BLASTX nr result
ID: Rehmannia24_contig00020584
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00020584
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324390.2| hypothetical protein POPTR_0018s03610g [Popu... 66 4e-09
ref|XP_006845609.1| hypothetical protein AMTR_s00019p00209010 [A... 65 7e-09
gb|EOY29220.1| Ribosomal L28 family, putative [Theobroma cacao] 65 9e-09
ref|XP_006450181.1| hypothetical protein CICLE_v10009422mg [Citr... 63 4e-08
gb|EPS72501.1| hypothetical protein M569_02258, partial [Genlise... 62 6e-08
ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212... 62 6e-08
ref|XP_004245117.1| PREDICTED: uncharacterized protein LOC101264... 62 1e-07
ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial pre... 61 2e-07
ref|XP_006355319.1| PREDICTED: 54S ribosomal protein L24, mitoch... 60 2e-07
ref|XP_004291293.1| PREDICTED: 39S ribosomal protein L28, mitoch... 59 7e-07
gb|AFK38646.1| unknown [Lotus japonicus] 59 7e-07
gb|AFK45117.1| unknown [Lotus japonicus] 59 9e-07
ref|XP_003588460.1| 50S ribosomal protein L28 [Medicago truncatu... 58 1e-06
ref|XP_004498490.1| PREDICTED: 54S ribosomal protein L24, mitoch... 57 2e-06
ref|XP_006412588.1| hypothetical protein EUTSA_v10026230mg [Eutr... 56 6e-06
ref|XP_006284519.1| hypothetical protein CARUB_v10005720mg [Caps... 55 1e-05
gb|EMJ27291.1| hypothetical protein PRUPE_ppa010814mg [Prunus pe... 55 1e-05
ref|XP_002867301.1| ribosomal protein L28 family protein [Arabid... 55 1e-05
ref|NP_194874.1| ribosomal L28 family protein [Arabidopsis thali... 55 1e-05
>ref|XP_002324390.2| hypothetical protein POPTR_0018s03610g [Populus trichocarpa]
gi|550317955|gb|EEF02955.2| hypothetical protein
POPTR_0018s03610g [Populus trichocarpa]
Length = 229
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/50 (68%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE+NLAPGVKE LKK+ N KVVM +A+RG AG IQFG+ +SEDGGNK
Sbjct: 18 GEKNLAPGVKEALKKAIPNSKVVMNRAKRGLFAGRHIQFGNQISEDGGNK 67
>ref|XP_006845609.1| hypothetical protein AMTR_s00019p00209010 [Amborella trichopoda]
gi|548848181|gb|ERN07284.1| hypothetical protein
AMTR_s00019p00209010 [Amborella trichopoda]
Length = 223
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTT-NKVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G++N APGVKE LKK NKVVMG+A+RG AG IQFG+ VSEDGGNK
Sbjct: 17 GDENFAPGVKESLKKYLPDNKVVMGRAKRGLYAGRHIQFGNQVSEDGGNK 66
>gb|EOY29220.1| Ribosomal L28 family, putative [Theobroma cacao]
Length = 258
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE NLAPGVKEQLKK + KVVM +A+RG AG IQFG+ +SEDGGNK
Sbjct: 17 GENNLAPGVKEQLKKCIPDSKVVMNRAKRGLYAGRHIQFGNRISEDGGNK 66
>ref|XP_006450181.1| hypothetical protein CICLE_v10009422mg [Citrus clementina]
gi|568860087|ref|XP_006483558.1| PREDICTED: 54S
ribosomal protein L24, mitochondrial-like [Citrus
sinensis] gi|557553407|gb|ESR63421.1| hypothetical
protein CICLE_v10009422mg [Citrus clementina]
Length = 222
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/50 (64%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE+NLAPGVKE LKK + ++VM +A+RG AG IQFG+ VSEDGGNK
Sbjct: 18 GEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNK 67
>gb|EPS72501.1| hypothetical protein M569_02258, partial [Genlisea aurea]
Length = 179
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/49 (65%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Frame = +1
Query: 310 EQNLAPGVKEQLKKSTTNK-VVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
E +LAPGVK+QLKK +K +VMG+AQRG AG IQFG+ +SEDGGNK
Sbjct: 19 EHDLAPGVKDQLKKWLPDKKIVMGRAQRGLYAGKHIQFGNRISEDGGNK 67
>ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212331 [Cucumis sativus]
gi|449528875|ref|XP_004171427.1| PREDICTED:
uncharacterized LOC101212331 [Cucumis sativus]
Length = 221
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE NLAPGVK+ LKK + K+VMG+A RG AG I+FG+ VSEDGGNK
Sbjct: 17 GENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRVSEDGGNK 66
>ref|XP_004245117.1| PREDICTED: uncharacterized protein LOC101264655 isoform 1 [Solanum
lycopersicum] gi|460399177|ref|XP_004245118.1|
PREDICTED: uncharacterized protein LOC101264655 isoform
2 [Solanum lycopersicum]
Length = 211
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/49 (67%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGN 450
GE+NLA GVKE+L+K N KVVMG+AQRG AG IQFG+ VSE GGN
Sbjct: 18 GEKNLASGVKERLEKCVPNAKVVMGRAQRGLFAGRHIQFGNRVSEKGGN 66
>ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial precursor, putative
[Ricinus communis] gi|223533093|gb|EEF34852.1| 60S
ribosomal protein L24, mitochondrial precursor, putative
[Ricinus communis]
Length = 211
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/50 (64%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G+ NL+P VKE LKK + KVVMG+A+RG AG IQFG+ VSEDGGNK
Sbjct: 17 GDNNLSPEVKESLKKCMPDSKVVMGRAKRGIFAGRHIQFGNRVSEDGGNK 66
>ref|XP_006355319.1| PREDICTED: 54S ribosomal protein L24, mitochondrial-like [Solanum
tuberosum]
Length = 211
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/49 (65%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGN 450
GE+NLA GVK++L+K N KVVMG+AQRG AG IQFG+ VSE GGN
Sbjct: 18 GEKNLASGVKQRLEKCVPNAKVVMGRAQRGLFAGRHIQFGNRVSEKGGN 66
>ref|XP_004291293.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Fragaria
vesca subsp. vesca]
Length = 221
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN--KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G++NL P +K++LKK+ K+VMG+AQRG AG IQFG+ VSEDGGNK
Sbjct: 17 GDKNLNPRLKQELKKNRLPDPKIVMGRAQRGIFAGRHIQFGNNVSEDGGNK 67
>gb|AFK38646.1| unknown [Lotus japonicus]
Length = 235
Score = 58.9 bits (141), Expect = 7e-07
Identities = 30/50 (60%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE+NL P KE L+K K+VMG+A+RG AG IQFG+ VSEDGGNK
Sbjct: 17 GEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVSEDGGNK 66
>gb|AFK45117.1| unknown [Lotus japonicus]
Length = 235
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE+NL+P KE L+K K+VMG+A+RG AG IQFG+ VSEDGGNK
Sbjct: 17 GEKNLSPKSKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVSEDGGNK 66
>ref|XP_003588460.1| 50S ribosomal protein L28 [Medicago truncatula]
gi|355477508|gb|AES58711.1| 50S ribosomal protein L28
[Medicago truncatula]
Length = 232
Score = 58.2 bits (139), Expect = 1e-06
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKK-STTNKVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G++NL P KE ++K NKVVMG+A+RG AG IQFG+ VSEDGGN+
Sbjct: 17 GDKNLTPRAKESIEKWLPKNKVVMGRAKRGLFAGKHIQFGNSVSEDGGNR 66
>ref|XP_004498490.1| PREDICTED: 54S ribosomal protein L24, mitochondrial-like [Cicer
arietinum]
Length = 235
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/50 (56%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTT-NKVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
GE+N+ P +K+ L+KS +K+VM +A+RG AG IQFG+ VSEDGGNK
Sbjct: 17 GEKNMTPRLKQSLEKSLPKSKIVMNRAKRGLFAGKHIQFGNSVSEDGGNK 66
>ref|XP_006412588.1| hypothetical protein EUTSA_v10026230mg [Eutrema salsugineum]
gi|557113758|gb|ESQ54041.1| hypothetical protein
EUTSA_v10026230mg [Eutrema salsugineum]
Length = 213
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G +NL P +KE+LK + KVVMG+A+RG AG IQ+G+ VSEDGGNK
Sbjct: 17 GPENLTPELKEKLKACVPDSKVVMGRAKRGLYAGRHIQYGNRVSEDGGNK 66
>ref|XP_006284519.1| hypothetical protein CARUB_v10005720mg [Capsella rubella]
gi|565445879|ref|XP_006284520.1| hypothetical protein
CARUB_v10005720mg [Capsella rubella]
gi|482553224|gb|EOA17417.1| hypothetical protein
CARUB_v10005720mg [Capsella rubella]
gi|482553225|gb|EOA17418.1| hypothetical protein
CARUB_v10005720mg [Capsella rubella]
Length = 213
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G +N+ P +KE+LK + KVVMG+A+RG AG IQ+G+ VSEDGGNK
Sbjct: 17 GAENITPELKEKLKACVPDAKVVMGRAKRGLYAGRHIQYGNRVSEDGGNK 66
>gb|EMJ27291.1| hypothetical protein PRUPE_ppa010814mg [Prunus persica]
Length = 235
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/51 (50%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTT--NKVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G++ L P ++E+LKK +K++MG+A+RG AG IQFG+ +SEDGGNK
Sbjct: 36 GDKTLPPRLREELKKQGVPDSKIIMGRAKRGIYAGRHIQFGNQISEDGGNK 86
>ref|XP_002867301.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297313137|gb|EFH43560.1| ribosomal protein
L28 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G +N+ P +KE+LK + KVVMG+A+RG AG IQ+G+ VSEDGGNK
Sbjct: 17 GAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVSEDGGNK 66
>ref|NP_194874.1| ribosomal L28 family protein [Arabidopsis thaliana]
gi|15724234|gb|AAL06510.1|AF412057_1 AT4g31460/F3L17_30
[Arabidopsis thaliana] gi|5262757|emb|CAB45905.1|
putative protein [Arabidopsis thaliana]
gi|7270049|emb|CAB79864.1| putative protein [Arabidopsis
thaliana] gi|21593391|gb|AAM65340.1| unknown
[Arabidopsis thaliana] gi|30102482|gb|AAP21159.1|
At4g31460/F3L17_30 [Arabidopsis thaliana]
gi|332660516|gb|AEE85916.1| ribosomal L28 family protein
[Arabidopsis thaliana]
Length = 212
Score = 55.1 bits (131), Expect = 1e-05
Identities = 28/50 (56%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 307 GEQNLAPGVKEQLKKSTTN-KVVMGQAQRGFLAG*RIQFGSCVSEDGGNK 453
G +N+ P +KE+LK + KVVMG+A+RG AG IQ+G+ VSEDGGNK
Sbjct: 17 GAENITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRVSEDGGNK 66