BLASTX nr result

ID: Rehmannia24_contig00020842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00020842
         (374 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS67387.1| hypothetical protein M569_07378 [Genlisea aurea]        81   2e-13
ref|XP_004249845.1| PREDICTED: LOW QUALITY PROTEIN: protein tran...    75   1e-11
ref|XP_006351128.1| PREDICTED: protein translocase subunit SECA2...    74   2e-11
ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...    55   1e-05

>gb|EPS67387.1| hypothetical protein M569_07378 [Genlisea aurea]
          Length = 1757

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 40/90 (44%), Positives = 63/90 (70%)
 Frame = -2

Query: 274 VLREKEDVGLVKVGIFVEGEEDSKLFKSSYESSIVTVLCGMKEVERDELEIILNVTLRVS 95
           VLR+++++ LV++G+  +G  +S  F+ SYES I+  L  M+E ER++L  +LN TL+V+
Sbjct: 161 VLRDEQELSLVRIGVLSQGGLNS--FRRSYESRILMFLSSMEEEERNKLVKLLNATLKVN 218

Query: 94  NVGKAYGFWYNEDDKCVYIVWQKFNSPNLM 5
           N+ KA G WYNED   VY+V+ K +S  L+
Sbjct: 219 NIVKACGLWYNEDGNGVYVVFPKLDSAKLI 248


>ref|XP_004249845.1| PREDICTED: LOW QUALITY PROTEIN: protein translocase subunit SECA2,
           chloroplastic-like [Solanum lycopersicum]
          Length = 1855

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 39/88 (44%), Positives = 57/88 (64%)
 Frame = -2

Query: 283 MGFVLREKEDVGLVKVGIFVEGEEDSKLFKSSYESSIVTVLCGMKEVERDELEIILNVTL 104
           MG VL+E E V L+++G F +G    K F+ SYE  +++VL G+ E ER ELE I+  +L
Sbjct: 155 MGCVLKEGEKVSLLEIGYFAKGSCSCK-FEYSYEVKLMSVLYGLSEGERTELESIIKASL 213

Query: 103 RVSNVGKAYGFWYNEDDKCVYIVWQKFN 20
            +  + K YGFWYN D+  VY+V + F+
Sbjct: 214 ALHVMCKVYGFWYNTDNHYVYMVSEAFS 241


>ref|XP_006351128.1| PREDICTED: protein translocase subunit SECA2, chloroplastic-like
           isoform X3 [Solanum tuberosum]
          Length = 1844

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 38/88 (43%), Positives = 56/88 (63%)
 Frame = -2

Query: 283 MGFVLREKEDVGLVKVGIFVEGEEDSKLFKSSYESSIVTVLCGMKEVERDELEIILNVTL 104
           MG  L+E E V L+++G F +G    K F+ SYE  +++VL G+ E  R ELE I+  +L
Sbjct: 155 MGCALKEGEKVSLLEIGYFAKGSCSYK-FEYSYEVKLMSVLYGLSEGGRTELESIIKASL 213

Query: 103 RVSNVGKAYGFWYNEDDKCVYIVWQKFN 20
            +  + K YGFWYN D+ CVY+V + F+
Sbjct: 214 ALHVMCKVYGFWYNMDNHCVYMVSEAFS 241


>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540534|gb|EEF42101.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 1794

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/61 (40%), Positives = 38/61 (62%)
 Frame = -2

Query: 202 LFKSSYESSIVTVLCGMKEVERDELEIILNVTLRVSNVGKAYGFWYNEDDKCVYIVWQKF 23
           +FK SY S I+  L G+  V R+EL +IL + L    +GK YGFW +  +  +Y+V ++F
Sbjct: 156 IFKLSYASRIMNCLYGLGNVVREELSLILGICLEHYRIGKFYGFWCDSQNGFLYLVCERF 215

Query: 22  N 20
           N
Sbjct: 216 N 216


Top