BLASTX nr result

ID: Rehmannia24_contig00019923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00019923
         (320 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS63045.1| hypothetical protein M569_11742, partial [Genlise...    65   1e-08
ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257...    61   2e-07
ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II tra...    59   7e-07
ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II tra...    59   7e-07
ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II tra...    59   7e-07

>gb|EPS63045.1| hypothetical protein M569_11742, partial [Genlisea aurea]
          Length = 216

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 31/53 (58%), Positives = 35/53 (66%)
 Frame = +3

Query: 162 MDNNNWRAAXXXXXXXXXXXXXETVAAAGMEGGDWRTQLQPDSRQRIVNKIME 320
           MD N WRAA             E++A   +EGGDWRTQLQPDSRQRIVNKI+E
Sbjct: 1   MDGNAWRAAQAQVQIPGQVIGTESLAMPNIEGGDWRTQLQPDSRQRIVNKILE 53


>ref|XP_004236821.1| PREDICTED: uncharacterized protein LOC101257852 [Solanum
           lycopersicum]
          Length = 1342

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 32/53 (60%), Positives = 32/53 (60%)
 Frame = +3

Query: 162 MDNNNWRAAXXXXXXXXXXXXXETVAAAGMEGGDWRTQLQPDSRQRIVNKIME 320
           MD NNWRAA                AA  ME GDWRTQL PDSRQRIVNKIME
Sbjct: 1   MDGNNWRAAQAQAPGGGEGGG---AAAGAMESGDWRTQLMPDSRQRIVNKIME 50


>ref|XP_006359328.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X3 [Solanum tuberosum]
          Length = 1349

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/53 (58%), Positives = 32/53 (60%)
 Frame = +3

Query: 162 MDNNNWRAAXXXXXXXXXXXXXETVAAAGMEGGDWRTQLQPDSRQRIVNKIME 320
           MD NNWRAA                AA  M+ GDWRTQL PDSRQRIVNKIME
Sbjct: 1   MDGNNWRAAQAQGGGEGGG-----AAAGAMDSGDWRTQLLPDSRQRIVNKIME 48


>ref|XP_006359327.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X2 [Solanum tuberosum]
          Length = 1352

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/53 (58%), Positives = 32/53 (60%)
 Frame = +3

Query: 162 MDNNNWRAAXXXXXXXXXXXXXETVAAAGMEGGDWRTQLQPDSRQRIVNKIME 320
           MD NNWRAA                AA  M+ GDWRTQL PDSRQRIVNKIME
Sbjct: 1   MDGNNWRAAQAQGGGEGGG-----AAAGAMDSGDWRTQLLPDSRQRIVNKIME 48


>ref|XP_006359326.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like isoform X1 [Solanum tuberosum]
          Length = 1355

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/53 (58%), Positives = 32/53 (60%)
 Frame = +3

Query: 162 MDNNNWRAAXXXXXXXXXXXXXETVAAAGMEGGDWRTQLQPDSRQRIVNKIME 320
           MD NNWRAA                AA  M+ GDWRTQL PDSRQRIVNKIME
Sbjct: 1   MDGNNWRAAQAQGGGEGGG-----AAAGAMDSGDWRTQLLPDSRQRIVNKIME 48


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