BLASTX nr result

ID: Rehmannia24_contig00019875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00019875
         (496 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum] gi...    98   1e-18
ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257...    84   3e-14
gb|EOY27767.1| Starch synthase 4 isoform 2 [Theobroma cacao]           74   3e-11
gb|EOY27766.1| Starch synthase 4 isoform 1 [Theobroma cacao] gi|...    74   3e-11
gb|EXB45761.1| Glycogen synthase [Morus notabilis]                     57   2e-06
ref|XP_006414132.1| hypothetical protein EUTSA_v10024297mg [Eutr...    56   4e-06

>ref|NP_001234617.1| starch synthase IV [Solanum lycopersicum]
           gi|247643234|gb|ACT09058.1| starch synthase IV precursor
           [Solanum lycopersicum]
          Length = 1001

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = -1

Query: 421 MEATPSTCFLGRGLVGGGLKCSHVIVRLYPLPSQRLRPASCRMRQR-NFSVQNKRQQAKK 245
           ME   S CF  +   GG      V VR YPLPSQRL PAS +MRQR NFS+QNK++Q K 
Sbjct: 1   MEMKISNCFPTQKWCGGASLSRQVNVRFYPLPSQRLPPASGKMRQRRNFSLQNKKKQTKT 60

Query: 244 INLERPTNTNSQQNGDSDSDPSNLSKDSIIDSNQEMASNERVPIILEGGYSKEKGYNDSS 65
           IN+ERP + + Q + D DSD   +SK S+ +SNQE+   E V    E   S E  Y+   
Sbjct: 61  INIERPPDVDLQLSDDIDSDTEKMSKQSLSNSNQEVPIEENVDTSTETKSSDESTYSSVD 120

Query: 64  PQNE 53
              E
Sbjct: 121 SNEE 124


>ref|XP_002274716.1| PREDICTED: uncharacterized protein LOC100257130 [Vitis vinifera]
           gi|297740652|emb|CBI30834.3| unnamed protein product
           [Vitis vinifera]
          Length = 1011

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
 Frame = -1

Query: 421 MEATPSTCFLGRGLVGGGLKCSHVIVRLYPLPSQRLRPASCRMRQRNFSVQNKRQQAKKI 242
           M A  STCFL  G   G L C     R +  PS RL PASC+MR RNFS Q+KRQQ KK+
Sbjct: 1   MAAKLSTCFLSHGW--GSLDCKRSNGR-FLAPSHRLLPASCKMRHRNFSSQHKRQQTKKV 57

Query: 241 NLE-RPTNTNSQQNGDSDSDPSNLSKDSIIDSNQ 143
           + + RPTN++ Q NGD D++P N   D +   NQ
Sbjct: 58  SPDRRPTNSHFQSNGDEDTEPENALADGVSSLNQ 91


>gb|EOY27767.1| Starch synthase 4 isoform 2 [Theobroma cacao]
          Length = 1017

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
 Frame = -1

Query: 421 MEATPSTCFLGRGLVGGGLKCS----------HVIVRLYPLPSQRLRPASCRMRQRNFSV 272
           M A  STCF   G +      +          HV +RL  +PS+RL PASC+MRQ+NFS 
Sbjct: 1   MSAKLSTCFFNHGFISLNYNNNSKKNVISYKKHVNLRLLFVPSRRLLPASCKMRQKNFSS 60

Query: 271 QNKRQQAKKINLER-PTNTNSQQNGDSDSDPSNLSKDSI 158
           QNKR Q KK+  E+ PT+   Q N D +S+P N   +S+
Sbjct: 61  QNKRPQGKKLPSEQIPTSAKLQPNSDEESEPENSVPNSV 99


>gb|EOY27766.1| Starch synthase 4 isoform 1 [Theobroma cacao]
           gi|508780512|gb|EOY27768.1| Starch synthase 4 isoform 1
           [Theobroma cacao] gi|508780513|gb|EOY27769.1| Starch
           synthase 4 isoform 1 [Theobroma cacao]
          Length = 1056

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
 Frame = -1

Query: 421 MEATPSTCFLGRGLVGGGLKCS----------HVIVRLYPLPSQRLRPASCRMRQRNFSV 272
           M A  STCF   G +      +          HV +RL  +PS+RL PASC+MRQ+NFS 
Sbjct: 1   MSAKLSTCFFNHGFISLNYNNNSKKNVISYKKHVNLRLLFVPSRRLLPASCKMRQKNFSS 60

Query: 271 QNKRQQAKKINLER-PTNTNSQQNGDSDSDPSNLSKDSI 158
           QNKR Q KK+  E+ PT+   Q N D +S+P N   +S+
Sbjct: 61  QNKRPQGKKLPSEQIPTSAKLQPNSDEESEPENSVPNSV 99


>gb|EXB45761.1| Glycogen synthase [Morus notabilis]
          Length = 1003

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = -1

Query: 406 STCFLGRGLVGGGLKCSHVIVRLYPLPSQ-RLRPASCRMRQRNFSVQNKRQQAKKINLER 230
           ST F+ +G+   GL C+       P PS  RL  ASC+MRQRN S  NKRQQ KK   E 
Sbjct: 6   STWFVSQGV--SGLSCNRSSNGNLPFPSSHRLFTASCKMRQRNLSSPNKRQQLKKAAQEP 63

Query: 229 PTNTNSQQNGDSDSDPSNLSKDSIIDSNQEMASNERVP 116
            TN + + + +  S PS+     I+  NQE  SN  VP
Sbjct: 64  LTNGSFEPDSEIPSTPSS----PIL--NQESMSNNDVP 95


>ref|XP_006414132.1| hypothetical protein EUTSA_v10024297mg [Eutrema salsugineum]
           gi|557115302|gb|ESQ55585.1| hypothetical protein
           EUTSA_v10024297mg [Eutrema salsugineum]
          Length = 1039

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
 Frame = -1

Query: 406 STCFLGRGLVGGGLKCSHVIVR-LYPLPSQRLRPASCRMRQRNFSVQNKRQQAKKINLE- 233
           S+ FL  GL G   +  H   R  + +PS+RL PASC++RQ+     NKRQ+ KK + + 
Sbjct: 6   SSYFLTHGLAGISCEREHGSSRRFFCVPSRRLLPASCKIRQQRGFDSNKRQEIKKGSPKP 65

Query: 232 -RPTNTNSQQNGDSDSDPSNLSKDSI 158
             P N++ Q N D +S+P N S +S+
Sbjct: 66  ILPINSSLQSNNDEESEPENGSAESV 91


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