BLASTX nr result
ID: Rehmannia24_contig00019836
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00019836
(417 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS59882.1| chromatin remodeling complex subunit, partial [Ge... 92 5e-17
gb|EXB60115.1| SWI/SNF complex subunit SWI3C [Morus notabilis] 88 1e-15
gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao] 86 5e-15
ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citr... 85 9e-15
ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citr... 85 9e-15
ref|XP_002306648.1| SWIRM domain-containing family protein [Popu... 85 1e-14
ref|XP_002520335.1| DNA binding protein, putative [Ricinus commu... 84 1e-14
ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 84 3e-14
gb|EMJ28642.1| hypothetical protein PRUPE_ppa001566mg [Prunus pe... 83 4e-14
ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF comp... 82 7e-14
ref|XP_004142633.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 82 1e-13
ref|XP_006365536.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 81 2e-13
ref|XP_004242041.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 80 4e-13
ref|XP_006386367.1| hypothetical protein POPTR_0002s08110g [Popu... 79 6e-13
ref|XP_003527944.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 78 1e-12
ref|XP_006578964.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 78 1e-12
ref|XP_004502500.1| PREDICTED: SWI/SNF complex subunit SWI3C-lik... 77 2e-12
ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thal... 77 2e-12
ref|XP_003630455.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 77 2e-12
ref|XP_003602057.1| SWI/SNF complex subunit SMARCC2 [Medicago tr... 77 2e-12
>gb|EPS59882.1| chromatin remodeling complex subunit, partial [Genlisea aurea]
Length = 629
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/74 (62%), Positives = 53/74 (71%)
Frame = -3
Query: 229 KLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARNGESGGQGQVGVARLENISYGQ 50
++V GG+RICEFP+A+KR V RPHS V IV+AER G G GQ G LENISYGQ
Sbjct: 1 EMVAGGVRICEFPVAVKREVIRPHSSVFRIVEAERVVNYGSCRGTGQGGATALENISYGQ 60
Query: 49 LQALSAVPRDSPAL 8
LQA S VP DSP+L
Sbjct: 61 LQAHSTVPADSPSL 74
>gb|EXB60115.1| SWI/SNF complex subunit SWI3C [Morus notabilis]
Length = 803
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/78 (56%), Positives = 56/78 (71%)
Frame = -3
Query: 241 KESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARNGESGGQGQVGVARLENI 62
+E+E L DGG+R C+FP ++ V+ PH +L IV ERA ++GES QGQ LEN+
Sbjct: 76 QEAEVLSDGGVRYCDFPPVVRHAVNWPHPSLLAIVALERANQSGESKAQGQGSPVFLENV 135
Query: 61 SYGQLQALSAVPRDSPAL 8
SYGQLQ+LSAVP DSPAL
Sbjct: 136 SYGQLQSLSAVPADSPAL 153
>gb|EOY16366.1| SWITCH/sucrose nonfermenting 3C [Theobroma cacao]
Length = 779
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/93 (51%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Frame = -3
Query: 292 DDPHNNSGYRAN------QMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDA 131
D+ NSG A ++ ESE L DGG+RI EFP +KR V+RPH V+ IV A
Sbjct: 49 DNHRENSGDDAGGAVTDPSLAGPSESEVLADGGVRISEFPAVVKRTVNRPHGSVMAIVAA 108
Query: 130 ERAARNGESGGQGQVGVARLENISYGQLQALSA 32
ERA G+S G QV +A LEN+SYGQLQA+SA
Sbjct: 109 ERAGLVGDSKGHQQVALAVLENVSYGQLQAVSA 141
>ref|XP_006434250.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
gi|557536372|gb|ESR47490.1| hypothetical protein
CICLE_v10000405mg [Citrus clementina]
Length = 731
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = -3
Query: 238 ESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARNGESGGQGQVGVARLENIS 59
E+E L+DGG RICEFP A++RVV+RPH V+ IV E A G++ G+ LENIS
Sbjct: 76 ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDASGRS--SAVALENIS 133
Query: 58 YGQLQALSAVPRDSPAL 8
YGQLQALSAVP DS L
Sbjct: 134 YGQLQALSAVPADSAVL 150
>ref|XP_006434249.1| hypothetical protein CICLE_v10000405mg [Citrus clementina]
gi|557536371|gb|ESR47489.1| hypothetical protein
CICLE_v10000405mg [Citrus clementina]
Length = 576
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = -3
Query: 238 ESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARNGESGGQGQVGVARLENIS 59
E+E L+DGG RICEFP A++RVV+RPH V+ IV E A G++ G+ LENIS
Sbjct: 76 ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDASGRS--SAVALENIS 133
Query: 58 YGQLQALSAVPRDSPAL 8
YGQLQALSAVP DS L
Sbjct: 134 YGQLQALSAVPADSAVL 150
>ref|XP_002306648.1| SWIRM domain-containing family protein [Populus trichocarpa]
gi|222856097|gb|EEE93644.1| SWIRM domain-containing
family protein [Populus trichocarpa]
Length = 796
Score = 84.7 bits (208), Expect = 1e-14
Identities = 46/94 (48%), Positives = 62/94 (65%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
E DDP+ N + +E+E L+DGG+R+C+FP + V+RPH+ V+ IV AERA
Sbjct: 62 EDSDDPNPNQ-QPSGPDPNPQETEVLIDGGVRLCDFPPVTRLAVNRPHASVMAIVAAERA 120
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRD 20
GES +GQ+ V LEN+SYGQLQA+SAV D
Sbjct: 121 CLAGESSNRGQL-VVSLENVSYGQLQAVSAVIAD 153
>ref|XP_002520335.1| DNA binding protein, putative [Ricinus communis]
gi|223540554|gb|EEF42121.1| DNA binding protein,
putative [Ricinus communis]
Length = 771
Score = 84.3 bits (207), Expect = 1e-14
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = -3
Query: 295 DDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAAR 116
D +P+ N N + E+E ++DGG+RIC+FP K +V+RPH+ V IV ERA
Sbjct: 65 DPNPNPNPNSNHNPTQPDHETEVVIDGGVRICDFPCVTKLLVNRPHASVSAIVALERANS 124
Query: 115 NGE-SGGQGQVGVARLENISYGQLQALSAVPRDS 17
GE S +GQV V LEN+SYGQLQA+SAVP ++
Sbjct: 125 GGESSSSKGQV-VPHLENMSYGQLQAVSAVPPEA 157
>ref|XP_006472818.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Citrus sinensis]
Length = 773
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/77 (57%), Positives = 54/77 (70%)
Frame = -3
Query: 238 ESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARNGESGGQGQVGVARLENIS 59
E+E L+DGG RICEFP A++RVV+RPH V+ IV E A G++ G+ LENIS
Sbjct: 76 ETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDASGRS--SAVALENIS 133
Query: 58 YGQLQALSAVPRDSPAL 8
+GQLQALS VP DS AL
Sbjct: 134 FGQLQALSVVPADSAAL 150
>gb|EMJ28642.1| hypothetical protein PRUPE_ppa001566mg [Prunus persica]
Length = 801
Score = 82.8 bits (203), Expect = 4e-14
Identities = 49/98 (50%), Positives = 60/98 (61%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
+ +DPH+N A E+E L DGG+R +FP + R V+RPHS VL IV ERA
Sbjct: 53 DVSEDPHHNPQSGAAPDPGPHETEVL-DGGVRQSDFPPVVLRTVNRPHSSVLAIVALERA 111
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPAL 8
+G +G LEN+SYGQLQALSAVP DSPAL
Sbjct: 112 NHSG-GDAKGPTSPIVLENVSYGQLQALSAVPADSPAL 148
>ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C-like
[Cucumis sativus]
Length = 779
Score = 82.0 bits (201), Expect = 7e-14
Identities = 48/97 (49%), Positives = 57/97 (58%)
Frame = -3
Query: 295 DDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAAR 116
DD G S +E E L D R+ EFP +KR V+RPHS VL +V ER +
Sbjct: 50 DDSEDPQIGLHPTPNSTVQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAMERTNQ 109
Query: 115 NGESGGQGQVGVARLENISYGQLQALSAVPRDSPALL 5
GES G + LEN+SYGQLQALSA+P DSPALL
Sbjct: 110 YGESKGVPGNSLI-LENVSYGQLQALSAMPADSPALL 145
>ref|XP_004142633.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Cucumis sativus]
Length = 815
Score = 81.6 bits (200), Expect = 1e-13
Identities = 48/97 (49%), Positives = 57/97 (58%)
Frame = -3
Query: 295 DDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAAR 116
DD G S +E E L D R+ EFP +KR V+RPHS VL +V ER +
Sbjct: 64 DDSEDPQIGLHPTPNSTIQEPELLSDDKFRVSEFPQVVKRAVTRPHSSVLAVVAMERTNQ 123
Query: 115 NGESGGQGQVGVARLENISYGQLQALSAVPRDSPALL 5
GES G + LEN+SYGQLQALSA+P DSPALL
Sbjct: 124 YGESKGVPGNSLI-LENVSYGQLQALSAMPADSPALL 159
>ref|XP_006365536.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Solanum tuberosum]
Length = 790
Score = 80.9 bits (198), Expect = 2e-13
Identities = 48/96 (50%), Positives = 59/96 (61%)
Frame = -3
Query: 292 DDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERAARN 113
+D H N N + R E + + RI EFP+ ++R V+RPHS VL IV E+A +
Sbjct: 49 EDDHQNPN---NSVDRSYSVELVSESRDRISEFPLVVRRAVTRPHSSVLNIVATEKAGLS 105
Query: 112 GESGGQGQVGVARLENISYGQLQALSAVPRDSPALL 5
GES G V LENISYGQLQALSAVP DS +LL
Sbjct: 106 GESRQNGLV----LENISYGQLQALSAVPADSHSLL 137
>ref|XP_004242041.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Solanum
lycopersicum]
Length = 791
Score = 79.7 bits (195), Expect = 4e-13
Identities = 50/97 (51%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = -3
Query: 292 DDPHNNSGYRANQMSREKESEKLVDGGL-RICEFPIAIKRVVSRPHSLVLGIVDAERAAR 116
+D H N N + R S +LV RI EFP+ ++R V+RPHS VL IV E+A
Sbjct: 49 EDEHQNPN---NSVDRSYSSVELVSESRDRISEFPLVVRRAVTRPHSSVLNIVATEKAGL 105
Query: 115 NGESGGQGQVGVARLENISYGQLQALSAVPRDSPALL 5
+GES G V LENISYGQLQALSAVP DS +LL
Sbjct: 106 SGESRQNGLV----LENISYGQLQALSAVPVDSHSLL 138
>ref|XP_006386367.1| hypothetical protein POPTR_0002s08110g [Populus trichocarpa]
gi|550344532|gb|ERP64164.1| hypothetical protein
POPTR_0002s08110g [Populus trichocarpa]
Length = 796
Score = 79.0 bits (193), Expect = 6e-13
Identities = 46/104 (44%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
Frame = -3
Query: 292 DDPHNNSGYRANQMS------------REKESEKLVDGGLRICEFPIAIKRVVSRPHSLV 149
DD +NN YR + +E+E L DGG+RIC+FP + V+RPH+ V
Sbjct: 52 DDHNNNIVYREDSEDPNPHQQPNGPDPNPQETEVLTDGGVRICDFPPVTRLAVNRPHASV 111
Query: 148 LGIVDAERAARNGESGGQGQVGVARLENISYGQLQALSAVPRDS 17
+ IV AER GES +GQ+ LEN+SYGQLQA+SAV +S
Sbjct: 112 MAIVAAERFNLAGESSNRGQL-TLNLENVSYGQLQAVSAVTAES 154
>ref|XP_003527944.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Glycine max]
Length = 785
Score = 78.2 bits (191), Expect = 1e-12
Identities = 43/98 (43%), Positives = 59/98 (60%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
E D D + + + E+E L D G++I +FP IKR V+RPHS V IV ERA
Sbjct: 48 ERDYDSEDQTHHNHPNSQPHVEAEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERA 107
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPAL 8
+G++ Q + LEN+S+GQLQALS+VP D+ AL
Sbjct: 108 LESGDNKAQSALDAPILENVSHGQLQALSSVPSDNFAL 145
>ref|XP_006578964.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Glycine max]
Length = 785
Score = 77.8 bits (190), Expect = 1e-12
Identities = 44/100 (44%), Positives = 58/100 (58%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
E D D + + + E+E L D G++I +FP IKR V+RPHS V IV ERA
Sbjct: 47 ERDYDSEDQTHHNHPNSQPHVETEVLSDHGVQISQFPAVIKRSVNRPHSSVTAIVALERA 106
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPALLG 2
+GE+ + LEN+S+GQLQALS+VP DS A G
Sbjct: 107 LESGENKAPSALAAPVLENVSHGQLQALSSVPSDSFAFDG 146
>ref|XP_004502500.1| PREDICTED: SWI/SNF complex subunit SWI3C-like [Cicer arietinum]
Length = 781
Score = 77.4 bits (189), Expect = 2e-12
Identities = 48/98 (48%), Positives = 61/98 (62%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
+++D H NS ++E E L D G++I +FP+ IKR V+RPHS V IV ERA
Sbjct: 50 DSEDQNHPNS-------QPQQEIEVLSDHGVQISQFPMVIKRAVNRPHSSVTAIVALERA 102
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPAL 8
G+S GQ Q LEN+S+GQLQALS VP DS AL
Sbjct: 103 MELGDSKGQLQ-SPPFLENVSHGQLQALSFVPSDSLAL 139
>ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thaliana]
gi|75315301|sp|Q9XI07.1|SWI3C_ARATH RecName:
Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C;
AltName: Full=Transcription regulatory protein SWI3C
gi|5263321|gb|AAD41423.1|AC007727_12 Contains similarity
to gb|AF033823 moira protein from Drosophila
melanogaster and contains a PF|00249 Myb-like
DNA-binding domain. EST gb|Z25609 comes from this gene
[Arabidopsis thaliana] gi|20259454|gb|AAM13847.1|
putative transcriptional regulatory protein [Arabidopsis
thaliana] gi|21436147|gb|AAM51320.1| putative
transcriptional regulatory protein [Arabidopsis
thaliana] gi|332192023|gb|AEE30144.1| SWI/SNF complex
subunit SWI3C [Arabidopsis thaliana]
Length = 807
Score = 77.4 bits (189), Expect = 2e-12
Identities = 46/110 (41%), Positives = 61/110 (55%), Gaps = 15/110 (13%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKE---------------SEKLVDGGLRICEFPIAIKRVVS 167
E D++ +NN+ + + E E + D G RI +FP +KRVV
Sbjct: 34 EEDEENNNNNNEEMDDVENADELQQNGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVI 93
Query: 166 RPHSLVLGIVDAERAARNGESGGQGQVGVARLENISYGQLQALSAVPRDS 17
RPH+ V+ +V AERA GE+ GQG + LENIS+GQLQALS VP DS
Sbjct: 94 RPHASVMAVVAAERAGLIGETRGQG--SLPALENISFGQLQALSTVPADS 141
>ref|XP_003630455.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355524477|gb|AET04931.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 884
Score = 77.4 bits (189), Expect = 2e-12
Identities = 48/98 (48%), Positives = 60/98 (61%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
++DD H NS ++E E L D ++I +FP+ IKR V+RPHS V IV ERA
Sbjct: 51 DSDDQHHPNS-------QPQQEIEVLSDHAVQISQFPMVIKRAVNRPHSSVTAIVALERA 103
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPAL 8
G+S Q Q LEN+S+GQLQALSAVP DS AL
Sbjct: 104 MELGDSKAQLQ-NTPFLENVSHGQLQALSAVPSDSLAL 140
>ref|XP_003602057.1| SWI/SNF complex subunit SMARCC2 [Medicago truncatula]
gi|355491105|gb|AES72308.1| SWI/SNF complex subunit
SMARCC2 [Medicago truncatula]
Length = 874
Score = 77.4 bits (189), Expect = 2e-12
Identities = 48/98 (48%), Positives = 60/98 (61%)
Frame = -3
Query: 301 ETDDDPHNNSGYRANQMSREKESEKLVDGGLRICEFPIAIKRVVSRPHSLVLGIVDAERA 122
++DD H NS ++E E L D ++I +FP+ IKR V+RPHS V IV ERA
Sbjct: 51 DSDDQHHPNS-------QPQQEIEVLSDHAVQISQFPMVIKRAVNRPHSSVTAIVALERA 103
Query: 121 ARNGESGGQGQVGVARLENISYGQLQALSAVPRDSPAL 8
G+S Q Q LEN+S+GQLQALSAVP DS AL
Sbjct: 104 MELGDSKAQLQ-NTPFLENVSHGQLQALSAVPSDSLAL 140