BLASTX nr result
ID: Rehmannia24_contig00023683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00023683
(718 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 i... 404 e-110
gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 i... 404 e-110
gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 i... 404 e-110
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So... 402 e-110
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So... 402 e-110
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 401 e-109
ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Popu... 399 e-109
ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Ci... 395 e-108
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp.... 394 e-107
gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus... 393 e-107
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso... 391 e-106
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like iso... 391 e-106
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido... 390 e-106
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]... 390 e-106
dbj|BAB08509.1| DNA excision repair cross-complementing protein;... 390 e-106
ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like iso... 390 e-106
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like iso... 390 e-106
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu... 389 e-106
ref|XP_002299520.2| DNA repair protein and transcription factor ... 389 e-106
dbj|BAB08508.1| DNA excision repair cross-complementing protein ... 387 e-105
>gb|EOY24804.1| Xeroderma pigmentosum complementation group B 2 isoform 3, partial
[Theobroma cacao]
Length = 742
Score = 404 bits (1038), Expect = e-110
Identities = 201/239 (84%), Positives = 213/239 (89%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH+ST
Sbjct: 113 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHAST 172
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLKKLL D+VI +ARI SE HG DGFTI K+AGEI
Sbjct: 173 ANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIG 232
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
HD TH+FEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 233 TGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 292
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLC
Sbjct: 293 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLC 351
>gb|EOY24803.1| Xeroderma pigmentosum complementation group B 2 isoform 2, partial
[Theobroma cacao]
Length = 809
Score = 404 bits (1038), Expect = e-110
Identities = 201/239 (84%), Positives = 213/239 (89%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH+ST
Sbjct: 113 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHAST 172
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLKKLL D+VI +ARI SE HG DGFTI K+AGEI
Sbjct: 173 ANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIG 232
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
HD TH+FEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 233 TGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 292
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLC
Sbjct: 293 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLC 351
>gb|EOY24802.1| Xeroderma pigmentosum complementation group B 1 isoform 1
[Theobroma cacao]
Length = 771
Score = 404 bits (1038), Expect = e-110
Identities = 201/239 (84%), Positives = 213/239 (89%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH+ST
Sbjct: 92 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHAST 151
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLKKLL D+VI +ARI SE HG DGFTI K+AGEI
Sbjct: 152 ANYGKVKLVLKKNRYFIESPFPEVLKKLLQDDVIARARIASESAHGSDGFTISKAAGEIG 211
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
HD TH+FEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 212 TGHDGLLNEAELAAATEEKETHAFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 271
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLC
Sbjct: 272 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLC 330
>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
Length = 768
Score = 402 bits (1034), Expect = e-110
Identities = 199/239 (83%), Positives = 211/239 (88%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETII+VL KLSKTKLPKEMI+FIH+ST
Sbjct: 94 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHAST 153
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL D+ IGKARI SEG HG DGFT+ K EIE
Sbjct: 154 ANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIE 213
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD THSFEIDPAQVENVKQRCLPNALNYPM+EEYDFRNDTVNP
Sbjct: 214 GGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNP 273
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLC
Sbjct: 274 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLC 332
>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
Length = 768
Score = 402 bits (1034), Expect = e-110
Identities = 199/239 (83%), Positives = 211/239 (88%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETII+VL KLSKTKLPKEMI+FIH+ST
Sbjct: 94 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHAST 153
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL D+ IGKARI SEG HG DGFT+ K EIE
Sbjct: 154 ANYGKVKLVLKKNRYFIESPFPEVLKRLLADDAIGKARISSEGMHGKDGFTVSKPVNEIE 213
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD THSFEIDPAQVENVKQRCLPNALNYPM+EEYDFRNDTVNP
Sbjct: 214 GGHDELINEVDVAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMMEEYDFRNDTVNP 273
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA+RI+KSCLC
Sbjct: 274 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAASRIKKSCLC 332
>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
Length = 771
Score = 401 bits (1030), Expect = e-109
Identities = 198/239 (82%), Positives = 212/239 (88%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETII+VL KLSKTKLPKEMI+FIH+ST
Sbjct: 92 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIIAVLSKLSKTKLPKEMIDFIHAST 151
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YF+ESPFPEVLK LL DEVI ++RI EG+ G+DGFTI K+ GEIE
Sbjct: 152 ANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFTISKTVGEIE 211
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G+HD THSFE+DPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 212 GRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 271
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RIRKSCLC
Sbjct: 272 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIRKSCLC 330
>ref|XP_006368763.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346907|gb|ERP65332.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 786
Score = 399 bits (1025), Expect = e-109
Identities = 199/239 (83%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH ST
Sbjct: 89 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGST 148
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPF EVLKKLL DEVI KARI E +HG +GFTI K+AGEI
Sbjct: 149 ANYGKVKLVLKKNRYFIESPFTEVLKKLLKDEVIAKARIQPESSHGTEGFTISKAAGEIG 208
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
HD THSFE+DP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 209 TSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 268
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL +ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 269 DLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 327
>ref|XP_004503689.1| PREDICTED: DNA repair helicase XPB1-like [Cicer arietinum]
Length = 765
Score = 395 bits (1014), Expect = e-108
Identities = 199/239 (83%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI FIH ST
Sbjct: 88 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIKFIHDST 147
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YF+ESPFPEVLK LL D+ I +ARI SEG HGD GFTI K+AGEIE
Sbjct: 148 ANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDGISRARITSEGMHGD-GFTITKAAGEIE 206
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD H+FEIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 207 GTHDELLNEAEVAAAAEEKEAHAFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 266
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DLE+ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 267 DLEMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 325
>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297316475|gb|EFH46898.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 779
Score = 394 bits (1011), Expect = e-107
Identities = 196/239 (82%), Positives = 210/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI FIH+ST
Sbjct: 103 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHAST 162
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL+D+VI +AR SE +G DGFTIGK++GE+E
Sbjct: 163 ANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFTIGKTSGELE 222
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
THSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND VNP
Sbjct: 223 AGPGELLNEAELAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNP 282
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 283 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLC 341
>gb|ESW32085.1| hypothetical protein PHAVU_002G291500g [Phaseolus vulgaris]
Length = 768
Score = 393 bits (1009), Expect = e-107
Identities = 196/239 (82%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETET+ISVL+KLSKTKLPKEMI FIH ST
Sbjct: 91 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMIKFIHDST 150
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YF+ESPFPEVLK LL D+ I +ARI SE +GD GFTI K+AGEIE
Sbjct: 151 ANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDAISRARIISENVNGD-GFTISKAAGEIE 209
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD THSFE+DP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 210 GTHDELLNEAEVAAVAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 269
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 270 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 328
>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 391 bits (1005), Expect = e-106
Identities = 196/239 (82%), Positives = 208/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETET+ISVL+KLSKTKLPKEM+ FIH ST
Sbjct: 91 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMVKFIHDST 150
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK LL DE I ++RI SE +GD GFTI K+AGEIE
Sbjct: 151 ANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGD-GFTISKAAGEIE 209
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD HSFEIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 210 GTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 269
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 270 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 328
>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 391 bits (1005), Expect = e-106
Identities = 196/239 (82%), Positives = 208/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETET+ISVL+KLSKTKLPKEM+ FIH ST
Sbjct: 90 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMVKFIHDST 149
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK LL DE I ++RI SE +GD GFTI K+AGEIE
Sbjct: 150 ANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISENVNGD-GFTISKAAGEIE 208
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD HSFEIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 209 GTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 268
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 269 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 327
>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
Length = 767
Score = 390 bits (1003), Expect = e-106
Identities = 193/239 (80%), Positives = 210/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI FIH+ST
Sbjct: 91 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHAST 150
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL+D+VI +AR SE +G DGF++G+++GE+E
Sbjct: 151 ANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGRTSGELE 210
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
THSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND VNP
Sbjct: 211 AGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNP 270
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 271 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLC 329
>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
AltName: Full=Protein araXPB; AltName: Full=RAD25
homolog 1; Short=AtXPB1; AltName: Full=XPB homolog 1
gi|11771735|gb|AAC49987.2| putative DNA repair protein
and transcription factor [Arabidopsis thaliana]
gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
[Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
repair helicase XPB1 [Arabidopsis thaliana]
Length = 767
Score = 390 bits (1002), Expect = e-106
Identities = 193/239 (80%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI FIH+ST
Sbjct: 91 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHAST 150
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL+D+VI +AR SE +G DGF++G++ GE+E
Sbjct: 151 ANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGRTCGELE 210
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
THSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND VNP
Sbjct: 211 AGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNP 270
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 271 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLC 329
>dbj|BAB08509.1| DNA excision repair cross-complementing protein; similar to human
Xeroderma pigmentosum group B DNA repair protein
[Arabidopsis thaliana]
Length = 755
Score = 390 bits (1002), Expect = e-106
Identities = 193/239 (80%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI FIH+ST
Sbjct: 79 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIEFIHAST 138
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL+D+VI +AR SE +G DGF++G++ GE+E
Sbjct: 139 ANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFSSEPYYGGDGFSVGRTCGELE 198
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
THSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRND VNP
Sbjct: 199 AGPGELLNEAEFAAAAEEKETHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDNVNP 258
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 259 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLC 317
>ref|XP_006584727.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
Length = 769
Score = 390 bits (1001), Expect = e-106
Identities = 195/239 (81%), Positives = 208/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETET+I+VL+KLSKTKLPKEMI FIH ST
Sbjct: 91 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMIKFIHDST 150
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK LL DE I ++R+ SE +GD GFTI K+AGEIE
Sbjct: 151 ANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGD-GFTISKAAGEIE 209
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD HSFEIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 210 GTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 269
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 270 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 328
>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like isoform X1 [Glycine max]
Length = 768
Score = 390 bits (1001), Expect = e-106
Identities = 195/239 (81%), Positives = 208/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETET+I+VL+KLSKTKLPKEMI FIH ST
Sbjct: 90 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVINVLNKLSKTKLPKEMIKFIHDST 149
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK LL DE I ++R+ SE +GD GFTI K+AGEIE
Sbjct: 150 ANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISENVNGD-GFTISKAAGEIE 208
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
G HD HSFEIDP+QVENVKQRCLPNALNYPMLEEYDFRNDTVNP
Sbjct: 209 GTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 268
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 269 DLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 327
>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
gi|550346909|gb|ERP65333.1| hypothetical protein
POPTR_0001s09670g [Populus trichocarpa]
Length = 783
Score = 389 bits (1000), Expect = e-106
Identities = 199/253 (78%), Positives = 209/253 (82%), Gaps = 14/253 (5%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH ST
Sbjct: 92 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGST 151
Query: 181 ANYGKVKLVLKKNKYFIESPFPE--------------VLKKLLNDEVIGKARIHSEGTHG 318
ANYGKVKLVLKKN+YFIESPF E VLKKLL DEVI KARI E +HG
Sbjct: 152 ANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQPESSHG 211
Query: 319 DDGFTIGKSAGEIEGQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYP 498
+GFTI K+AGEI HD THSFE+DP+QVENVKQRCLPNALNYP
Sbjct: 212 TEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYP 271
Query: 499 MLEEYDFRNDTVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 678
MLEEYDFRNDTVNPDL +ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 272 MLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 331
Query: 679 VSAATRIRKSCLC 717
VSAA RI+KSCLC
Sbjct: 332 VSAACRIKKSCLC 344
>ref|XP_002299520.2| DNA repair protein and transcription factor [Populus trichocarpa]
gi|550346908|gb|EEE84325.2| DNA repair protein and
transcription factor [Populus trichocarpa]
Length = 803
Score = 389 bits (1000), Expect = e-106
Identities = 199/253 (78%), Positives = 209/253 (82%), Gaps = 14/253 (5%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLPKEMI+FIH ST
Sbjct: 92 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPKEMIDFIHGST 151
Query: 181 ANYGKVKLVLKKNKYFIESPFPE--------------VLKKLLNDEVIGKARIHSEGTHG 318
ANYGKVKLVLKKN+YFIESPF E VLKKLL DEVI KARI E +HG
Sbjct: 152 ANYGKVKLVLKKNRYFIESPFTEASWFFVSGFPPLSLVLKKLLKDEVIAKARIQPESSHG 211
Query: 319 DDGFTIGKSAGEIEGQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYP 498
+GFTI K+AGEI HD THSFE+DP+QVENVKQRCLPNALNYP
Sbjct: 212 TEGFTISKAAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYP 271
Query: 499 MLEEYDFRNDTVNPDLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 678
MLEEYDFRNDTVNPDL +ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG
Sbjct: 272 MLEEYDFRNDTVNPDLNMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 331
Query: 679 VSAATRIRKSCLC 717
VSAA RI+KSCLC
Sbjct: 332 VSAACRIKKSCLC 344
>dbj|BAB08508.1| DNA excision repair cross-complementing protein [Arabidopsis
thaliana]
Length = 754
Score = 387 bits (993), Expect = e-105
Identities = 193/239 (80%), Positives = 209/239 (87%)
Frame = +1
Query: 1 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLDKLSKTKLPKEMINFIHSST 180
IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVL+KLSKTKLP E+I+FIH+ST
Sbjct: 79 IAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTKLPGEIIDFIHAST 138
Query: 181 ANYGKVKLVLKKNKYFIESPFPEVLKKLLNDEVIGKARIHSEGTHGDDGFTIGKSAGEIE 360
ANYGKVKLVLKKN+YFIESPFPEVLK+LL+D+VI +AR SE +G DGFTIGK++GE+E
Sbjct: 139 ANYGKVKLVLKKNRYFIESPFPEVLKRLLSDDVINRARFTSEPYYGGDGFTIGKTSGELE 198
Query: 361 GQHDXXXXXXXXXXXXXXXXTHSFEIDPAQVENVKQRCLPNALNYPMLEEYDFRNDTVNP 540
THSFEIDPA VENVKQRCLPNALNYPMLEEYDFRND VNP
Sbjct: 199 AGPGELLNEAELAAAAEEKETHSFEIDPALVENVKQRCLPNALNYPMLEEYDFRNDNVNP 258
Query: 541 DLEVELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRIRKSCLC 717
DL++ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA RI+KSCLC
Sbjct: 259 DLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAARIKKSCLC 317