BLASTX nr result

ID: Rehmannia24_contig00024471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00024471
         (393 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243331.1| PREDICTED: putative cell wall protein-like [...    63   5e-08
gb|EXB62270.1| hypothetical protein L484_022158 [Morus notabilis]      62   8e-08
ref|XP_002277834.1| PREDICTED: putative cell wall protein-like [...    58   1e-06
emb|CAN68917.1| hypothetical protein VITISV_000181 [Vitis vinifera]    58   1e-06
dbj|BAJ34926.1| hypothetical protein [Vitis hybrid cultivar]           57   2e-06
gb|AFK34490.1| unknown [Lotus japonicus]                               55   7e-06

>ref|XP_004243331.1| PREDICTED: putative cell wall protein-like [Solanum lycopersicum]
          Length = 115

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
 Frame = +3

Query: 15  FDGSVLIPGIGRVMVPKKGSH---FHDNPITGAPSRXXXXXXXXXXXXXXXXRRNYVPGG 185
           +DG+VLIPGIGRV+VP KG+H   F  NPITG+ +                     +PGG
Sbjct: 48  YDGTVLIPGIGRVVVPPKGTHVNPFTYNPITGSNNGNGLVIP--------------IPGG 93

Query: 186 DDTFLPNPGVE 218
           DDTF+PNPGV+
Sbjct: 94  DDTFIPNPGVK 104


>gb|EXB62270.1| hypothetical protein L484_022158 [Morus notabilis]
          Length = 144

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
 Frame = +3

Query: 3   WL-GHFDGSVLIPGIGRVMVP---------KKGSHFHDNPITGAPSRXXXXXXXXXXXXX 152
           WL  H DGSVLIPG+GRV++P         K   H + NPITG  S              
Sbjct: 43  WLVDHHDGSVLIPGLGRVLLPPLHGHHGLHKDHDHLYYNPITGTYSSGTGRAPLGHGIIP 102

Query: 153 XXXRRNYVPGGDDTFLPNPGVE 218
              R +Y+PGGDDT +PNPG E
Sbjct: 103 STPR-SYIPGGDDTLVPNPGFE 123


>ref|XP_002277834.1| PREDICTED: putative cell wall protein-like [Vitis vinifera]
          Length = 122

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   WLGHFDGSVLIPGIGRVMVPKKGSHF-HDNPITGAPSRXXXXXXXXXXXXXXXXRRNYVP 179
           W    DGS+LIPG+GRVMVP  GS+  +D  I    S                   +Y+P
Sbjct: 43  WFIEPDGSLLIPGLGRVMVPGYGSYTPYDGSIPSGSSGSDGSTGGTG---------SYIP 93

Query: 180 GGDDTFLPNPGVE 218
           GGDDTF+PNPGVE
Sbjct: 94  GGDDTFVPNPGVE 106


>emb|CAN68917.1| hypothetical protein VITISV_000181 [Vitis vinifera]
          Length = 122

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +3

Query: 3   WLGHFDGSVLIPGIGRVMVPKKGSHF-HDNPITGAPSRXXXXXXXXXXXXXXXXRRNYVP 179
           W    DGS+LIPG+GRVMVP  GS+  +D  I    S                   +Y+P
Sbjct: 43  WFIEPDGSLLIPGLGRVMVPGYGSYTPYDGSIPSGSSGSDGSTGGTG---------SYIP 93

Query: 180 GGDDTFLPNPGVE 218
           GGDDTF+PNPGVE
Sbjct: 94  GGDDTFVPNPGVE 106


>dbj|BAJ34926.1| hypothetical protein [Vitis hybrid cultivar]
          Length = 122

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/72 (43%), Positives = 37/72 (51%)
 Frame = +3

Query: 3   WLGHFDGSVLIPGIGRVMVPKKGSHFHDNPITGAPSRXXXXXXXXXXXXXXXXRRNYVPG 182
           W    DGS+LIPG+GRVMVP  GS+         P                    +Y+PG
Sbjct: 43  WFIEPDGSLLIPGVGRVMVPGYGSY--------TPYGGSIPSGSSGSDGSTGGTGSYIPG 94

Query: 183 GDDTFLPNPGVE 218
           GDDTF+PNPGVE
Sbjct: 95  GDDTFVPNPGVE 106


>gb|AFK34490.1| unknown [Lotus japonicus]
          Length = 127

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/67 (44%), Positives = 33/67 (49%)
 Frame = +3

Query: 18  DGSVLIPGIGRVMVPKKGSHFHDNPITGAPSRXXXXXXXXXXXXXXXXRRNYVPGGDDTF 197
           DG V IPG+G V  P K      NP TG   R                 R+YVPGGDDTF
Sbjct: 47  DGRVYIPGVGPVGFPPKHGLIPQNPFTGGAGRAGTGAGAGSGSGRPG--RSYVPGGDDTF 104

Query: 198 LPNPGVE 218
           +PNPG E
Sbjct: 105 VPNPGYE 111


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