BLASTX nr result
ID: Rehmannia24_contig00022824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022824
(470 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c... 100 2e-19
ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla... 99 4e-19
gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theo... 98 1e-18
gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theo... 98 1e-18
ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citr... 98 1e-18
ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloropla... 97 2e-18
ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloropla... 95 1e-17
gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus pe... 95 1e-17
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla... 94 1e-17
gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis] 94 2e-17
ref|XP_006369929.1| hypothetical protein POPTR_0001s35190g [Popu... 93 4e-17
ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Popu... 93 4e-17
ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloropla... 93 4e-17
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan... 93 4e-17
ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Caps... 92 7e-17
ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp.... 90 3e-16
ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Popu... 88 1e-15
ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutr... 86 4e-15
ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group] g... 86 7e-15
gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa Japo... 86 7e-15
>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
gi|223539350|gb|EEF40941.1| polypeptide deformylase,
putative [Ricinus communis]
Length = 282
Score = 100 bits (250), Expect = 2e-19
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = +1
Query: 241 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 420
S++ KP PV AQA+RSFS KE +A+ ADL FE PLKIVEYPDPILR KNKR+ TF
Sbjct: 53 SSIAKPPSIPVRAQAKRSFS--FKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTF 110
Query: 421 DESLKKLVDEMFDVMY 468
D++LKKLVDEMFDVMY
Sbjct: 111 DDNLKKLVDEMFDVMY 126
>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
gi|296087647|emb|CBI34903.3| unnamed protein product
[Vitis vinifera]
Length = 275
Score = 99.4 bits (246), Expect = 4e-19
Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = +1
Query: 109 MACATCIHSNPFAHXXXXXXXXXXXXXHSP--VRRLLAGAGFHTLSSNLYKPLVRPVIAQ 282
MA A+C+HS+ ++ S + R + + F + ++ PL++ V Q
Sbjct: 1 MAFASCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQ-VQVQ 59
Query: 283 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 462
A+R FS KE +AS ADL FE PLKIVEYPDPILRAKNK + TFD++LKKLVDEMFDV
Sbjct: 60 AKRGFS--FKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDV 117
Query: 463 MY 468
MY
Sbjct: 118 MY 119
>gb|EOY02428.1| Polypeptide deformylase, putative isoform 5 [Theobroma cacao]
Length = 279
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +1
Query: 232 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 411
T S N P + PV AQA+R F ++K+ VAS DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46 TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103
Query: 412 KTFDESLKKLVDEMFDVMY 468
TFDE+LKKLVDEMFDVMY
Sbjct: 104 DTFDENLKKLVDEMFDVMY 122
>gb|EOY02424.1| Polypeptide deformylase, putative isoform 1 [Theobroma cacao]
gi|508710528|gb|EOY02425.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710529|gb|EOY02426.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
gi|508710530|gb|EOY02427.1| Polypeptide deformylase,
putative isoform 1 [Theobroma cacao]
Length = 278
Score = 98.2 bits (243), Expect = 1e-18
Identities = 51/79 (64%), Positives = 60/79 (75%)
Frame = +1
Query: 232 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 411
T S N P + PV AQA+R F ++K+ VAS DL F+ PLKIVEYPDPILR +NKR+
Sbjct: 46 TSSLNQTNPQLTPVHAQAKRGF--LSKDDEVASMEDLRFDSPLKIVEYPDPILRKRNKRI 103
Query: 412 KTFDESLKKLVDEMFDVMY 468
TFDE+LKKLVDEMFDVMY
Sbjct: 104 DTFDENLKKLVDEMFDVMY 122
>ref|XP_006446529.1| hypothetical protein CICLE_v10016231mg [Citrus clementina]
gi|567908433|ref|XP_006446530.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|567908435|ref|XP_006446531.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549140|gb|ESR59769.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549141|gb|ESR59770.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
gi|557549142|gb|ESR59771.1| hypothetical protein
CICLE_v10016231mg [Citrus clementina]
Length = 274
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/67 (71%), Positives = 55/67 (82%)
Frame = +1
Query: 268 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 447
P++ QA+R + KE +VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD +LKKLVD
Sbjct: 52 PLLTQAKRRYGFSTKEDSVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDYNLKKLVD 111
Query: 448 EMFDVMY 468
EMFDVMY
Sbjct: 112 EMFDVMY 118
>ref|XP_006470303.1| PREDICTED: peptide deformylase 1B, chloroplastic-like isoform X1
[Citrus sinensis] gi|568832146|ref|XP_006470304.1|
PREDICTED: peptide deformylase 1B, chloroplastic-like
isoform X2 [Citrus sinensis]
gi|568832148|ref|XP_006470305.1| PREDICTED: peptide
deformylase 1B, chloroplastic-like isoform X3 [Citrus
sinensis]
Length = 282
Score = 97.1 bits (240), Expect = 2e-18
Identities = 59/122 (48%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
Frame = +1
Query: 109 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVR--RLLAGAGFHTLSSNLYKPLVRPVIAQ 282
MACAT + S+ +H +R RL + A + + PL + Q
Sbjct: 9 MACATRLCSSSLSHALFPVLINQTAVSTKLLRFNRLYSTARLFSSPNRTNLPL----LTQ 64
Query: 283 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 462
A+R + KE VAS ADL FE PLKIVEYPDPILRAKNKR+ TFD++LKKLVDEMFD
Sbjct: 65 AKRRYGFSTKEDPVASPADLRFERPLKIVEYPDPILRAKNKRIDTFDDNLKKLVDEMFDF 124
Query: 463 MY 468
MY
Sbjct: 125 MY 126
>ref|XP_006338575.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Solanum
tuberosum]
Length = 279
Score = 94.7 bits (234), Expect = 1e-17
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = +1
Query: 226 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 405
F + SSN KP V AQARR S K +A+ ADL FE PLKIVEYPDPILRAKNK
Sbjct: 45 FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFEVPLKIVEYPDPILRAKNK 102
Query: 406 RVKTFDESLKKLVDEMFDVMY 468
R+ FD +LKKLVDEMFD+MY
Sbjct: 103 RIGKFDANLKKLVDEMFDIMY 123
>gb|EMJ17002.1| hypothetical protein PRUPE_ppa009947mg [Prunus persica]
Length = 271
Score = 94.7 bits (234), Expect = 1e-17
Identities = 49/67 (73%), Positives = 56/67 (83%)
Frame = +1
Query: 268 PVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 447
PV AQA+R FS KE VA+AAD+ FE PLKIVEYPDPILRAKNKR+ +FDE+LK LVD
Sbjct: 51 PVHAQAKRGFS--VKEDEVATAADVEFETPLKIVEYPDPILRAKNKRIDSFDENLKILVD 108
Query: 448 EMFDVMY 468
EMFD+MY
Sbjct: 109 EMFDIMY 115
>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
sativus]
Length = 273
Score = 94.4 bits (233), Expect = 1e-17
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = +1
Query: 241 SNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTF 420
S+ +K V AQA+R FS AKE VAS+ DL FE PLKIVEYPDPILRAKNKR+ +F
Sbjct: 45 SSKFKAPSTLVYAQAKRGFS--AKEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSF 102
Query: 421 DESLKKLVDEMFDVMY 468
D++LKKLV EMFDVMY
Sbjct: 103 DDNLKKLVQEMFDVMY 118
>gb|EXC20304.1| Peptide deformylase 1B [Morus notabilis]
Length = 266
Score = 93.6 bits (231), Expect = 2e-17
Identities = 52/71 (73%), Positives = 57/71 (80%)
Frame = +1
Query: 256 PLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLK 435
PLV PV+AQARR S KE VAS ADL FE PLKIV YPDPILRAKNKR+ +FD++LK
Sbjct: 5 PLV-PVVAQARRGSS--LKEDEVASPADLQFEPPLKIVVYPDPILRAKNKRIDSFDDNLK 61
Query: 436 KLVDEMFDVMY 468
KLV EMFDVMY
Sbjct: 62 KLVHEMFDVMY 72
>ref|XP_006369929.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|550348932|gb|ERP66498.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 197
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = +1
Query: 190 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIV 369
HS + L SS + +P + +++ P K+ VA+ +DL FE PLKIV
Sbjct: 20 HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIV 79
Query: 370 EYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 468
EYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY
Sbjct: 80 EYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMY 112
>ref|XP_002300047.2| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|566152890|ref|XP_006369926.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|566152892|ref|XP_006369927.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348928|gb|EEE84852.2| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348929|gb|ERP66495.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
gi|550348930|gb|ERP66496.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 268
Score = 92.8 bits (229), Expect = 4e-17
Identities = 47/93 (50%), Positives = 61/93 (65%)
Frame = +1
Query: 190 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIV 369
HS + L SS + +P + +++ P K+ VA+ +DL FE PLKIV
Sbjct: 20 HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIV 79
Query: 370 EYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 468
EYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY
Sbjct: 80 EYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMY 112
>ref|XP_004306350.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 275
Score = 92.8 bits (229), Expect = 4e-17
Identities = 57/96 (59%), Positives = 67/96 (69%), Gaps = 7/96 (7%)
Frame = +1
Query: 202 RRLLAGAGFHTLS--SNLYKPL-----VRPVIAQARRSFSPMAKEAAVASAADLLFEGPL 360
RR L A FH S+ +PL V AQA+R FS KE VASAAD+ FE PL
Sbjct: 24 RRPLFPAIFHRFCTFSSADRPLSTANRFTAVRAQAKRGFS--LKEDQVASAADVEFETPL 81
Query: 361 KIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 468
+IVEYPDPILRAKNKR+ TFD++LKKLV+EMFD+MY
Sbjct: 82 EIVEYPDPILRAKNKRLDTFDDNLKKLVEEMFDIMY 117
>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
Full=Peptide deformylase 1B, chloroplastic; Short=PDF
1B; AltName: Full=Polypeptide deformylase; Flags:
Precursor gi|11320950|gb|AAG33972.1| peptide
deformylase-like protein [Solanum lycopersicum]
Length = 279
Score = 92.8 bits (229), Expect = 4e-17
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = +1
Query: 226 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 405
F + SSN KP V AQARR S K +A+ ADL F PLKIVEYPDPILRAKNK
Sbjct: 45 FFSASSN--KPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNK 102
Query: 406 RVKTFDESLKKLVDEMFDVMY 468
R+ FD +LKKLVDEMFD+MY
Sbjct: 103 RIDNFDANLKKLVDEMFDIMY 123
>ref|XP_006288433.1| hypothetical protein CARUB_v10001691mg [Capsella rubella]
gi|482557139|gb|EOA21331.1| hypothetical protein
CARUB_v10001691mg [Capsella rubella]
Length = 273
Score = 92.0 bits (227), Expect = 7e-17
Identities = 51/87 (58%), Positives = 58/87 (66%)
Frame = +1
Query: 208 LLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPI 387
LL G + + N PL PV A +R KE VASA+DL FE PLKIVEYPDPI
Sbjct: 34 LLKSTGMFSSAVNRSTPLTSPVRAAVKRV---PRKEDEVASASDLEFETPLKIVEYPDPI 90
Query: 388 LRAKNKRVKTFDESLKKLVDEMFDVMY 468
LRAKNKR+ FDE+LK LVD MFD+MY
Sbjct: 91 LRAKNKRIGVFDENLKNLVDAMFDIMY 117
>ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319520|gb|EFH49942.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 273
Score = 89.7 bits (221), Expect = 3e-16
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +1
Query: 238 SSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKT 417
+ N PL+ PV A+ +R K+ VASA+DL FE PL+IVEYPDPILRAKNKR+
Sbjct: 44 TGNRTSPLISPVRAEVKRV---SRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGV 100
Query: 418 FDESLKKLVDEMFDVMY 468
FD++LK LVD MFDVMY
Sbjct: 101 FDQNLKNLVDAMFDVMY 117
>ref|XP_006369928.1| hypothetical protein POPTR_0001s35190g [Populus trichocarpa]
gi|550348931|gb|ERP66497.1| hypothetical protein
POPTR_0001s35190g [Populus trichocarpa]
Length = 269
Score = 87.8 bits (216), Expect = 1e-15
Identities = 47/94 (50%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +1
Query: 190 HSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAA-DLLFEGPLKI 366
HS + L SS + +P + +++ P K+ VA+ DL FE PLKI
Sbjct: 20 HSRTQTLCEPIRLARFSSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATTGDLEFEAPLKI 79
Query: 367 VEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 468
VEYPDPILRAKNKR+ +FD++LKKLVDEMFDVMY
Sbjct: 80 VEYPDPILRAKNKRIDSFDDNLKKLVDEMFDVMY 113
>ref|XP_006399979.1| hypothetical protein EUTSA_v10014367mg [Eutrema salsugineum]
gi|557101069|gb|ESQ41432.1| hypothetical protein
EUTSA_v10014367mg [Eutrema salsugineum]
Length = 273
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/86 (55%), Positives = 56/86 (65%)
Frame = +1
Query: 211 LAGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPIL 390
L G + + N PL PV A+ +R K+ VAS +DL FE PLKIVEYPDPIL
Sbjct: 35 LKGTVMFSSAVNRIGPLTSPVRAEVKRL---SRKDDEVASVSDLQFETPLKIVEYPDPIL 91
Query: 391 RAKNKRVKTFDESLKKLVDEMFDVMY 468
RAKNKR+ FDE+LK LVD MF VMY
Sbjct: 92 RAKNKRIGVFDENLKNLVDAMFHVMY 117
>ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
gi|75251983|sp|Q5VNN5.1|DEF1B_ORYSJ RecName:
Full=Peptide deformylase 1B, chloroplastic;
Short=OsPDF1B; Short=PDF 1B; Flags: Precursor
gi|55297005|dbj|BAD68576.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|55297594|dbj|BAD68940.1| putative polygalacturonase
[Oryza sativa Japonica Group]
gi|113533200|dbj|BAF05583.1| Os01g0637600 [Oryza sativa
Japonica Group] gi|164633054|gb|ABY64740.1| peptide
deformylase 1B1 [Oryza sativa Japonica Group]
gi|215741408|dbj|BAG97903.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 269
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 6/70 (8%)
Frame = +1
Query: 277 AQARRSF------SPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKK 438
A+ARR F +P A++ A+AADL FE PLK+V+YPDPILRA+NKR+ TFD++L+
Sbjct: 45 ARARRGFGSAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRS 104
Query: 439 LVDEMFDVMY 468
L DEMFDVMY
Sbjct: 105 LTDEMFDVMY 114
>gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa Japonica Group]
Length = 267
Score = 85.5 bits (210), Expect = 7e-15
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 6/70 (8%)
Frame = +1
Query: 277 AQARRSF------SPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKK 438
A+ARR F +P A++ A+AADL FE PLK+V+YPDPILRA+NKR+ TFD++L+
Sbjct: 45 ARARRGFGSAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRS 104
Query: 439 LVDEMFDVMY 468
L DEMFDVMY
Sbjct: 105 LTDEMFDVMY 114