BLASTX nr result

ID: Rehmannia24_contig00019606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00019606
         (869 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004307480.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo...    74   7e-11
ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vin...    74   7e-11

>ref|XP_004307480.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Fragaria
           vesca subsp. vesca]
          Length = 982

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 59/234 (25%)
 Frame = -1

Query: 527 VISDRYSEMISELGVRSVLGRGSSNDYNEEMGRMVRERASEKEASDREREL--------- 375
           +++D YS+M+SE+ +RS+L + +  DY+E++  ++R++   +E SDRE+EL         
Sbjct: 1   MVTDTYSKMMSEMSMRSML-KNNGGDYSEDLSLLIRQQ--RQEVSDREKELNPYRSGSAP 57

Query: 374 -----------------------RSDPAYSCYYYQNVNL------------------QXX 318
                                  RSDPAY  +YY NVNL                  +  
Sbjct: 58  PTVEGSLNAVGGLVDDVNTEEELRSDPAYHKFYYANVNLNPRLPPPMRSKEEWRFAQRGG 117

Query: 317 XXXXXXXSAIGDRRKMSR-----TDFCGPKEEHIMQAK--EWSXXXXXXXXXXXXGSQHN 159
                    IGDRRK  R     + F   + E+   A+  EW             GS+  
Sbjct: 118 GGGGSGVGGIGDRRKGGRGGGEGSXFFSVQPENGAAARNGEWGGDGLIGLPGLGLGSRQK 177

Query: 158 NIADMVQDDISNATXXXXXXXXXXXRAFQD-TESSESHMA-LHHELASLGALHS 3
           +IA+++QDDI N +            AF D  E+S++  A +H +LA+L AL S
Sbjct: 178 SIAEILQDDIQNTSGSRHPSRPASRNAFDDGVETSDTQYAQMHRDLAALDALRS 231


>ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1015

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 74/263 (28%), Positives = 106/263 (40%), Gaps = 88/263 (33%)
 Frame = -1

Query: 527 VISDRYSEMISELGVRSVLGRGSSNDYNEEMGRMVRE-RASEKEASDRER---------- 381
           +I+D YS+M+S++G+RS+ G     +Y E++G ++RE R  E  ASDRE+          
Sbjct: 1   MITDTYSKMMSDIGMRSMPGNA---EYREDLGLLIREQRRQEVAASDREKELSIYRSGSA 57

Query: 380 ------------------------------ELRSDPAYSCYYYQNVNLQ----------- 324
                                         ELR+DPAY  YYY NVNL            
Sbjct: 58  PPTVEGSLSAVGGLFGGGGDGSDTGFASEEELRADPAYVNYYYSNVNLNPRLPPPRLSKE 117

Query: 323 ---------------XXXXXXXXXSAIGDRRKMSR-------------TDFCGPKEEHIM 228
                                     IGDRRK+ R               F G K+E+  
Sbjct: 118 DWRFAQRLHGGGAGGGGSGSSSSVGGIGDRRKVGRGGDGNGSSLFLMQPGFNGQKDENGA 177

Query: 227 QAK-----EWSXXXXXXXXXXXXGSQHNNIADMVQDDISNAT-XXXXXXXXXXXRAFQD- 69
           +++     EW             GS+  ++A+++QDDI +AT             AF D 
Sbjct: 178 ESRKAQGVEWGGDGLIGLPGLGLGSRQKSLAEIIQDDIGHATSVSRHPSRPASRNAFDDN 237

Query: 68  TESSESHMA-LHHELASLGALHS 3
            E+SE+  + LHHELAS+ AL S
Sbjct: 238 VETSEAQFSHLHHELASMDALRS 260


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