BLASTX nr result
ID: Rehmannia24_contig00019987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00019987
(455 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293124.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|EMJ01118.1| hypothetical protein PRUPE_ppa006910mg [Prunus pe... 88 1e-15
ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citr... 86 7e-15
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
emb|CBI19389.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Popu... 80 2e-13
ref|XP_006418648.1| hypothetical protein EUTSA_v10002564mg [Eutr... 80 4e-13
ref|XP_004485985.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,... 80 4e-13
ref|XP_006297781.1| hypothetical protein CARUB_v10013818mg, part... 79 6e-13
ref|XP_003593879.1| Pentatricopeptide repeat-containing protein ... 77 2e-12
ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arab... 77 3e-12
gb|EXB84488.1| hypothetical protein L484_015819 [Morus notabilis] 76 4e-12
ref|NP_189158.3| pentatricopeptide repeat-containing protein [Ar... 76 4e-12
gb|EPS61525.1| hypothetical protein M569_13273, partial [Genlise... 75 7e-12
gb|EOX93806.1| Tetratricopeptide repeat (TPR)-like superfamily p... 75 7e-12
>ref|XP_004293124.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 370
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
+ FDML NS+SPDLLTYKTLLE +CRDG+G +A +LLE FR RD MNE+TY TLLN
Sbjct: 305 DVVFDMLSNSVSPDLLTYKTLLEGLCRDGKGEEAFDLLENFRSRDRAMNERTYKTLLN 362
>gb|EMJ01118.1| hypothetical protein PRUPE_ppa006910mg [Prunus persica]
Length = 390
Score = 88.2 bits (217), Expect = 1e-15
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E DML NSMSPDLLTYKTLLE +CRDG+G++A +LLE FRK DS M EKTY TLLN
Sbjct: 325 EVVLDMLSNSMSPDLLTYKTLLEGLCRDGKGSEAFDLLEDFRKGDSKMGEKTYKTLLN 382
>ref|XP_006484804.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Citrus sinensis]
Length = 388
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
E FDMLGNSM PD+LTYKTLLE +CR+GR ++A +LLE FRKRD M ++ Y TLLNG
Sbjct: 323 EVLFDMLGNSMGPDMLTYKTLLEGLCREGRESEAFDLLEEFRKRDVVMGDRNYKTLLNG 381
>ref|XP_006352669.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Solanum tuberosum]
Length = 379
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E FDML NS+SPD LTYKT++EE+ R+GRG+ A ELLE F+KRDS MNEKTY +LLN
Sbjct: 314 EVVFDMLDNSLSPDQLTYKTVMEELSREGRGDYAFELLEEFKKRDSLMNEKTYKSLLN 371
>ref|XP_006437247.1| hypothetical protein CICLE_v10031787mg [Citrus clementina]
gi|557539443|gb|ESR50487.1| hypothetical protein
CICLE_v10031787mg [Citrus clementina]
Length = 388
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
E FDMLGNSM PD+LTYKTLLE +CR+GR ++A +LLE FRKRD M ++ Y TLLNG
Sbjct: 323 EVLFDMLGNSMGPDMLTYKTLLEGLCREGRESEAFDLLEEFRKRDVVMGDRNYKTLLNG 381
>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
gi|449516331|ref|XP_004165200.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cucumis sativus]
Length = 393
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
E FDML NSM+PDLLTY+TLLE +CR+GR ++A +LL+ RKRD MNEKT+ TLLNG
Sbjct: 328 EICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMNEKTFKTLLNG 386
>ref|XP_004242426.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Solanum lycopersicum]
Length = 403
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/58 (67%), Positives = 48/58 (82%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E FDML NS+SPD LTY+T++EE+ R+GRG+ A ELLE F+KRDS MNEKTY +LLN
Sbjct: 338 EVVFDMLDNSLSPDQLTYRTVMEELSREGRGDYAFELLEEFKKRDSLMNEKTYKSLLN 395
>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
Length = 365
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -3
Query: 444 FDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
FDMLGNSM+PDLLTYKTLLE + R+G+ NDA ELLE RK+D++M EKTY TL+ G
Sbjct: 303 FDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLRKKDAWMGEKTYKTLVKG 358
>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Vitis vinifera]
Length = 393
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = -3
Query: 444 FDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
FDMLGNSM+PDLLTYKTLLE + R+G+ NDA ELLE RK+D++M EKTY TL+ G
Sbjct: 331 FDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLRKKDAWMGEKTYKTLVKG 386
>ref|XP_002301807.2| hypothetical protein POPTR_0002s24950g [Populus trichocarpa]
gi|550345772|gb|EEE81080.2| hypothetical protein
POPTR_0002s24950g [Populus trichocarpa]
Length = 387
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/56 (66%), Positives = 46/56 (82%)
Frame = -3
Query: 444 FDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLNG 277
FDMLG+SMSPDLLTY+T+LE +CR+G + A ELLE +RK+D FM EK Y +LLNG
Sbjct: 325 FDMLGDSMSPDLLTYRTVLEGLCREGMVDKAFELLEEWRKKDGFMGEKNYKSLLNG 380
>ref|XP_006418648.1| hypothetical protein EUTSA_v10002564mg [Eutrema salsugineum]
gi|557096576|gb|ESQ37084.1| hypothetical protein
EUTSA_v10002564mg [Eutrema salsugineum]
Length = 384
Score = 79.7 bits (195), Expect = 4e-13
Identities = 34/58 (58%), Positives = 47/58 (81%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E ++ML NS+SPD+LTY T+L E+CR+GRGN+ALELLE ++KRD M E+ Y TL++
Sbjct: 319 EVVYEMLANSLSPDMLTYNTVLAELCREGRGNEALELLEEWKKRDPVMGERNYRTLMD 376
>ref|XP_004485985.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
mitochondrial-like [Cicer arietinum]
Length = 369
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E FDML NS SPD LTYKT+LE +CR+GR +DA ELL+ +KRD FMNEK Y TL N
Sbjct: 304 EVMFDMLDNSRSPDHLTYKTVLEGLCREGRVDDAFELLDECKKRDGFMNEKMYKTLFN 361
>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 382
Score = 79.7 bits (195), Expect = 4e-13
Identities = 36/58 (62%), Positives = 46/58 (79%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
+ FDML NSMSPD LTY+T+LE +CR+G+ ++A ELLE FRKRD M++KTY LLN
Sbjct: 317 DVVFDMLANSMSPDFLTYRTVLEGLCREGKTDEAFELLEEFRKRDMSMSQKTYKILLN 374
>ref|XP_006297781.1| hypothetical protein CARUB_v10013818mg, partial [Capsella rubella]
gi|482566490|gb|EOA30679.1| hypothetical protein
CARUB_v10013818mg, partial [Capsella rubella]
Length = 414
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E +DML NS+SPD+LTY T+L E+CR GRGN+ALEL+E ++KRD M E+ Y TL++
Sbjct: 349 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGNEALELVEEWKKRDPVMGERNYRTLMD 406
>ref|XP_003593879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482927|gb|AES64130.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 360
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E FDMLGNS SPD LTYKT+LE +C +GR ++A ELL+ F+KRD MNE+ Y TL N
Sbjct: 295 EVMFDMLGNSRSPDCLTYKTVLEGLCHEGRVDEAFELLDEFKKRDVGMNERMYKTLFN 352
>ref|XP_002883590.1| hypothetical protein ARALYDRAFT_899142 [Arabidopsis lyrata subsp.
lyrata] gi|297329430|gb|EFH59849.1| hypothetical protein
ARALYDRAFT_899142 [Arabidopsis lyrata subsp. lyrata]
Length = 379
Score = 76.6 bits (187), Expect = 3e-12
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E +DML NS+SPD+LTY T+L E+CR GRG +ALEL+E ++KRD M E+ Y TL++
Sbjct: 314 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGGEALELVEEWKKRDPVMGERNYRTLMD 371
>gb|EXB84488.1| hypothetical protein L484_015819 [Morus notabilis]
Length = 395
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E DML MSPDLLTYKTLLE +CRDG+G++AL LLE FR RD M KTY LLN
Sbjct: 327 EVLRDMLDCKMSPDLLTYKTLLEGLCRDGKGDEALRLLEEFRGRDGLMGGKTYRILLN 384
>ref|NP_189158.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273968|sp|Q9LSF5.1|PP254_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g25210, mitochondrial; Flags: Precursor
gi|9294178|dbj|BAB02080.1| unnamed protein product
[Arabidopsis thaliana] gi|332643472|gb|AEE76993.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 379
Score = 76.3 bits (186), Expect = 4e-12
Identities = 32/58 (55%), Positives = 46/58 (79%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
E +DML NS+SPD+LTY T+L E+CR GRG++ALE++E ++KRD M E+ Y TL++
Sbjct: 314 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
>gb|EPS61525.1| hypothetical protein M569_13273, partial [Genlisea aurea]
Length = 369
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/54 (66%), Positives = 42/54 (77%)
Frame = -3
Query: 453 ETAFDMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYN 292
E A DM+ N+M+PDLLTY+TLLEEMCR GR A E+LE FRK D FM E+TYN
Sbjct: 316 EVADDMVENAMAPDLLTYETLLEEMCRHGREEAAFEVLERFRKMDRFMTERTYN 369
>gb|EOX93806.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 382
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/54 (64%), Positives = 42/54 (77%)
Frame = -3
Query: 441 DMLGNSMSPDLLTYKTLLEEMCRDGRGNDALELLEGFRKRDSFMNEKTYNTLLN 280
DML NSM+PDLLTYKT+LEE CR GR +DA ELLE ++KRD M +K Y L+N
Sbjct: 323 DMLANSMAPDLLTYKTVLEEFCRRGRSHDAFELLEDWKKRDLSMGQKNYRILVN 376