BLASTX nr result
ID: Rehmannia24_contig00022681
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022681
(383 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlise... 109 3e-22
gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus pe... 98 1e-18
ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247... 96 7e-18
emb|CBI21383.3| unnamed protein product [Vitis vinifera] 91 2e-16
emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera] 91 2e-16
ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotei... 90 4e-16
gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Mor... 88 1e-15
ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotei... 87 3e-15
gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus... 85 9e-15
ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotei... 85 1e-14
ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotei... 83 3e-14
ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotei... 83 3e-14
gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma c... 82 6e-14
gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Th... 82 6e-14
gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma c... 82 6e-14
ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotei... 81 1e-13
ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotei... 81 1e-13
ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotei... 81 1e-13
ref|XP_002534389.1| RNA binding protein, putative [Ricinus commu... 81 1e-13
ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotei... 79 6e-13
>gb|EPS61714.1| hypothetical protein M569_13079, partial [Genlisea aurea]
Length = 304
Score = 109 bits (273), Expect = 3e-22
Identities = 58/102 (56%), Positives = 63/102 (61%)
Frame = +3
Query: 78 DDFTSYYAPPLHHSYYQXXXXXXXXXXXXXXXXXXXXQPIHVQSQFVYAPPIYPQSSQDQ 257
DD TS+YAPP+HH YY QPIH + A SSQD
Sbjct: 1 DDLTSFYAPPIHHPYYHPNPPADAHTPPTSLL-----QPIHAHQPHILA--FATHSSQDH 53
Query: 258 LRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
+RTLFVAGLPEDVKPREIYNLFRE PGY SSNLRPP SSN+Q
Sbjct: 54 VRTLFVAGLPEDVKPREIYNLFREFPGYMSSNLRPPGSSNSQ 95
>gb|EMJ08043.1| hypothetical protein PRUPE_ppa027064mg [Prunus persica]
Length = 328
Score = 97.8 bits (242), Expect = 1e-18
Identities = 53/110 (48%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Frame = +3
Query: 75 MDDFTSYYAPP------LHHSYYQXXXXXXXXXXXXXXXXXXXXQPI---HVQSQFVYAP 227
MDD +YY PP +H+ YYQ QP H YAP
Sbjct: 1 MDDMAAYYPPPPPPPGSVHYPYYQQPPPPQPPPSVAPPLQHHLVQPYFPQHPPPFSSYAP 60
Query: 228 PIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
+ PQ S D++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR PT +
Sbjct: 61 ALVPQPSHDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRTPTEKS 110
>ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 95.5 bits (236), Expect = 7e-18
Identities = 56/121 (46%), Positives = 65/121 (53%), Gaps = 18/121 (14%)
Frame = +3
Query: 75 MDDFTSYYAPPLHH-----SYYQXXXXXXXXXXXXXXXXXXXXQPIHVQSQ--------- 212
MDD +YY PP H YYQ P Q Q
Sbjct: 1 MDDMAAYYPPPSAHPPPPFPYYQPHPPPLGPPAPPPQQVAPPPPPPPPQQQPFLFPHQPP 60
Query: 213 ----FVYAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNN 380
YAPP+YPQ+S D++RTLF+AGLPEDVKPREIYNLFRE PGY+SS+LR P S N+
Sbjct: 61 PPPFASYAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSP-SQNS 119
Query: 381 Q 383
Q
Sbjct: 120 Q 120
>emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 219 YAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
YAPP+YPQ+S D++RTLF+AGLPEDVKPREIYNLFRE PGY+SS+LR P S N+Q
Sbjct: 64 YAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSP-SQNSQ 117
>emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/55 (76%), Positives = 50/55 (90%)
Frame = +3
Query: 219 YAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
YAPP+YPQ+S D++RTLF+AGLPEDVKPREIYNLFRE PGY+SS+LR P S N+Q
Sbjct: 64 YAPPLYPQTSVDEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSP-SQNSQ 117
>ref|XP_004231861.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
lycopersicum]
Length = 308
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +3
Query: 222 APPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
APP+YPQ S D +RTLF+AGLPEDVKPREIYNLFRE GY+SS+LR TSSN+Q
Sbjct: 49 APPLYPQDSHDDVRTLFIAGLPEDVKPREIYNLFREFAGYESSHLRSQTSSNSQ 102
>gb|EXB54173.1| RNA-binding protein with multiple splicing 2 [Morus notabilis]
Length = 322
Score = 87.8 bits (216), Expect = 1e-15
Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Frame = +3
Query: 75 MDDFTSYYAPPL------HHSYYQXXXXXXXXXXXXXXXXXXXXQPIHVQSQ--FVYAPP 230
MDD +YY PP H+ YYQ H Q Y P
Sbjct: 1 MDDMAAYYPPPPPLPAVPHYPYYQPPPPPPAAAAPPAAHQLAQPYAPHPQQPPYGAYTPS 60
Query: 231 IYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
+ S D++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR PT ++
Sbjct: 61 LVAPCSHDEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPTQAS 109
>ref|XP_004288011.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
vesca subsp. vesca]
Length = 327
Score = 86.7 bits (213), Expect = 3e-15
Identities = 49/106 (46%), Positives = 58/106 (54%), Gaps = 8/106 (7%)
Frame = +3
Query: 75 MDDFTSYYAPP------LHHSYYQXXXXXXXXXXXXXXXXXXXXQ--PIHVQSQFVYAPP 230
MDD +YY PP +H+SYY P YA P
Sbjct: 1 MDDMAAYYPPPPPPPGSVHYSYYHQPPPQPPPPVAPPPPHHLVQAYYPPQPPPYAPYAAP 60
Query: 231 IYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPT 368
+ QS+ D++RTLFVAGLPEDVK REIYNLFRE PGY+SS+LR PT
Sbjct: 61 LVAQSAYDEVRTLFVAGLPEDVKAREIYNLFREFPGYESSHLRTPT 106
>gb|ESW28770.1| hypothetical protein PHAVU_002G016600g [Phaseolus vulgaris]
Length = 337
Score = 85.1 bits (209), Expect = 9e-15
Identities = 52/117 (44%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Frame = +3
Query: 75 MDDFTSYYAPP------LHHSYYQXXXXXXXXXXXXXXXXXXXXQPI--HV--------Q 206
MDD +YY+ P +H YYQ P HV Q
Sbjct: 1 MDDMAAYYSQPQPAGLLTYHQYYQPPPPPPPPLMAVVPPPPGAVVPPAHHVHPPYVAQHQ 60
Query: 207 SQFVYAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
Q V+ PQ S +++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR PT+S+
Sbjct: 61 QQAVFGSYGSPQPSTNEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPTNSS 117
>ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/112 (43%), Positives = 61/112 (54%), Gaps = 12/112 (10%)
Frame = +3
Query: 75 MDDFTSYYAPPL-----------HHSYYQXXXXXXXXXXXXXXXXXXXXQPIHVQSQFVY 221
MDD TSYY PP H+ YYQ H + Y
Sbjct: 1 MDDMTSYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQ-------HPSTFASY 53
Query: 222 APPIYPQSSQ-DQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSS 374
A P+ P ++ +++RTLF+AGLPEDVKPREIYNLFRE PGY+SS+LR PT +
Sbjct: 54 ALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQT 105
>ref|XP_006339867.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X2
[Solanum tuberosum]
Length = 315
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +3
Query: 222 APPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
AP +YPQ S +RTLF+AGLPEDVKPREIYNLFRE GY+SS+LR TSSN+Q
Sbjct: 56 APLLYPQDSHGDVRTLFIAGLPEDVKPREIYNLFREFAGYESSHLRSQTSSNSQ 109
>ref|XP_006339866.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 83.2 bits (204), Expect = 3e-14
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +3
Query: 222 APPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSNNQ 383
AP +YPQ S +RTLF+AGLPEDVKPREIYNLFRE GY+SS+LR TSSN+Q
Sbjct: 56 APLLYPQDSHGDVRTLFIAGLPEDVKPREIYNLFREFAGYESSHLRSQTSSNSQ 109
>gb|EOX91506.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 233
Score = 82.4 bits (202), Expect = 6e-14
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Frame = +3
Query: 75 MDDFTSYYAPPL-----HHSYYQXXXXXXXXXXXXXXXXXXXXQ--PIHVQSQFV---YA 224
MDD +YY PP H+ YYQ P+ ++
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 225 PPIYP---------QSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
PP++P SS D +RTLF+AGLPED+KPREIYNLFRE PGY+SS+LR P S+
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPGYESSHLRNPNSAQ 120
Query: 378 N 380
N
Sbjct: 121 N 121
>gb|EOX91505.1| RNA-binding family protein isoform 2, partial [Theobroma cacao]
Length = 243
Score = 82.4 bits (202), Expect = 6e-14
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Frame = +3
Query: 75 MDDFTSYYAPPL-----HHSYYQXXXXXXXXXXXXXXXXXXXXQ--PIHVQSQFV---YA 224
MDD +YY PP H+ YYQ P+ ++
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 225 PPIYP---------QSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
PP++P SS D +RTLF+AGLPED+KPREIYNLFRE PGY+SS+LR P S+
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPGYESSHLRNPNSAQ 120
Query: 378 N 380
N
Sbjct: 121 N 121
>gb|EOX91504.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Frame = +3
Query: 75 MDDFTSYYAPPL-----HHSYYQXXXXXXXXXXXXXXXXXXXXQ--PIHVQSQFV---YA 224
MDD +YY PP H+ YYQ P+ ++
Sbjct: 1 MDDMAAYYPPPSGLLPPHYPYYQNPPPPPPPPALAPPPPPPPGATGPLPHPHSYIPQQQP 60
Query: 225 PPIYP---------QSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
PP++P SS D +RTLF+AGLPED+KPREIYNLFRE PGY+SS+LR P S+
Sbjct: 61 PPLFPCYSVPYVSACSSHDSVRTLFIAGLPEDIKPREIYNLFREFPGYESSHLRNPNSAQ 120
Query: 378 N 380
N
Sbjct: 121 N 121
>ref|XP_006590650.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X3
[Glycine max]
Length = 338
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Frame = +3
Query: 75 MDDFTSYYAPP-----LHHSYYQXXXXXXXXXXXXXXXXXXXX--------QPIHV---Q 206
MDD +YY+ P L + YYQ P +V Q
Sbjct: 1 MDDMAAYYSQPQPSGLLPYQYYQQPPPPPPPPMMAVVPPPPGAVVPPAHHLHPPYVAQHQ 60
Query: 207 SQFVYAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
Q V+ PQSS ++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR P++S+
Sbjct: 61 QQAVFGSYGAPQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSS 117
>ref|XP_006590649.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X2
[Glycine max]
Length = 339
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Frame = +3
Query: 75 MDDFTSYYAPP-----LHHSYYQXXXXXXXXXXXXXXXXXXXX--------QPIHV---Q 206
MDD +YY+ P L + YYQ P +V Q
Sbjct: 1 MDDMAAYYSQPQPSGLLPYQYYQQPPPPPPPPMMAVVPPPPGAVVPPAHHLHPPYVAQHQ 60
Query: 207 SQFVYAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
Q V+ PQSS ++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR P++S+
Sbjct: 61 QQAVFGSYGAPQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSS 117
>ref|XP_003539345.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform X1
[Glycine max]
Length = 338
Score = 81.3 bits (199), Expect = 1e-13
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 16/117 (13%)
Frame = +3
Query: 75 MDDFTSYYAPP-----LHHSYYQXXXXXXXXXXXXXXXXXXXX--------QPIHV---Q 206
MDD +YY+ P L + YYQ P +V Q
Sbjct: 1 MDDMAAYYSQPQPSGLLPYQYYQQPPPPPPPPMMAVVPPPPGAVVPPAHHLHPPYVAQHQ 60
Query: 207 SQFVYAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
Q V+ PQSS ++RTLFVAGLPEDVKPREIYNLFRE PGY+SS+LR P++S+
Sbjct: 61 QQAVFGSYGAPQSSTHEVRTLFVAGLPEDVKPREIYNLFREFPGYESSHLRSPSNSS 117
>ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein,
putative [Ricinus communis]
Length = 318
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/53 (69%), Positives = 43/53 (81%)
Frame = +3
Query: 219 YAPPIYPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
YAPP P + D +RTLFVAGLPEDV PREIYNLFRE PGY+SS+LR PT ++
Sbjct: 61 YAPPYVPYAGHDLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHLRTPTQTS 113
>ref|XP_004511897.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cicer
arietinum]
Length = 326
Score = 79.0 bits (193), Expect = 6e-13
Identities = 48/108 (44%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Frame = +3
Query: 75 MDDFTSYYA---PP--LHHSYYQXXXXXXXXXXXXXXXXXXXXQPIHVQSQFV--YAPPI 233
MDD +YY PP L + YY H Q Y P
Sbjct: 1 MDDMAAYYGQIQPPNLLTYHYYPPPPPQPPPPGASFPPAPHLHPQYHPQQHVFNYYGSP- 59
Query: 234 YPQSSQDQLRTLFVAGLPEDVKPREIYNLFRECPGYQSSNLRPPTSSN 377
P SS +++RTLF+AGLPEDVKPREIYNLFRE PGY+SS+LR P +S+
Sbjct: 60 -PLSSSNEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRSPNNSS 106