BLASTX nr result

ID: Rehmannia24_contig00020551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00020551
         (553 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308297.1| hypothetical protein POPTR_0006s15600g [Popu...    52   1e-08
ref|XP_006361825.1| PREDICTED: uncharacterized protein LOC102597...    60   3e-07
ref|XP_004242966.1| PREDICTED: uncharacterized protein LOC101265...    59   8e-07
gb|EOY30485.1| C-terminal, putative [Theobroma cacao]                  56   7e-06

>ref|XP_002308297.1| hypothetical protein POPTR_0006s15600g [Populus trichocarpa]
           gi|222854273|gb|EEE91820.1| hypothetical protein
           POPTR_0006s15600g [Populus trichocarpa]
          Length = 488

 Score = 52.0 bits (123), Expect(2) = 1e-08
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = -2

Query: 441 MECWIPLFVIFLNSPCPES*ASLRLQKSINLSSNTNPFSTISFLSL 304
           ME W+PLF IFLNSP PE+ ASL L++S   SS++ P +T SFLSL
Sbjct: 1   MEAWVPLFNIFLNSPTPETEASLWLEQS--SSSSSVPITTTSFLSL 44



 Score = 33.1 bits (74), Expect(2) = 1e-08
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -1

Query: 286 TTLMDAYSPPPQKKSSPNVNYTFLSVCV**SWPL*FQVQAWMLSFLAYDHKRFCN*EL*K 107
           T+ +   + P    SS N    FL         L F VQ+ +LSFL ++H+RFC  +L K
Sbjct: 39  TSFLSLLAEPIINNSSTNRRVMFLQT-------LPFLVQSRILSFLGFEHQRFCKRDLSK 91


>ref|XP_006361825.1| PREDICTED: uncharacterized protein LOC102597922 [Solanum tuberosum]
          Length = 494

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 32/48 (66%), Positives = 35/48 (72%)
 Frame = -2

Query: 441 MECWIPLFVIFLNSPCPES*ASLRLQKSINLSSNTNPFSTISFLSLHT 298
           MECW+PLF IFLNSPCPE+ ASL LQ+S N    T   ST SFLSL T
Sbjct: 1   MECWVPLFQIFLNSPCPETEASLWLQQSFNQPEAT-AISTTSFLSLLT 47


>ref|XP_004242966.1| PREDICTED: uncharacterized protein LOC101265143 [Solanum
           lycopersicum]
          Length = 493

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = -2

Query: 441 MECWIPLFVIFLNSPCPES*ASLRLQKSINLSSNTNPFSTISFLSL 304
           MECW+PLF IFLNSPCPE+ AS+ LQ+S N    T   ST SFLSL
Sbjct: 1   MECWVPLFQIFLNSPCPETEASMWLQQSFNQHEAT-AISTTSFLSL 45


>gb|EOY30485.1| C-terminal, putative [Theobroma cacao]
          Length = 495

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 31/52 (59%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
 Frame = -2

Query: 441 MECWIPLFVIFLNSPCPES*ASLRLQKSINL----SSNTNPFSTISFLSLHT 298
           ME W+PLF IF+NSP PE+ ASL LQ+S N     SS T P +T SFLSL T
Sbjct: 1   MEPWVPLFDIFMNSPTPETEASLWLQQSFNATTSSSSTTTPITTSSFLSLLT 52


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