BLASTX nr result
ID: Rehmannia24_contig00024305
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00024305
(536 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise... 240 2e-61
ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin... 231 8e-59
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu... 224 1e-56
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 222 4e-56
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub... 221 1e-55
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr... 221 1e-55
gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus pe... 218 7e-55
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub... 218 7e-55
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub... 216 2e-54
ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutr... 206 3e-51
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no... 205 5e-51
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps... 205 6e-51
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub... 204 8e-51
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub... 203 2e-50
gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus... 202 4e-50
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi... 201 7e-50
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub... 201 1e-49
gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative... 201 1e-49
gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative... 201 1e-49
gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis th... 200 2e-49
>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
Length = 1379
Score = 240 bits (612), Expect = 2e-61
Identities = 114/179 (63%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+HASQLSNPFLGLPL++GKCESCGTGE GQCEGHFGYIE PTPIYHPDH++E
Sbjct: 38 THASQLSNPFLGLPLDSGKCESCGTGEPGQCEGHFGYIEFPTPIYHPDHITELKKMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFER-VMSCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
ER +MSC EE SQI++ E KT+DGA YLELKVP +S+L EG+
Sbjct: 98 CLKCLKLKTRKVKNIGAMERMLMSCCEETSQITVYETKTSDGASYLELKVPPKSKLREGY 157
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLEK+GFRYG+ Y SRPLLPSEVM+ILKK+P+ET+K L ++GYFPQ+GY+++ LPVP
Sbjct: 158 WNFLEKHGFRYGHTY-SRPLLPSEVMSILKKLPKETKKSLLSRGYFPQEGYVLRFLPVP 215
>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 991
Score = 231 bits (589), Expect = 8e-59
Identities = 110/178 (61%), Positives = 133/178 (74%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SH+SQL+NPFLGLPLE GKCESCGT E G+CEGHFGYIELP PIYHP HVSE
Sbjct: 40 SHSSQLTNPFLGLPLEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLL 99
Query: 355 XXXXXXXXXXXXXXXXLFERVMSCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFW 176
+ ER+ SC EE +QISI E KTTDGAY L+LK+PSR RL +GFW
Sbjct: 100 CLKCLKLKTNKIKSSGVAERLFSCCEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFW 159
Query: 175 NFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
NFLE+YGFRYG+ +R LLP EV+ +L+++PQ+TRKKL+ KGYFPQDGYI++++PVP
Sbjct: 160 NFLERYGFRYGDDI-TRTLLPCEVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVP 216
>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
gi|550343552|gb|EEE78905.2| hypothetical protein
POPTR_0003s19630g [Populus trichocarpa]
Length = 1920
Score = 224 bits (570), Expect = 1e-56
Identities = 113/184 (61%), Positives = 131/184 (71%), Gaps = 6/184 (3%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SH+SQL+NPFLGLPLE GKCESCGT E G+CEGHFG+I LP PIYHP H+SE
Sbjct: 38 SHSSQLTNPFLGLPLEFGKCESCGTSEPGKCEGHFGFIHLPIPIYHPSHISELKRMLSLI 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMSCHE----EVSQISINEAKTTDGAYYLELKVPSRSR 194
ER++SC E E +QISI E K TDGA +LELK+PSRSR
Sbjct: 98 CLKCLKLKRNKIQIKSNGVAERLLSCCEVSIKECAQISIREVKNTDGACFLELKLPSRSR 157
Query: 193 LEEGFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQH 14
L +G WNFLE+YGFRYG+ + +RPLLP EVM ILK++P ETRKKLS KGYFPQDGYI+Q
Sbjct: 158 LRDGCWNFLERYGFRYGDDF-TRPLLPCEVMQILKRIPAETRKKLSGKGYFPQDGYILQQ 216
Query: 13 LPVP 2
LPVP
Sbjct: 217 LPVP 220
>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
subunit 1 [Solanum lycopersicum]
Length = 1632
Score = 222 bits (566), Expect = 4e-56
Identities = 112/180 (62%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H S L NPFLGLPLE G+CESCGT E GQCEGHFGYIELP PIYHPDHVSE
Sbjct: 39 THPSLLLNPFLGLPLEAGRCESCGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLL 98
Query: 355 XXXXXXXXXXXXXXXXLFERVM-SCHEEVSQISINEAKTTDGAYYLELKVP-SRSRLEEG 182
+ ER++ SC E+VSQ+S+ E KT+DGA YLELKVP + ++L+E
Sbjct: 99 CLKCLKMKNRKVKNAGVLERMLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE- 157
Query: 181 FWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLEKYG+RYG+ Y SRPLLPSEV+AIL+++ ++TRKKLSAKGYFPQ+GYI+Q+LPVP
Sbjct: 158 -WNFLEKYGYRYGDGY-SRPLLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVP 215
>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
sinensis]
Length = 1865
Score = 221 bits (562), Expect = 1e-55
Identities = 110/181 (60%), Positives = 132/181 (72%), Gaps = 3/181 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQL+NPFLGLPLE GKCESCGT E G+CEGHFGYIELP PIYHP H+SE
Sbjct: 38 SHASQLANPFLGLPLEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEE 185
+R++S C EE SQ+SI + KTTDGA+YLELK+PS+ RL
Sbjct: 98 CLKCLKMKSTKFQIKNDGVAQRLLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCA 157
Query: 184 GFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPV 5
GFWNFLE+YGFRYG+ +R LL SEV +LK++P+ETRKKL+ KGYFPQDGYI+++LPV
Sbjct: 158 GFWNFLERYGFRYGDSL-TRTLLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPV 216
Query: 4 P 2
P
Sbjct: 217 P 217
>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
gi|557522591|gb|ESR33958.1| hypothetical protein
CICLE_v10004129mg [Citrus clementina]
Length = 1867
Score = 221 bits (562), Expect = 1e-55
Identities = 110/181 (60%), Positives = 132/181 (72%), Gaps = 3/181 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQL+NPFLGLPLE GKCESCGT E G+CEGHFGYIELP PIYHP H+SE
Sbjct: 38 SHASQLANPFLGLPLEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEE 185
+R++S C EE SQ+SI + KTTDGA+YLELK+PS+ RL
Sbjct: 98 CLKCLKMKSTKLQIKNDGVAQRLLSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCA 157
Query: 184 GFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPV 5
GFWNFLE+YGFRYG+ +R LL SEV +LK++P+ETRKKL+ KGYFPQDGYI+++LPV
Sbjct: 158 GFWNFLERYGFRYGDSL-TRTLLASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPV 216
Query: 4 P 2
P
Sbjct: 217 P 217
>gb|EMJ20080.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
Length = 1855
Score = 218 bits (555), Expect = 7e-55
Identities = 111/181 (61%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQLSNPFLGLPLE GKCESCGT EAG+CEGHFGYIELP PI+HP+HVSE
Sbjct: 38 SHASQLSNPFLGLPLEFGKCESCGTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEE 185
ER++S C E+ SQ+SI E K TDG+ L+LK PS+SR
Sbjct: 98 CLKCLKMKKNKFPTKNAGLAERMLSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPP 157
Query: 184 GFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPV 5
GFWNFLE+YGFRYG+ + R LLP EVM +LK++PQETRKKL+AKGYFPQDGYI+ +PV
Sbjct: 158 GFWNFLERYGFRYGDGH-IRTLLPCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPV 216
Query: 4 P 2
P
Sbjct: 217 P 217
>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
sativus]
Length = 1959
Score = 218 bits (555), Expect = 7e-55
Identities = 106/179 (59%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+HASQLSNPFLGLP+E GKCESCGT E G+CEGHFGYIELP PIYHP+H++E
Sbjct: 39 THASQLSNPFLGLPIEFGKCESCGTSEPGKCEGHFGYIELPIPIYHPNHITELKKMLSLL 98
Query: 355 XXXXXXXXXXXXXXXXLFERVM-SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
ER++ SC E+ SQ++I EAK DGA YL+LKVPSR+ L+E F
Sbjct: 99 CLKCLKMKKTKNIGFA--ERLLSSCCEDASQVTIREAKKADGASYLQLKVPSRTSLQERF 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
W+FLE+YGFRYG+ + +R LLP EV +LKK+P ETRKKL+ +GY+PQDGYI+Q+LPVP
Sbjct: 157 WDFLERYGFRYGDNF-TRTLLPCEVKEMLKKIPNETRKKLAGRGYYPQDGYILQYLPVP 214
>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
Length = 1830
Score = 216 bits (551), Expect = 2e-54
Identities = 105/179 (58%), Positives = 132/179 (73%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQL+NPFLGLPLE GKCESCGT E GQCEGHFGYIELP PIYHP HVSE
Sbjct: 37 SHASQLTNPFLGLPLEFGKCESCGTAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLL 96
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
+ E++++ C ++ Q+S+ E + T+GA +LELK+PSRSR ++GF
Sbjct: 97 CLKCLKIRKSKVTNNGITEQLLAPCCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGF 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
W+FL +YG+RYG+ SR LLPSEVM IL+++P++TRKKL KGYFPQDGYI+Q+LPVP
Sbjct: 157 WDFLARYGYRYGHNL-SRILLPSEVMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVP 214
>ref|XP_006411250.1| hypothetical protein EUTSA_v10016128mg [Eutrema salsugineum]
gi|557112419|gb|ESQ52703.1| hypothetical protein
EUTSA_v10016128mg [Eutrema salsugineum]
Length = 1874
Score = 206 bits (524), Expect = 3e-51
Identities = 105/179 (58%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H+SQLSN FLGLPLE G+CESCG E +CEGHFGYIELP PIYHP HVSE
Sbjct: 38 NHSSQLSNSFLGLPLEFGRCESCGATEPDKCEGHFGYIELPVPIYHPAHVSELKQMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
L ER++ C EE S ISI E K +DGA YLELK PSRSRL+EG
Sbjct: 98 CLKCLNIKKAKSTSGGLAERLLGVCCEEASNISIRE-KASDGASYLELKFPSRSRLQEGC 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLE+YG+RYG+ Y +RPLL EV I++++P+ETRKKL+AKG+ PQ+GYI+++LPVP
Sbjct: 157 WNFLERYGYRYGSDY-TRPLLAREVKEIIRRMPEETRKKLTAKGHIPQEGYILEYLPVP 214
>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
Length = 2054
Score = 205 bits (522), Expect = 5e-51
Identities = 106/185 (57%), Positives = 120/185 (64%), Gaps = 7/185 (3%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHA+QLSNPFLGLPLE GKCESCGT + G CEGHFGYIELP PIYHP HVSE
Sbjct: 38 SHATQLSNPFLGLPLEFGKCESCGTSDLGNCEGHFGYIELPVPIYHPSHVSELKRMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLF---ERVMSCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEE 185
+ + SC ++ SQ+SI E K D +L LKVPS +L E
Sbjct: 98 CLKCLKMKKNKFPVKNAGIAEQLLASCCQDASQVSIEEVKK-DTYSHLRLKVPSNKKLHE 156
Query: 184 GFWNFLEKYGFRYGNMYNS----RPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQ 17
GFWNFLE+YGFRYG R LLP EVM I KK+P+ETRKKL KGYFPQDGYI+Q
Sbjct: 157 GFWNFLERYGFRYGGSPGEELLRRTLLPCEVMEIFKKIPEETRKKLVGKGYFPQDGYILQ 216
Query: 16 HLPVP 2
+LPVP
Sbjct: 217 YLPVP 221
>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
gi|482562261|gb|EOA26451.1| hypothetical protein
CARUB_v10022497mg [Capsella rubella]
Length = 1959
Score = 205 bits (521), Expect = 6e-51
Identities = 104/179 (58%), Positives = 127/179 (70%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+HASQLSNPFLGLPLE GKCESCG E +CEGHFGYI+LP PIYHP HV E
Sbjct: 38 NHASQLSNPFLGLPLEFGKCESCGATEPDKCEGHFGYIQLPVPIYHPAHVIELKQMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
L ER++ C EE S ISI + + +DGA YLELK PSRSRL+ G
Sbjct: 98 CLKCLKIKKAKSTSGGLAERLLGVCCEEASHISIRD-RASDGASYLELKFPSRSRLQAGC 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLE+YG+RYG+ Y +RPLL EV IL+++P+ETRKKL+AKG+ PQ+GYI+++LPVP
Sbjct: 157 WNFLERYGYRYGSDY-TRPLLAREVKEILRRIPEETRKKLAAKGHIPQEGYILEYLPVP 214
>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
vesca subsp. vesca]
Length = 1991
Score = 204 bits (520), Expect = 8e-51
Identities = 102/179 (56%), Positives = 124/179 (69%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQLSNPFLGLPLE GKCESCGT E G+CEGHFGYI+LP PIYHP+HVSE
Sbjct: 38 SHASQLSNPFLGLPLEFGKCESCGTSEPGKCEGHFGYIDLPVPIYHPNHVSELKKLLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
ER++S C E+ +Q+SI E K DG L+LK+PS + GF
Sbjct: 98 CLKCLKMKKNKSAGLA--ERLLSVCCEDAAQVSITEFKPRDGVCSLQLKLPSNKKPPPGF 155
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLE+YGFRYG+ R LLP EVM IL+++P+ET+KKL+ +GY PQDGYI+ H+PVP
Sbjct: 156 WNFLERYGFRYGDGV-KRILLPREVMQILRRIPEETKKKLATRGYNPQDGYILNHIPVP 213
>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
arietinum]
Length = 2263
Score = 203 bits (516), Expect = 2e-50
Identities = 104/183 (56%), Positives = 129/183 (70%), Gaps = 5/183 (2%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQL+NPFLGLPLE G+CESCGT EAG+CEGHFGYIELP PIYHP HV+E
Sbjct: 38 SHASQLANPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHVTELKKILSLV 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS-CHEEVS--QISINEAKTTDGAYYLELKVPSRSRL 191
+ ++S C E+V+ Q+SI E KT DGA YL LKV S+S++
Sbjct: 98 CLNCLKLKKTKFPSSSSGLAQSLLSPCCEDVNAAQVSIREVKTADGACYLALKV-SKSKM 156
Query: 190 EEGFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHL 11
+GFW FLEKYG+RYG + +R LLP EVM I+K+ PQET +KL+ KGYFPQDGY++++L
Sbjct: 157 HDGFWGFLEKYGYRYGGDH-TRALLPCEVMEIIKRFPQETNRKLAIKGYFPQDGYVLKYL 215
Query: 10 PVP 2
PVP
Sbjct: 216 PVP 218
>gb|ESW05756.1| hypothetical protein PHAVU_011G206900g [Phaseolus vulgaris]
Length = 2052
Score = 202 bits (514), Expect = 4e-50
Identities = 105/183 (57%), Positives = 127/183 (69%), Gaps = 5/183 (2%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQLSNPFLGLPLE G+CESCGT EAG+CEGHFGYIELP PIYHP H+SE
Sbjct: 38 SHASQLSNPFLGLPLEFGRCESCGTSEAGKCEGHFGYIELPVPIYHPSHISELKRLLSLV 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS-CHEEVS--QISINEAKTTDGAYYLELKVPSRSRL 191
+R++S C EE++ QISI E KT+DGA YL LKV S+S++
Sbjct: 98 CLNCLKMRKTKLSASGSGLAQRLVSPCCEEINAAQISIREVKTSDGACYLALKV-SKSKM 156
Query: 190 EEGFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHL 11
FW FLEKYG+RY + +R LLP E M I+K++P ET+KKL+ KGYFPQDGY+ +HL
Sbjct: 157 HPDFWGFLEKYGYRYEGDH-TRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVFKHL 215
Query: 10 PVP 2
PVP
Sbjct: 216 PVP 218
>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata]
gi|297325678|gb|EFH56098.1| NRPD1b [Arabidopsis lyrata
subsp. lyrata]
Length = 1947
Score = 201 bits (512), Expect = 7e-50
Identities = 101/179 (56%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H SQL+N FLGLPLE GKCESCG E +CEGHFGYI+LP PIYHP HV+E
Sbjct: 38 NHPSQLTNSFLGLPLEFGKCESCGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
L +R++ C EE SQISI + + +DGA YLELK+PSRSRL+ G
Sbjct: 98 CLKCLKIKKAKSTSGGLADRLLGVCCEEASQISIRD-RASDGASYLELKLPSRSRLQAGC 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLE+YG+RYG+ Y +RPLL EV IL+++P+ETRKKL+AKG+ PQ+GYI+++LPVP
Sbjct: 157 WNFLERYGYRYGSDY-TRPLLAREVKEILRRIPEETRKKLTAKGHIPQEGYILEYLPVP 214
>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine
max]
Length = 2082
Score = 201 bits (510), Expect = 1e-49
Identities = 101/183 (55%), Positives = 129/183 (70%), Gaps = 5/183 (2%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
SHASQLSNPFLGLPLE G+CESCGT E G+CEGHFGYIELP PIYHP H+S+
Sbjct: 38 SHASQLSNPFLGLPLEFGRCESCGTSEVGKCEGHFGYIELPIPIYHPSHISDLKRMLSMV 97
Query: 355 XXXXXXXXXXXXXXXXL--FERVMS--CHEE-VSQISINEAKTTDGAYYLELKVPSRSRL 191
+R++S C E+ + +SI E KT+DGA YL LKV S+S++
Sbjct: 98 CLNCLKLRKTKLPASSSGLAQRLISPCCQEDKAALVSIREVKTSDGACYLALKV-SKSKM 156
Query: 190 EEGFWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHL 11
+ GFW+FLEKYG+RYG + +R LLP E M I+K++P ET+KKL+ KGYFPQDGY++++L
Sbjct: 157 QNGFWSFLEKYGYRYGGDH-TRALLPCEAMEIIKRIPIETKKKLAGKGYFPQDGYVLKYL 215
Query: 10 PVP 2
PVP
Sbjct: 216 PVP 218
>gb|EOY19811.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
[Theobroma cacao]
Length = 1675
Score = 201 bits (510), Expect = 1e-49
Identities = 101/180 (56%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H SQLSN +LGLPLE GKC +CGT E G+CEGHFGYIELP PIYHP H+SE
Sbjct: 38 NHVSQLSNSYLGLPLEFGKCNACGTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLF-ERVM-SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEG 182
+R++ SC E Q+SI E KTTDGA LELK PSR
Sbjct: 98 CLKCLRMKNKFQIKSGSISDRLLASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS- 156
Query: 181 FWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
W FLEKYGFRYG+ +N+R LLP EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVP
Sbjct: 157 -WEFLEKYGFRYGDHHNTRTLLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVP 215
>gb|EOY19809.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] gi|508727913|gb|EOY19810.1|
DNA-directed RNA polymerase E subunit 1, putative
isoform 1 [Theobroma cacao]
Length = 1788
Score = 201 bits (510), Expect = 1e-49
Identities = 101/180 (56%), Positives = 121/180 (67%), Gaps = 2/180 (1%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H SQLSN +LGLPLE GKC +CGT E G+CEGHFGYIELP PIYHP H+SE
Sbjct: 38 NHVSQLSNSYLGLPLEFGKCNACGTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLF-ERVM-SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEG 182
+R++ SC E Q+SI E KTTDGA LELK PSR
Sbjct: 98 CLKCLRMKNKFQIKSGSISDRLLASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS- 156
Query: 181 FWNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
W FLEKYGFRYG+ +N+R LLP EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVP
Sbjct: 157 -WEFLEKYGFRYGDHHNTRTLLPCEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVP 215
>gb|AAY89362.1| RNA polymerase IV largest subunit [Arabidopsis thaliana]
Length = 1976
Score = 200 bits (508), Expect = 2e-49
Identities = 100/179 (55%), Positives = 128/179 (71%), Gaps = 1/179 (0%)
Frame = -2
Query: 535 SHASQLSNPFLGLPLETGKCESCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXX 356
+H SQL+N FLGLPLE GKCESCG E +CEGHFGYI+LP PIYHP HV+E
Sbjct: 38 NHPSQLTNAFLGLPLEFGKCESCGATEPDKCEGHFGYIQLPVPIYHPAHVNELKQMLSLL 97
Query: 355 XXXXXXXXXXXXXXXXLFERVMS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGF 179
L +R++ C EE SQISI + + +DGA YLELK+PSRSRL+ G
Sbjct: 98 CLKCLKIKKAKGTSGGLADRLLGVCCEEASQISIKD-RASDGASYLELKLPSRSRLQPGC 156
Query: 178 WNFLEKYGFRYGNMYNSRPLLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVP 2
WNFLE+YG+RYG+ Y +RPLL EV IL+++P+E+RKKL+AKG+ PQ+GYI+++LPVP
Sbjct: 157 WNFLERYGYRYGSDY-TRPLLAREVKEILRRIPEESRKKLTAKGHIPQEGYILEYLPVP 214