BLASTX nr result
ID: Rehmannia24_contig00022540
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00022540
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera] 92 5e-17
emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group] 59 1e-14
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo... 83 3e-14
gb|ADJ18449.1| gag/pol protein [Bryonia dioica] 83 4e-14
gb|ABA94768.1| transposon protein, putative, unclassified [Oryza... 59 5e-14
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera] 82 1e-13
gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis] 77 2e-12
gb|EXB36808.1| hypothetical protein L484_007870 [Morus notabilis] 77 2e-12
gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subc... 60 3e-12
pir||B47758 retrovirus-related reverse transcriptase homolog - P... 76 5e-12
dbj|BAB83561.1| reverse transcriptase [Silene dioica] 73 3e-11
gb|AGX45509.1| reverse transcriptase, partial [Prunus salicina] 72 1e-10
dbj|BAB83571.1| reverse transcriptase [Silene latifolia] 71 1e-10
dbj|BAB83560.1| reverse transcriptase [Silene dioica] 71 2e-10
dbj|BAB83565.1| reverse transcriptase [Silene dioica] 70 3e-10
gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabi... 69 5e-10
dbj|BAA02269.1| reverse transcriptase [Petroselinum crispum] 69 5e-10
dbj|BAB83564.1| reverse transcriptase [Silene dioica] 69 5e-10
dbj|BAB83585.1| reverse transcriptase [Silene armeria] 69 6e-10
dbj|BAB83552.1| reverse transcriptase [Silene coronaria] 69 8e-10
>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
Length = 668
Score = 92.4 bits (228), Expect = 5e-17
Identities = 49/93 (52%), Positives = 59/93 (63%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LEELL+DEI P PT VV + TT D PRRSGR IR PI YR+ E VA+ DG
Sbjct: 81 LEELLADEISPTPTTVVERQRKETTAQDLTPPPPRRSGREIRLPIRYRENGEAQVAVTDG 140
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
DDDPL+F+ M+D D +W EAM E++S S
Sbjct: 141 SDDDPLTFKMAMDDVDREKWQEAMKLEIESMYS 173
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV + QEQKVCKL RSIYGLK ASRSWN F+E IKSYGF+QN+ +P
Sbjct: 274 QPEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIIFNEAIKSYGFEQNLGEP 324
>emb|CAE04255.4| OSJNBa0089N06.16 [Oryza sativa Japonica Group]
Length = 1196
Score = 59.3 bits (142), Expect(2) = 1e-14
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNID 9
+P+ FV +G E C+L RSIYGLK ASR W +FD TIK +GF +N++
Sbjct: 859 QPKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFQENVE 907
Score = 45.8 bits (107), Expect(2) = 1e-14
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = -3
Query: 421 EELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIH--YR--QIEEENVAI 254
EEL +I P + + Q +P NV PRRS RV R I Y+ IEE ++
Sbjct: 737 EELQQPQIDNVPVQETHQEPQVQDVP--NVQAPRRSERVRRSAIRDDYKVYNIEESHM-- 792
Query: 253 FDGIDDDPLSFRQVMEDYDIARWLEAMDQEMDS 155
+DDP S+ + M + WLEAM EM+S
Sbjct: 793 ----EDDPTSYEEAMRSARSSEWLEAMKDEMES 821
>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
notabilis]
Length = 414
Score = 83.2 bits (204), Expect = 3e-14
Identities = 46/93 (49%), Positives = 56/93 (60%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LEELLSDEIRPQPTRVVG + Q T +PD +M PRRS RV R P Y E + D
Sbjct: 220 LEELLSDEIRPQPTRVVGPLRQKTIVPDQTLMAPRRSRRVSRLPDRY--TGEAQIVTADD 277
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
+DP +FR M+D + W AM E++S S
Sbjct: 278 GKEDPSTFRDAMDDSNKEEWQAAMKLEIESMHS 310
>gb|ADJ18449.1| gag/pol protein [Bryonia dioica]
Length = 1292
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE F+A+ QEQKVCKL +SIYGLK ASRSWN RFD IKSYGF+QN+D+P
Sbjct: 934 QPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEP 984
>gb|ABA94768.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1144
Score = 59.3 bits (142), Expect(2) = 5e-14
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNID 9
+P+ FV +G E C+L RSIYGLK ASR W +FD TIK +GF +N++
Sbjct: 766 QPKGFVMKGNENMGCRLKRSIYGLKQASRQWYLKFDGTIKKFGFQENVE 814
Score = 43.5 bits (101), Expect(2) = 5e-14
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = -3
Query: 421 EELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIH--YR--QIEEENVAI 254
EEL +I P + + Q +P N+ PRRS RV R I Y+ IEE ++
Sbjct: 644 EELQQPQIDNVPVQETQQEPQVQDVP--NMQAPRRSERVRRSAIRDDYKIYNIEESHM-- 699
Query: 253 FDGIDDDPLSFRQVMEDYDIARWLEAMDQEMDS 155
+DDP S+ + M + WLEAM EM S
Sbjct: 700 ----EDDPTSYEEAMRSARSSEWLEAMKDEMKS 728
>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
Length = 961
Score = 81.6 bits (200), Expect = 1e-13
Identities = 46/93 (49%), Positives = 55/93 (59%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LEELL+DEI P PT VV + TT D PR SGR IR PI Y + E VA+ DG
Sbjct: 517 LEELLADEISPTPTTVVERQRKETTARDLTPPPPRCSGREIRLPIRYCENGEAQVAVTDG 576
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
DDD L+F+ M+D D W EAM E++S S
Sbjct: 577 SDDDSLTFKMAMDDVDRETWQEAMKLEIESMYS 609
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSY 30
+ E FV + QEQKVCKL RSIYGLK ASRSWN RF E IKSY
Sbjct: 710 QSEGFVVKDQEQKVCKLQRSIYGLKQASRSWNIRFSEAIKSY 751
>gb|EXC27156.1| hypothetical protein L484_000603 [Morus notabilis]
Length = 246
Score = 77.4 bits (189), Expect = 2e-12
Identities = 44/93 (47%), Positives = 53/93 (56%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LEELLSDEI PQPTRVVG + + TT+PD PRRSGRV P Y E + D
Sbjct: 124 LEELLSDEIGPQPTRVVGPLREKTTVPDQIPKAPRRSGRVSILPDRYN--GEAQIVTADD 181
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
+DP +F+ M+D D W M EM+S S
Sbjct: 182 GKEDPSTFKDAMDDSDKEEWQVTMKLEMESMYS 214
>gb|EXB36808.1| hypothetical protein L484_007870 [Morus notabilis]
Length = 145
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/93 (46%), Positives = 52/93 (55%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LEELLSDEI P PTRVVG + + TT+PD P RSGRV P Y E + D
Sbjct: 52 LEELLSDEIGPHPTRVVGPLREKTTVPDQTPKAPHRSGRVSMLPDRY--TGEAQIVTTDD 109
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
+DP +F+ M+D D W AM EM+S S
Sbjct: 110 GKEDPSTFKDAMDDSDKEEWQAAMKLEMESMHS 142
>gb|ABA94675.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 815
Score = 60.5 bits (145), Expect(2) = 3e-12
Identities = 27/50 (54%), Positives = 37/50 (74%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDK 6
+P+ FV EG+EQ C L +SIYGLK ASR W +FDE I+ +GF++N +K
Sbjct: 704 QPKGFVVEGKEQMGCHLKKSIYGLKQASRQWYLKFDEVIRRFGFNENEEK 753
Score = 36.6 bits (83), Expect(2) = 3e-12
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPI--HYRQIEEENVAIF 251
LEE EI+ P +VV + + V RRS R R I Y+ + V
Sbjct: 583 LEEKREPEIQDPPEQVVTQEEEQHQPQIDEVPQLRRSERERRTTITSDYQVYASKEVQT- 641
Query: 250 DGIDDDPLSFRQVMEDYDIARWLEAMDQEMDS 155
+ DP SF +VM ++WLEAM EM S
Sbjct: 642 ---EGDPTSFEEVMRSAHSSKWLEAMKDEMRS 670
>pir||B47758 retrovirus-related reverse transcriptase homolog - Platanus
occidentalis retrotransposon copia-like (fragment)
gi|169643|gb|AAA33850.1| reverse transcriptase, partial
[Platanus occidentalis]
Length = 88
Score = 75.9 bits (185), Expect = 5e-12
Identities = 35/51 (68%), Positives = 42/51 (82%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+P+ FV GQE KVCKL RSIYGLK ASRSWN RFD+ IKS+GF+QN ++P
Sbjct: 17 QPKGFVYPGQESKVCKLERSIYGLKQASRSWNIRFDQAIKSFGFEQNPEEP 67
>dbj|BAB83561.1| reverse transcriptase [Silene dioica]
Length = 92
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL +SIYGLK ASRSWNHRFD IK YGF +N+++P
Sbjct: 21 QPEGFVDTSNPKKVCKLKKSIYGLKQASRSWNHRFDHVIKKYGFTKNVEEP 71
>gb|AGX45509.1| reverse transcriptase, partial [Prunus salicina]
Length = 88
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/51 (64%), Positives = 40/51 (78%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE F+++ + KVCKL RSIYGLK ASRSWN RFDE IKS+ F QN D+P
Sbjct: 16 QPEGFISKTESHKVCKLQRSIYGLKQASRSWNLRFDEAIKSFDFSQNGDEP 66
>dbj|BAB83571.1| reverse transcriptase [Silene latifolia]
Length = 92
Score = 71.2 bits (173), Expect = 1e-10
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL +SIYGLK ASRSWNHRFD IK YGF +++++P
Sbjct: 21 QPEGFVDTSNPKKVCKLKKSIYGLKQASRSWNHRFDHVIKQYGFTRSVEEP 71
>dbj|BAB83560.1| reverse transcriptase [Silene dioica]
Length = 92
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL +SIYGLK ASRSWNHRFD IK YGF +++++P
Sbjct: 21 QPEGFVDTSNPKKVCKLKKSIYGLKQASRSWNHRFDHIIKQYGFTRSVEEP 71
>dbj|BAB83565.1| reverse transcriptase [Silene dioica]
Length = 92
Score = 70.1 bits (170), Expect = 3e-10
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL +SIYGLK ASRSWNHRFD IK YGF +++++P
Sbjct: 21 QPEGFVDTSNLKKVCKLKKSIYGLKQASRSWNHRFDHIIKQYGFTRSVEEP 71
>gb|EXB94191.1| Serine/threonine-protein kinase ATM [Morus notabilis]
Length = 1438
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/93 (43%), Positives = 57/93 (61%)
Frame = -3
Query: 424 LEELLSDEIRPQPTRVVGEIAQNTTIPD*NVMTPRRSGRVIRPPIHYRQIEEENVAIFDG 245
LE+LL ++I PQPTRVV + TTIP+ + RSGRV + P Y E + V + DG
Sbjct: 1316 LEKLLFNKIGPQPTRVVRTLRDKTTIPNQTPLARHRSGRVSKLPNRYTG-EAQIVTVDDG 1374
Query: 244 IDDDPLSFRQVMEDYDIARWLEAMDQEMDSNQS 146
+DPL+F+ M+D+D +W AM E++S S
Sbjct: 1375 -KEDPLTFKAAMDDFDKEKWQAAMKLEIESMYS 1406
>dbj|BAA02269.1| reverse transcriptase [Petroselinum crispum]
Length = 81
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/51 (60%), Positives = 40/51 (78%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV+ G E +CKL R+IYGL+ ASR WN RFDETIK +GF +N+D+P
Sbjct: 15 QPEGFVSIGNEHLICKLLRTIYGLRQASRRWNIRFDETIKEFGFIKNLDEP 65
>dbj|BAB83564.1| reverse transcriptase [Silene dioica]
Length = 92
Score = 69.3 bits (168), Expect = 5e-10
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE F+ +KVCKL RSIYGLK ASRSWNH FD+ IK YGF +++++P
Sbjct: 21 QPEGFIDPEHPKKVCKLKRSIYGLKQASRSWNHPFDQVIKEYGFTRSVEEP 71
>dbj|BAB83585.1| reverse transcriptase [Silene armeria]
Length = 91
Score = 68.9 bits (167), Expect = 6e-10
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL RSIYGLK ASRSWNHRFD IK GF +++++P
Sbjct: 20 QPERFVDTSSPKKVCKLKRSIYGLKQASRSWNHRFDHVIKQNGFTRSVEEP 70
>dbj|BAB83552.1| reverse transcriptase [Silene coronaria]
Length = 92
Score = 68.6 bits (166), Expect = 8e-10
Identities = 31/51 (60%), Positives = 38/51 (74%)
Frame = -2
Query: 155 EPECFVAEGQEQKVCKLPRSIYGLK*ASRSWNHRFDETIKSYGFDQNIDKP 3
+PE FV +KVCKL RSIYGLK ASRSWNHRFD IK GF +++++P
Sbjct: 21 QPEGFVDTSNPKKVCKLKRSIYGLKQASRSWNHRFDHVIKQNGFARSVEEP 71