BLASTX nr result
ID: Rehmannia24_contig00023897
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00023897
(545 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 164 2e-38
emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera] 160 1e-37
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop... 159 3e-37
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 157 1e-36
gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao] 156 3e-36
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 156 3e-36
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ... 155 4e-36
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 155 4e-36
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 155 6e-36
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 154 2e-35
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf... 153 3e-35
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera] 152 5e-35
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 152 6e-35
emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera] 152 6e-35
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera] 151 8e-35
emb|CAN77626.1| hypothetical protein VITISV_029420 [Vitis vinifera] 151 1e-34
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera] 150 2e-34
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera] 149 3e-34
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 149 5e-34
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 148 7e-34
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 164 bits (414), Expect = 2e-38
Identities = 74/113 (65%), Positives = 88/113 (77%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARALLFQS++PLS+W CILTA IINR P+P++ NKT FE+L K+P
Sbjct: 690 VVERKHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVP 749
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DY+H K FGCL Y ST QRHKF+ RA C F+GYP G KGYKL DLESH +
Sbjct: 750 DYTHLKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTI 802
>emb|CAN76546.1| hypothetical protein VITISV_010420 [Vitis vinifera]
Length = 1288
Score = 160 bits (406), Expect = 1e-37
Identities = 71/113 (62%), Positives = 88/113 (77%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARALLF S +P+ +W CILTA ++INR P+P L+NKTPFEIL +K+P
Sbjct: 570 VVERKHQHILNVARALLFXSSLPVCYWSDCILTAVYLINRTPSPFLNNKTPFEILHDKLP 629
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DYSH ++FGCL YVSTL A R KF RA VF+GYP G KGYKL D+E+ +
Sbjct: 630 DYSHLRVFGCLCYVSTLKANRTKFSPRAKAAVFLGYPFGFKGYKLLDIETRSI 682
>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
(gb|U12626) [Arabidopsis thaliana]
Length = 1315
Score = 159 bits (403), Expect = 3e-37
Identities = 70/113 (61%), Positives = 84/113 (74%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VAR+L FQS +P+S+W CILTA ++INRLPAPIL +K PFE+L +P
Sbjct: 563 VVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVP 622
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
Y H K+FGCL Y ST RHKF RA C FIGYP G KGYKL DLE+H +
Sbjct: 623 TYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSI 675
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 157 bits (398), Expect = 1e-36
Identities = 72/113 (63%), Positives = 85/113 (75%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARALLFQS +PL FW C+LTA +INRLP P+L+NK+P+E L N P
Sbjct: 700 VVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPP 759
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
Y K FGCL Y ST QRHKF+ RA CVF+GYPLG KGYKL D+E+H V
Sbjct: 760 AYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAV 812
>gb|EOY25713.1| Uncharacterized protein TCM_027093 [Theobroma cacao]
Length = 994
Score = 156 bits (395), Expect = 3e-36
Identities = 68/114 (59%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
GIVERKHQH+L VAR LL QS VP+ FW +LTA HIINRLP+ +LHNKTP+E+L +K+
Sbjct: 474 GIVERKHQHILVVARGLLHQSNVPIYFWGDAVLTAVHIINRLPSKVLHNKTPYELLHHKL 533
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P Y H ++FGCL ++ TLT R K RA+KC+F+GYP KGYK+YDL ++ V
Sbjct: 534 PSYDHLRVFGCLCFMFTLTQNRKKLDKRATKCIFLGYPNNMKGYKVYDLSANNV 587
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 156 bits (395), Expect = 3e-36
Identities = 69/113 (61%), Positives = 87/113 (76%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARALLFQS +P+ +W C+ TA +INRLP+P+L+NK+P+E++ NK P
Sbjct: 733 VVERKHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQP 792
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DYS K FGCL +VST +R KF RA CVF+GYP G KGYK+ DLESH V
Sbjct: 793 DYSLLKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSV 845
>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. viridis]
Length = 1131
Score = 155 bits (393), Expect = 4e-36
Identities = 69/113 (61%), Positives = 86/113 (76%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
++ERKHQHLL VARAL+FQS+VPL +W C+LTAA +INR P+P+L NK+P+E+L K P
Sbjct: 674 VLERKHQHLLNVARALMFQSQVPLQYWGDCVLTAAFLINRTPSPLLANKSPYEVLMGKAP 733
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
Y + FGCL Y ST QRHKF R+ CVF+GYP G KGYKL DLES+K+
Sbjct: 734 QYDQLRTFGCLCYGSTSPKQRHKFMPRSRACVFLGYPSGYKGYKLLDLESNKI 786
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 155 bits (393), Expect = 4e-36
Identities = 68/113 (60%), Positives = 90/113 (79%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G VERKHQHLL VAR+L+FQSK+PLS+W C+LT H+INR P+ IL+N+TP+++LF K
Sbjct: 662 GRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKP 721
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHK 542
P+Y++FK FGCL + ST+T R KFQ RA+KC+F+GYP KGYK+ DL + K
Sbjct: 722 PNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLDLTTXK 774
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 155 bits (392), Expect = 6e-36
Identities = 69/113 (61%), Positives = 87/113 (76%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARAL+F++ +PL FW CIL+A +INRLP P+L NK+PFE+L K+P
Sbjct: 742 VVERKHQHILNVARALMFEANMPLEFWGDCILSAVFLINRLPTPLLSNKSPFELLHLKVP 801
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DY+ K+FGCL Y ST QRHKF RA CVF+GYP G KGYKL DLE++ +
Sbjct: 802 DYTSLKVFGCLCYESTSPQQRHKFAPRARACVFLGYPSGYKGYKLLDLETNTI 854
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 154 bits (388), Expect = 2e-35
Identities = 70/113 (61%), Positives = 85/113 (75%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARAL+FQS + L +W C+LTA +INR P+ +L NKTPFE+L K+P
Sbjct: 725 VVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKLP 784
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DYS K FGCL Y ST + QRHKF R+ CVF+GYP G KGYKL DLES+ V
Sbjct: 785 DYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVV 837
>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm,
score: 11.19) [Arabidopsis thaliana]
Length = 1633
Score = 153 bits (386), Expect = 3e-35
Identities = 70/113 (61%), Positives = 86/113 (76%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQHLL +AR+LLFQS VPL +W C+LTAA++INRLP+P+L NKTPFE+L K+P
Sbjct: 656 VVERKHQHLLNIARSLLFQSNVPLQYWSDCVLTAAYLINRLPSPLLDNKTPFELLLKKIP 715
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
DY+ K CL Y ST R+KF RA CVF+GYP G KGYK+ DLESH +
Sbjct: 716 DYTLLK--SCLCYASTNVHDRNKFSPRARPCVFLGYPSGYKGYKVLDLESHSI 766
>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
Length = 1125
Score = 152 bits (384), Expect = 5e-35
Identities = 64/114 (56%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L+ ARA FQ+ +PL FW C+ TA HIINRLP P+L +TPFE L+ K+
Sbjct: 407 GVVERKHRHILESARAFXFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKL 466
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +C+F+GYP+G K YKLYDL++H++
Sbjct: 467 PSYSHIRVFGCLAYATNVHVP-HKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 519
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 152 bits (383), Expect = 6e-35
Identities = 64/114 (56%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L+ ARA FQ+ +PL FW C+ TA HIINRLP P+L +TPFE L+ K+
Sbjct: 556 GVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKL 615
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +C+F+GYP+G K YKLYDL++H++
Sbjct: 616 PSYSHIRVFGCLAYATNVHVP-HKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 668
>emb|CAN73437.1| hypothetical protein VITISV_031733 [Vitis vinifera]
Length = 1322
Score = 152 bits (383), Expect = 6e-35
Identities = 64/114 (56%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L+ ARA FQ+ +PL FW C+ TA HIINRLP P+L +TPFE L+ K+
Sbjct: 579 GVVERKHRHILESARAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKL 638
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +C+F+GYP+G K YKLYDL++H++
Sbjct: 639 PSYSHIRVFGCLAYATNVHVP-HKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 691
>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
Length = 1323
Score = 151 bits (382), Expect = 8e-35
Identities = 69/114 (60%), Positives = 86/114 (75%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+LQVARAL F ++VP FW C LTA HIINRLP+PIL KTPFE+L++K
Sbjct: 523 GVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLPSPILSFKTPFELLYSKP 582
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +FIGYP+G K YKL+DL + KV
Sbjct: 583 PSYSHLRVFGCLAYATNVHTS-HKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKV 635
>emb|CAN77626.1| hypothetical protein VITISV_029420 [Vitis vinifera]
Length = 1016
Score = 151 bits (381), Expect = 1e-34
Identities = 64/114 (56%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L+ ARA FQ+ +PL FW C+ TA HIINRLP P+L +TPFE L+ K+
Sbjct: 456 GVVERKHRHILESARAFHFQAHLPLPFWAECVSTAVHIINRLPTPLLSXQTPFERLYGKL 515
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +C+F+GYP+G K YKLYDL++H++
Sbjct: 516 PSYSHIRVFGCLAYATNVHVP-HKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 568
>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
Length = 1059
Score = 150 bits (379), Expect = 2e-34
Identities = 63/114 (55%), Positives = 86/114 (75%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L+ RA FQ+ +PL FW C+ TA HIINRLP P+L +TPFE L+ K+
Sbjct: 671 GVVERKHRHILESTRAFRFQAHLPLPFWAECVSTAVHIINRLPTPLLSRQTPFERLYGKL 730
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA +C+F+GYP+G K YKLYDL++H++
Sbjct: 731 PSYSHIRVFGCLAYATNVHVP-HKFAPRAKRCIFLGYPVGQKAYKLYDLDTHQM 783
>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
Length = 1535
Score = 149 bits (377), Expect = 3e-34
Identities = 67/114 (58%), Positives = 86/114 (75%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+LQVARAL FQ+++P FW C LTA HIINRLP+P+L KTPFE L+ K
Sbjct: 702 GVVERKHRHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKP 761
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P YSH ++FGCLAY + + HKF RA C+FIGYP+G K YKL++L + K+
Sbjct: 762 PTYSHLRVFGCLAYATNVHVS-HKFDHRAIACIFIGYPVGQKAYKLFNLSTRKI 814
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 149 bits (375), Expect = 5e-34
Identities = 69/113 (61%), Positives = 83/113 (73%)
Frame = +3
Query: 207 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 386
+VERKHQH+L VARAL+FQS+VPLS W C+LTA +INR P+ +L NKTP+EIL P
Sbjct: 714 VVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAP 773
Query: 387 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
Y + FGCL Y ST QRHKFQ R+ C+F+GYP G KGYKL DLES+ V
Sbjct: 774 VYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTV 826
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 148 bits (374), Expect = 7e-34
Identities = 64/114 (56%), Positives = 87/114 (76%)
Frame = +3
Query: 204 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 383
G+VERKH+H+L VAR+L+FQS VPL FW C+LTA ++INR+P P+L NK+PFE+L+N+
Sbjct: 924 GVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRP 983
Query: 384 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKV 545
P +H ++FGC YV T + KF RAS CVF+GYP G KGYK+ DL++ K+
Sbjct: 984 PSLTHLRVFGCECYV-TNVHPKQKFDPRASICVFLGYPHGKKGYKVLDLQTQKI 1036