BLASTX nr result

ID: Rehmannia24_contig00022843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00022843
         (615 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS65101.1| hypothetical protein M569_09680 [Genlisea aurea]        95   1e-17
ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like prote...    90   4e-16
ref|XP_004249873.1| PREDICTED: U6 snRNA-associated Sm-like prote...    90   4e-16
ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citr...    89   7e-16
ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Popu...    89   7e-16
ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like prote...    89   7e-16
gb|EMJ16383.1| hypothetical protein PRUPE_ppa013907mg [Prunus pe...    89   7e-16
gb|EMJ16382.1| hypothetical protein PRUPE_ppa013907mg [Prunus pe...    89   7e-16
gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus pe...    89   7e-16
ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like prote...    89   7e-16
ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus tri...    89   7e-16
ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like prote...    89   1e-15
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me...    89   1e-15
gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [T...    88   2e-15
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...    88   2e-15
ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycin...    88   2e-15
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...    88   2e-15
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...    88   2e-15
gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus...    87   3e-15
gb|ABR17247.1| unknown [Picea sitchensis]                              87   4e-15

>gb|EPS65101.1| hypothetical protein M569_09680 [Genlisea aurea]
          Length = 97

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 46/46 (100%), Positives = 46/46 (100%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN
Sbjct: 1   MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 46


>ref|XP_004249874.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
           [Solanum lycopersicum] gi|565368784|ref|XP_006351021.1|
           PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like
           [Solanum tuberosum]
          Length = 97

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           MGSEEES VKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_004249873.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 1
           [Solanum lycopersicum]
          Length = 104

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           MGSEEES VKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MGSEEESTVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_006434453.1| hypothetical protein CICLE_v10002950mg [Citrus clementina]
           gi|568838092|ref|XP_006473051.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like [Citrus
           sinensis] gi|557536575|gb|ESR47693.1| hypothetical
           protein CICLE_v10002950mg [Citrus clementina]
          Length = 97

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_002300922.2| hypothetical protein POPTR_0002s06940g [Populus trichocarpa]
           gi|550344440|gb|EEE80195.2| hypothetical protein
           POPTR_0002s06940g [Populus trichocarpa]
          Length = 133

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 37  MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 82


>ref|XP_004290522.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Fragaria
           vesca subsp. vesca]
          Length = 97

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|EMJ16383.1| hypothetical protein PRUPE_ppa013907mg [Prunus persica]
           gi|462411335|gb|EMJ16384.1| hypothetical protein
           PRUPE_ppa013907mg [Prunus persica]
          Length = 91

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|EMJ16382.1| hypothetical protein PRUPE_ppa013907mg [Prunus persica]
          Length = 96

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|EMJ01842.1| hypothetical protein PRUPE_ppa013901mg [Prunus persica]
          Length = 97

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_003634512.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like isoform 2
           [Vitis vinifera] gi|296081172|emb|CBI18198.3| unnamed
           protein product [Vitis vinifera]
          Length = 109

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_002307496.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| small
           nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 97

 Score = 89.4 bits (220), Expect = 7e-16
 Identities = 44/46 (95%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SEEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_004513701.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm3-like [Cicer
           arietinum]
          Length = 98

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 480 GSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           G+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 3   GAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 47


>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
           gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
           protein LSm3 [Medicago truncatula]
          Length = 98

 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 43/45 (95%), Positives = 44/45 (97%)
 Frame = +3

Query: 480 GSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           G+EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 3   GTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 47


>gb|EOY16704.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
          Length = 97

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M SE+ESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MASEDESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MAAEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|NP_001236557.1| uncharacterized protein LOC100306547 [Glycine max]
           gi|255628849|gb|ACU14769.1| unknown [Glycine max]
          Length = 97

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MSTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis] gi|561025339|gb|ESW24024.1|
           hypothetical protein PHAVU_004G095700g [Phaseolus
           vulgaris]
          Length = 97

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|ESW24417.1| hypothetical protein PHAVU_004G129000g [Phaseolus vulgaris]
          Length = 97

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 43/46 (93%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EEESAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MTTEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


>gb|ABR17247.1| unknown [Picea sitchensis]
          Length = 97

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 42/46 (91%), Positives = 44/46 (95%)
 Frame = +3

Query: 477 MGSEEESAVKEPLDLIRLSLDERIYVKLRHDRELRGKLHAYDQHLN 614
           M +EE+SAVKEPLDLIRLSLDERIYVKLR DRELRGKLHAYDQHLN
Sbjct: 1   MATEEDSAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLN 46


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