLEGCAVVAGRTDKGVSALRQVCSFYTWRKDVR 203
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 143 bits (360), Expect = 3e-32
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
E +V DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTVQGL+E +LG+FVD
Sbjct: 92 EFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQ 151
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EG VAGRTDKGVTAL+QVCSFYTW+KDVK
Sbjct: 152 QLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVK 191
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 143 bits (360), Expect = 3e-32
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = +1
Query: 1 ELVSVPAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXX 180
E +V DR GRWAR+TF+I+LSYHG SFDGWQKQPGLNTVQGL+E +LG+FVD
Sbjct: 92 EFGNVLTKDRGGRWARLTFKIVLSYHGASFDGWQKQPGLNTVQGLVEASLGRFVDERKAQ 151
Query: 181 XXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+EG VAGRTDKGVTAL+QVCSFYTW+KDVK
Sbjct: 152 QLKEKNLPVEGMVTVAGRTDKGVTALQQVCSFYTWKKDVK 191
>gb|EMJ23926.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
Length = 409
Score = 142 bits (359), Expect = 4e-32
Identities = 64/96 (66%), Positives = 78/96 (81%)
Frame = +1
Query: 16 PAPDRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXX 195
P+ D+ GRWAR+TF+I++SYHG SFDGWQ+QPGLNTVQ ++E++LGKFVD
Sbjct: 74 PSQDKGGRWARLTFKIVVSYHGGSFDGWQRQPGLNTVQSVVEKSLGKFVDERKAQMLKDK 133
Query: 196 XXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVKA 303
P+EG ALVAGRTDKGVTA+ QVCSFYTWRKDVK+
Sbjct: 134 GLPLEGAALVAGRTDKGVTAVHQVCSFYTWRKDVKS 169
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 142 bits (358), Expect = 5e-32
Identities = 62/91 (68%), Positives = 74/91 (81%)
Frame = +1
Query: 25 DRTGRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDXXXXXXXXXXXXP 204
+R+GRWAR TF+++L YHG SFDGWQKQPGLNTVQGL+ER+LG+FVD P
Sbjct: 119 ERSGRWARATFKVVLGYHGASFDGWQKQPGLNTVQGLVERSLGRFVDEKKAQLLKDKCLP 178
Query: 205 IEGCALVAGRTDKGVTALEQVCSFYTWRKDV 297
+E C +VAGRTDKGVTAL+QVCSFYTWRKD+
Sbjct: 179 LEACTVVAGRTDKGVTALQQVCSFYTWRKDI 209
>ref|XP_006344572.1| PREDICTED: uncharacterized protein LOC102592314 [Solanum tuberosum]
Length = 436
Score = 142 bits (358), Expect = 5e-32
Identities = 68/104 (65%), Positives = 79/104 (75%), Gaps = 4/104 (3%)
Frame = +1
Query: 1 ELVSVPAPDRT----GRWARVTFRILLSYHGFSFDGWQKQPGLNTVQGLIERALGKFVDX 168
ELV++P D++ GRWAR F I+LSYHG SFDGWQKQP LNTVQGL+ER+LG+FVD
Sbjct: 98 ELVNIPVKDKSRDKSGRWARANFMIVLSYHGGSFDGWQKQPDLNTVQGLVERSLGEFVDE 157
Query: 169 XXXXXXXXXXXPIEGCALVAGRTDKGVTALEQVCSFYTWRKDVK 300
P+E CALVAGRTDKGV+A +QVCSFYTWRKDVK
Sbjct: 158 KKAQLLKDKNLPLEACALVAGRTDKGVSASQQVCSFYTWRKDVK 201