BLASTX nr result
ID: Rehmannia24_contig00020918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00020918
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEK71643.1| hypothetical chloroplast RF1 [Meliosma aff. cunei... 73 5e-11
gb|AEK71575.1| hypothetical chloroplast RF1 [Spiraea tomentosa] 73 5e-11
gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Mo... 73 5e-11
gb|AHE41713.1| Ycf1, partial (chloroplast) [Parnassia laxmannii] 72 8e-11
ref|YP_001294329.1| hypothetical chloroplast RF1 [Illicium oliga... 72 8e-11
ref|YP_001294317.1| hypothetical chloroplast RF1 [Illicium oliga... 72 8e-11
gb|AEX93995.1| hypothetical chloroplast RF19 (chloroplast) [Eche... 72 1e-10
ref|YP_008081412.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10
ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10
ref|YP_004841843.1| hypothetical chloroplast RF19 [Cucumis melo ... 71 1e-10
ref|YP_004841831.1| hypothetical chloroplast RF19-like protein [... 71 1e-10
gb|AEK71755.1| hypothetical chloroplast RF1 [Ficus sp. M. J. Moo... 71 1e-10
gb|AEK71734.1| hypothetical chloroplast RF1 [Oxalis latifolia] 71 1e-10
gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron arali... 71 1e-10
ref|YP_004072518.1| hypothetical protein ColaC_p079 [Corynocarpu... 71 1e-10
ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [... 71 1e-10
gb|ADD30920.1| putative RF1 protein [Oxalis latifolia] 71 1e-10
gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315] 71 1e-10
emb|CAP62556.1| ycf1 [Ceratophyllum demersum] 71 1e-10
ref|YP_001542505.1| hypothetical chloroplast RF1 [Ceratophyllum ... 71 1e-10
>gb|AEK71643.1| hypothetical chloroplast RF1 [Meliosma aff. cuneifolia M. J. Moore
333]
Length = 420
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT F+G SY+ L RVMEEGTEK+VSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFFIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPL 80
>gb|AEK71575.1| hypothetical chloroplast RF1 [Spiraea tomentosa]
Length = 246
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/51 (68%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYYV L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYVPL 80
>gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Moore 333]
Length = 1894
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT F+G SY+ L RVMEEGTEK+VSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFFIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYAPL 80
>gb|AHE41713.1| Ycf1, partial (chloroplast) [Parnassia laxmannii]
Length = 193
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 10 GFLTTFSIGPSYIFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 60
>ref|YP_001294329.1| hypothetical chloroplast RF1 [Illicium oligandrum]
gi|182702252|sp|A6MN03.1|YCF1_ILLOL RecName:
Full=Putative membrane protein ycf1
gi|147917454|gb|ABQ52578.1| hypothetical chloroplast RF1
[Illicium oligandrum]
Length = 1882
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEK+VSA +GFITG+F+MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQFMMFISIYYAPL 80
>ref|YP_001294317.1| hypothetical chloroplast RF1 [Illicium oligandrum]
gi|147917442|gb|ABQ52566.1| hypothetical chloroplast RF1
[Illicium oligandrum]
Length = 140
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEK+VSA +GFITG+F+MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQFMMFISIYYAPL 80
>gb|AEX93995.1| hypothetical chloroplast RF19 (chloroplast) [Echeandia sp. Steele
1101]
Length = 1724
Score = 71.6 bits (174), Expect = 1e-10
Identities = 36/71 (50%), Positives = 50/71 (70%), Gaps = 7/71 (9%)
Frame = -2
Query: 328 LGNLMLLRFQSEL-------GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRF 170
LGNL+ ++ + + GFLTT +G SY++L RV+EEGTEK+VSA +GFITG+
Sbjct: 8 LGNLLCMKIINSVVVVGLYYGFLTTFSIGPSYLLLLRARVLEEGTEKEVSATTGFITGQL 67
Query: 169 VMFVSIYYVTL 137
+MF+SIYY L
Sbjct: 68 MMFISIYYAPL 78
>ref|YP_008081412.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279273|gb|AGJ72127.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 378
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>ref|YP_008081424.1| hypothetical chloroplast RF1 (chloroplast) [Tetracentron sinense]
gi|479279261|gb|AGJ72115.1| hypothetical chloroplast RF1
(chloroplast) [Tetracentron sinense]
Length = 1895
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>ref|YP_004841843.1| hypothetical chloroplast RF19 [Cucumis melo subsp. melo]
gi|344030552|gb|AEM76953.1| hypothetical chloroplast
RF19 [Cucumis melo subsp. melo]
Length = 1865
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>ref|YP_004841831.1| hypothetical chloroplast RF19-like protein [Cucumis melo subsp.
melo] gi|344030540|gb|AEM76941.1| hypothetical
chloroplast RF19-like protein [Cucumis melo subsp. melo]
Length = 407
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>gb|AEK71755.1| hypothetical chloroplast RF1 [Ficus sp. M. J. Moore 315]
Length = 315
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>gb|AEK71734.1| hypothetical chloroplast RF1 [Oxalis latifolia]
Length = 336
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>gb|AEK71687.1| hypothetical chloroplast RF1 [Trochodendron aralioides]
Length = 478
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>ref|YP_004072518.1| hypothetical protein ColaC_p079 [Corynocarpus laevigata]
gi|309252946|gb|ADO60366.1| hypothetical protein
[Corynocarpus laevigata]
Length = 1852
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>ref|YP_008081515.1| hypothetical chloroplast RF1 (chloroplast) [Trochodendron
aralioides] gi|290489080|gb|ADD30924.1| putative RF1
protein [Trochodendron aralioides]
gi|479279354|gb|AGJ72207.1| hypothetical chloroplast RF1
(chloroplast) [Trochodendron aralioides]
Length = 1896
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>gb|ADD30920.1| putative RF1 protein [Oxalis latifolia]
Length = 1876
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>gb|ADD30916.1| putative RF1 protein [Ficus sp. Moore 315]
Length = 1877
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEKKVSA +GFITG+ +MF+SIYY L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKKVSATTGFITGQLMMFISIYYAPL 80
>emb|CAP62556.1| ycf1 [Ceratophyllum demersum]
Length = 1898
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEK+VSA +GFITG+ +MF+SIYYV L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYVPL 80
>ref|YP_001542505.1| hypothetical chloroplast RF1 [Ceratophyllum demersum]
gi|182702242|sp|A8SEG5.1|YCF1_CERDE RecName:
Full=Putative membrane protein ycf1; Short=RF1
gi|148508502|gb|ABQ81509.1| hypothetical chloroplast RF1
[Ceratophyllum demersum]
Length = 1899
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 289 GFLTTLFVGASYVVLRLVRVMEEGTEKKVSAISGFITGRFVMFVSIYYVTL 137
GFLTT +G SY+ L RVMEEGTEK+VSA +GFITG+ +MF+SIYYV L
Sbjct: 30 GFLTTFSIGPSYLFLLRARVMEEGTEKEVSATTGFITGQLMMFISIYYVPL 80