BLASTX nr result

ID: Rehmannia24_contig00020777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00020777
         (363 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS69668.1| hypothetical protein M569_05098 [Genlisea aurea]       118   9e-25
ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotei...   107   2e-21
ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanu...   105   8e-21
gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus...   103   2e-20
ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotei...   103   2e-20
ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotei...   103   3e-20
ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotei...   102   4e-20
gb|ACU24174.1| unknown [Glycine max]                                  102   4e-20
gb|ABK22144.1| unknown [Picea sitchensis]                             102   4e-20
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              102   5e-20
ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   102   5e-20
gb|AFK36658.1| unknown [Medicago truncatula]                          102   7e-20
gb|ADE76200.1| unknown [Picea sitchensis] gi|294464400|gb|ADE777...   102   7e-20
gb|ACJ84781.1| unknown [Medicago truncatula]                          102   7e-20
ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycin...    99   4e-19
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...    99   8e-19
ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc...    99   8e-19
ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarp...    99   8e-19
ref|XP_006828170.1| hypothetical protein AMTR_s00023p00113610 [A...    97   2e-18
ref|XP_006468132.1| PREDICTED: U2 small nuclear ribonucleoprotei...    97   3e-18

>gb|EPS69668.1| hypothetical protein M569_05098 [Genlisea aurea]
          Length = 237

 Score =  118 bits (295), Expect = 9e-25
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLFSQC GFKEVRMVEAKPGIAF+EYENEMQSTVAMQGLQGFKITDD+PMLITYAKK
Sbjct: 178 MLQMLFSQCQGFKEVRMVEAKPGIAFIEYENEMQSTVAMQGLQGFKITDDHPMLITYAKK 237


>ref|XP_004247411.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Solanum
           lycopersicum]
          Length = 253

 Score =  107 bits (266), Expect = 2e-21
 Identities = 53/60 (88%), Positives = 55/60 (91%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAF+EY +EMQSTVAMQ LQGFKIT DNPMLITYAKK
Sbjct: 194 MLQMLFCQYPGFKEVRMVEAKPGIAFIEYGDEMQSTVAMQALQGFKITADNPMLITYAKK 253


>ref|NP_001274791.1| uncharacterized protein LOC102601989 [Solanum tuberosum]
           gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A
           [Solanum tuberosum]
          Length = 253

 Score =  105 bits (261), Expect = 8e-21
 Identities = 51/60 (85%), Positives = 55/60 (91%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRM+EAKPGIAF+EY +EMQSTVAMQ LQGFKIT +NPMLITYAKK
Sbjct: 194 MLQMLFCQYPGFKEVRMIEAKPGIAFIEYGDEMQSTVAMQALQGFKITAENPMLITYAKK 253


>gb|ESW19238.1| hypothetical protein PHAVU_006G108000g [Phaseolus vulgaris]
          Length = 241

 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVE KPGIAFVEY +EMQSTVAMQ LQGFKIT  NPMLITYAKK
Sbjct: 182 MLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQSLQGFKITPQNPMLITYAKK 241


>ref|XP_004494379.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cicer
           arietinum]
          Length = 241

 Score =  103 bits (257), Expect = 2e-20
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVE KPGIAFVEY +EMQSTVAMQ LQGFKIT  NPMLITYAKK
Sbjct: 182 MLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQALQGFKITPQNPMLITYAKK 241


>ref|XP_004290803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Fragaria
           vesca subsp. vesca]
          Length = 244

 Score =  103 bits (256), Expect = 3e-20
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEYENEMQST+AMQ LQ FK+T  N MLITYAKK
Sbjct: 185 MLQMLFCQYPGFKEVRMVEAKPGIAFVEYENEMQSTMAMQNLQAFKVTPQNSMLITYAKK 244


>ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
          Length = 241

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVE KPGIAFVEY +EMQSTVAMQ LQGFKIT  NPMLITYAKK
Sbjct: 182 MLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241


>gb|ACU24174.1| unknown [Glycine max]
          Length = 241

 Score =  102 bits (255), Expect = 4e-20
 Identities = 52/60 (86%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVE KPGIAFVEY +EMQSTVAMQ LQGFKIT  NPMLITYAKK
Sbjct: 182 MLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQGFKITPQNPMLITYAKK 241


>gb|ABK22144.1| unknown [Picea sitchensis]
          Length = 235

 Score =  102 bits (255), Expect = 4e-20
 Identities = 50/60 (83%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRM+EAKPGIAFVEY +EMQ++VAMQ LQGFKIT  NPMLITYAKK
Sbjct: 176 MLQMLFQQYPGFKEVRMIEAKPGIAFVEYGDEMQASVAMQALQGFKITPQNPMLITYAKK 235


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  102 bits (254), Expect = 5e-20
 Identities = 51/60 (85%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQM F Q PGFKEVRMVEAKPGIAFVEY +EMQSTVAMQGLQG KI   NPMLITYAKK
Sbjct: 173 MLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 232


>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  102 bits (254), Expect = 5e-20
 Identities = 51/60 (85%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQM F Q PGFKEVRMVEAKPGIAFVEY +EMQSTVAMQGLQG KI   NPMLITYAKK
Sbjct: 186 MLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLKINQQNPMLITYAKK 245


>gb|AFK36658.1| unknown [Medicago truncatula]
          Length = 232

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEY +EMQST+AMQ LQGFKI   NPMLITYAKK
Sbjct: 173 MLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 232


>gb|ADE76200.1| unknown [Picea sitchensis] gi|294464400|gb|ADE77712.1| unknown
           [Picea sitchensis]
          Length = 241

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q  GFKEVRM+EAKPGIAFVEY +EMQSTVAMQ LQGFKIT  NPMLITYAKK
Sbjct: 182 MLQMLFCQYHGFKEVRMIEAKPGIAFVEYADEMQSTVAMQALQGFKITPQNPMLITYAKK 241


>gb|ACJ84781.1| unknown [Medicago truncatula]
          Length = 245

 Score =  102 bits (253), Expect = 7e-20
 Identities = 51/60 (85%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEY +EMQST+AMQ LQGFKI   NPMLITYAKK
Sbjct: 186 MLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTMAMQALQGFKIAPQNPMLITYAKK 245


>ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
           gi|255628437|gb|ACU14563.1| unknown [Glycine max]
          Length = 241

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 51/60 (85%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVE KPGIAFVEY +EMQSTVAMQ LQ FKIT  NPMLITYAKK
Sbjct: 182 MLQMLFLQYPGFKEVRMVETKPGIAFVEYGDEMQSTVAMQTLQCFKITPQNPMLITYAKK 241


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/60 (81%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEY +E+QSTVAMQ LQGFK+   N MLITYAKK
Sbjct: 183 MLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 242


>ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
           A-like [Cucumis sativus]
          Length = 248

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/60 (81%), Positives = 52/60 (86%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEY +E+QSTVAMQ LQGFK+   N MLITYAKK
Sbjct: 189 MLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFKMNPQNSMLITYAKK 248


>ref|XP_002320337.2| SPLICEOSOMAL protein U1A [Populus trichocarpa]
           gi|118485733|gb|ABK94716.1| unknown [Populus
           trichocarpa] gi|550324046|gb|EEE98652.2| SPLICEOSOMAL
           protein U1A [Populus trichocarpa]
          Length = 254

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 50/60 (83%), Positives = 51/60 (85%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGIAFVEY +EMQST AM GLQGFKI   N MLITYAKK
Sbjct: 195 MLQMLFQQYPGFKEVRMVEAKPGIAFVEYGDEMQSTGAMHGLQGFKILQQNSMLITYAKK 254


>ref|XP_006828170.1| hypothetical protein AMTR_s00023p00113610 [Amborella trichopoda]
           gi|548832817|gb|ERM95586.1| hypothetical protein
           AMTR_s00023p00113610 [Amborella trichopoda]
          Length = 234

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           MLQMLF Q PGFKEVRMVEAKPGI+FVEY +E+Q+++AMQ LQGFKIT  NPM ITYAKK
Sbjct: 175 MLQMLFQQYPGFKEVRMVEAKPGISFVEYADEIQASIAMQALQGFKITPQNPMGITYAKK 234


>ref|XP_006468132.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Citrus
           sinensis]
          Length = 231

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 45/60 (75%), Positives = 54/60 (90%)
 Frame = +3

Query: 3   MLQMLFSQCPGFKEVRMVEAKPGIAFVEYENEMQSTVAMQGLQGFKITDDNPMLITYAKK 182
           ML+MLF Q PGFKEVRM+EAKPGIAFVE+E+++QS++AMQ LQGFKIT  NPM IT+AKK
Sbjct: 172 MLEMLFQQYPGFKEVRMIEAKPGIAFVEFEDDVQSSMAMQALQGFKITPQNPMAITFAKK 231


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