BLASTX nr result
ID: Rehmannia24_contig00022721
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022721
(764 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containi... 128 2e-27
ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citr... 128 2e-27
ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi... 127 5e-27
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi... 127 5e-27
gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily p... 126 7e-27
ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi... 125 2e-26
gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [... 125 2e-26
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,... 124 3e-26
ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, par... 124 5e-26
gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Moru... 123 8e-26
gb|EPS64936.1| hypothetical protein M569_09839, partial [Genlise... 122 1e-25
gb|ESW24614.1| hypothetical protein PHAVU_004G145400g [Phaseolus... 122 1e-25
ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containi... 121 3e-25
ref|XP_003595651.1| Pentatricopeptide repeat-containing protein ... 121 3e-25
ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutr... 118 3e-24
ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containi... 117 4e-24
ref|XP_006373587.1| hypothetical protein POPTR_0016s00750g [Popu... 115 1e-23
ref|XP_004488390.1| PREDICTED: pentatricopeptide repeat-containi... 115 1e-23
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ... 115 1e-23
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar... 114 5e-23
>ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Citrus sinensis]
Length = 915
Score = 128 bits (322), Expect = 2e-27
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPD+ITYTN+I AL
Sbjct: 841 CGLR--------PDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 892
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
++ND FLEA+KWSLWMKQ+GL
Sbjct: 893 RRNDKFLEAIKWSLWMKQIGL 913
>ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citrus clementina]
gi|557556791|gb|ESR66805.1| hypothetical protein
CICLE_v10007430mg [Citrus clementina]
Length = 851
Score = 128 bits (321), Expect = 2e-27
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPD+ITYTN+I AL
Sbjct: 777 CGLR--------PDLCSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKITYTNMITAL 828
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
++ND FLEA+KWSLWMKQ+GL
Sbjct: 829 QRNDKFLEAIKWSLWMKQIGL 849
>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Solanum lycopersicum]
Length = 1201
Score = 127 bits (318), Expect = 5e-27
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVE AV LVKEMRENGIEPDRITYTNLINAL+KND FLEAVKWSL
Sbjct: 1135 LCSYNTLIKAYGIAGMVERAVDLVKEMRENGIEPDRITYTNLINALRKNDKFLEAVKWSL 1194
Query: 232 WMKQMGL 252
WMKQ+GL
Sbjct: 1195 WMKQIGL 1201
>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product
[Vitis vinifera]
Length = 900
Score = 127 bits (318), Expect = 5e-27
Identities = 61/67 (91%), Positives = 64/67 (95%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAV LVKEMRENGI+PDRITY NLINAL+KND FLEAVKWSL
Sbjct: 834 LCSYNTLIKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSL 893
Query: 232 WMKQMGL 252
WMKQMGL
Sbjct: 894 WMKQMGL 900
>gb|EOY31499.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 916
Score = 126 bits (317), Expect = 7e-27
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAVGL+KEMRENG+EPD ITY NLI AL+KND FLEAVKWSL
Sbjct: 850 LCSYNTLIKAYGIAGMVEDAVGLIKEMRENGVEPDNITYNNLITALRKNDKFLEAVKWSL 909
Query: 232 WMKQMGL 252
WMKQMG+
Sbjct: 910 WMKQMGM 916
>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like isoform X1 [Solanum tuberosum]
gi|565353364|ref|XP_006343602.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 937
Score = 125 bits (314), Expect = 2e-26
Identities = 60/67 (89%), Positives = 64/67 (95%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVE AV LVKEMR+NGIEPDRITYTNLINAL+KND FLEAVKWSL
Sbjct: 871 LCSYNTLIKAYGIAGMVERAVDLVKEMRKNGIEPDRITYTNLINALRKNDKFLEAVKWSL 930
Query: 232 WMKQMGL 252
WMKQ+GL
Sbjct: 931 WMKQIGL 937
>gb|EMJ04907.1| hypothetical protein PRUPE_ppa019391mg, partial [Prunus persica]
Length = 766
Score = 125 bits (313), Expect = 2e-26
Identities = 59/67 (88%), Positives = 64/67 (95%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAV LVKEMRENGI+PD+ITY NLINAL+KND +LEAVKWSL
Sbjct: 700 LCSYNTLIKAYGIAGMVEDAVHLVKEMRENGIQPDKITYINLINALRKNDEYLEAVKWSL 759
Query: 232 WMKQMGL 252
WMKQMGL
Sbjct: 760 WMKQMGL 766
>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 955
Score = 124 bits (312), Expect = 3e-26
Identities = 60/81 (74%), Positives = 68/81 (83%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYG+AGMVEDA+ LVKEMRENGIEPD+ITY+NLI AL
Sbjct: 883 CGLR--------PDLCSYNTLIKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITAL 934
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
+KND +LEAVKWSLWMKQ+GL
Sbjct: 935 QKNDKYLEAVKWSLWMKQLGL 955
>ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, partial [Populus
trichocarpa] gi|550335167|gb|EEE91375.2| hypothetical
protein POPTR_0006s007001g, partial [Populus
trichocarpa]
Length = 738
Score = 124 bits (310), Expect = 5e-26
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAVGLVKEMR+NG+EPD+ITYTNLI L+KND +LEAVKWSL
Sbjct: 672 LCSYNTLIKAYGIAGMVEDAVGLVKEMRQNGVEPDKITYTNLITTLQKNDKYLEAVKWSL 731
Query: 232 WMKQMGL 252
WMKQ GL
Sbjct: 732 WMKQRGL 738
>gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 889
Score = 123 bits (308), Expect = 8e-26
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
L +YNTLIKAYGIAGMVEDAVGLVKEMRENGIEPD++TY NLI A+K+ND FLEAVKWSL
Sbjct: 823 LYSYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDKVTYVNLITAMKRNDEFLEAVKWSL 882
Query: 232 WMKQMGL 252
WMKQMGL
Sbjct: 883 WMKQMGL 889
>gb|EPS64936.1| hypothetical protein M569_09839, partial [Genlisea aurea]
Length = 865
Score = 122 bits (307), Expect = 1e-25
Identities = 56/67 (83%), Positives = 63/67 (94%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAVGLVKEMR+ G+EPDR+TY NLI AL++ND+FLEAVKWSL
Sbjct: 799 LCSYNTLIKAYGIAGMVEDAVGLVKEMRDKGVEPDRVTYINLIAALRRNDLFLEAVKWSL 858
Query: 232 WMKQMGL 252
WMKQ GL
Sbjct: 859 WMKQQGL 865
>gb|ESW24614.1| hypothetical protein PHAVU_004G145400g [Phaseolus vulgaris]
Length = 852
Score = 122 bits (306), Expect = 1e-25
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMVE+AVGL+KEMR+NGIEPD+ TYTNLI AL
Sbjct: 780 CGLR--------PDLCSYNTLIKAYGIAGMVEEAVGLIKEMRKNGIEPDKTTYTNLITAL 831
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
++ND FLEAVKWSLWMKQM L
Sbjct: 832 RRNDNFLEAVKWSLWMKQMEL 852
>ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 885
Score = 121 bits (303), Expect = 3e-25
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGIAGMVEDAV L+KEMRENG+EPD+ITY NLI AL+KND +LEAVKWSL
Sbjct: 819 LCSYNTLIKAYGIAGMVEDAVYLLKEMRENGVEPDKITYINLIAALRKNDEYLEAVKWSL 878
Query: 232 WMKQMGL 252
WMKQMGL
Sbjct: 879 WMKQMGL 885
>ref|XP_003595651.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484699|gb|AES65902.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 785
Score = 121 bits (303), Expect = 3e-25
Identities = 60/81 (74%), Positives = 67/81 (82%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMVE+AV L+KEMR+NGIEPD+ TYTNLINAL
Sbjct: 713 CGLR--------PDLCSYNTLIKAYGIAGMVEEAVELIKEMRKNGIEPDQTTYTNLINAL 764
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
K+ND FLEAVKWSLWMKQ+ L
Sbjct: 765 KRNDKFLEAVKWSLWMKQIKL 785
>ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutrema salsugineum]
gi|557113835|gb|ESQ54118.1| hypothetical protein
EUTSA_v10024344mg [Eutrema salsugineum]
Length = 916
Score = 118 bits (295), Expect = 3e-24
Identities = 56/79 (70%), Positives = 65/79 (82%)
Frame = +1
Query: 16 LRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKK 195
LR L E LC+YNTLIKAYGI GMVE+AVGLVKEMR GI PD++TYTNL+ AL++
Sbjct: 838 LRELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRVKGITPDKVTYTNLVTALRR 897
Query: 196 NDMFLEAVKWSLWMKQMGL 252
ND FLEA+KWSLWMKQMG+
Sbjct: 898 NDEFLEAIKWSLWMKQMGI 916
>ref|XP_003522936.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like isoform X1 [Glycine max]
gi|571450583|ref|XP_006578471.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like isoform X2 [Glycine max]
Length = 854
Score = 117 bits (293), Expect = 4e-24
Identities = 57/79 (72%), Positives = 65/79 (82%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMV +AVGL+KEMR+NGIEPD+ +YTNLI AL
Sbjct: 782 CGLR--------PDLCSYNTLIKAYGIAGMVAEAVGLIKEMRKNGIEPDKKSYTNLITAL 833
Query: 190 KKNDMFLEAVKWSLWMKQM 246
++ND FLEAVKWSLWMKQM
Sbjct: 834 RRNDKFLEAVKWSLWMKQM 852
>ref|XP_006373587.1| hypothetical protein POPTR_0016s00750g [Populus trichocarpa]
gi|550320504|gb|ERP51384.1| hypothetical protein
POPTR_0016s00750g [Populus trichocarpa]
Length = 484
Score = 115 bits (289), Expect = 1e-23
Identities = 59/81 (72%), Positives = 64/81 (79%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+ NTLIKAYGIAG VEDAV LVKEMR+NGIEPD ITYTNLI AL
Sbjct: 412 CGLR--------PDLCSCNTLIKAYGIAGTVEDAVCLVKEMRQNGIEPDEITYTNLITAL 463
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
++ND +LEAVKWSLWMKQ GL
Sbjct: 464 QQNDKYLEAVKWSLWMKQRGL 484
>ref|XP_004488390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cicer arietinum]
Length = 782
Score = 115 bits (289), Expect = 1e-23
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +1
Query: 10 CGLRGLGEGV*VSSLCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINAL 189
CGLR LC+YNTLIKAYGIAGMVE AV L+KEMR+NGIEPDR TY+NL+ AL
Sbjct: 710 CGLR--------PDLCSYNTLIKAYGIAGMVEAAVDLIKEMRKNGIEPDRKTYSNLVTAL 761
Query: 190 KKNDMFLEAVKWSLWMKQMGL 252
K+ND +LEAVKWSLWMKQ+ L
Sbjct: 762 KRNDKYLEAVKWSLWMKQLEL 782
>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315195|gb|EFH45618.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 906
Score = 115 bits (289), Expect = 1e-23
Identities = 52/67 (77%), Positives = 60/67 (89%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGI GMVE+AVGLVKEMR I PD++TYTNL+ AL+KND FLEA+KWSL
Sbjct: 840 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTALRKNDEFLEAIKWSL 899
Query: 232 WMKQMGL 252
WMKQMG+
Sbjct: 900 WMKQMGI 906
>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 114 bits (284), Expect = 5e-23
Identities = 51/67 (76%), Positives = 60/67 (89%)
Frame = +1
Query: 52 LCNYNTLIKAYGIAGMVEDAVGLVKEMRENGIEPDRITYTNLINALKKNDMFLEAVKWSL 231
LC+YNTLIKAYGI GMVE+AVGLVKEMR I PD++TYTNL+ AL++ND FLEA+KWSL
Sbjct: 838 LCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSL 897
Query: 232 WMKQMGL 252
WMKQMG+
Sbjct: 898 WMKQMGI 904