BLASTX nr result
ID: Rehmannia24_contig00018937
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018937
(610 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleop... 84 4e-14
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop... 82 1e-13
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr... 82 1e-13
ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleop... 82 1e-13
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207... 81 3e-13
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 78 2e-12
gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus pe... 77 4e-12
gb|EOY13201.1| RNA-binding family protein [Theobroma cacao] 74 2e-11
gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea] 73 7e-11
ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleop... 70 3e-10
gb|ACN41154.1| unknown [Picea sitchensis] 68 2e-09
gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus... 68 2e-09
gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nu... 68 2e-09
gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris] 68 2e-09
ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-l... 67 5e-09
ref|XP_004510069.1| PREDICTED: heterogeneous nuclear ribonucleop... 66 8e-09
gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus pe... 65 1e-08
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ... 64 3e-08
ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [A... 61 2e-07
ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleop... 61 3e-07
>ref|XP_004251889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Solanum
lycopersicum]
Length = 440
Score = 83.6 bits (205), Expect = 4e-14
Identities = 42/67 (62%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGMGSGDYP--GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAY 354
+G AGRG S+YGLPPSSAGM SGDYP G+HY G NQ GA +APRV PGG Y
Sbjct: 374 LGGAGRGSSMYGLPPSSAGMPSGDYPPQGSHYGPLHQPHGLQNQGPGASAAPRVAPGGMY 433
Query: 353 QGMPPYY 333
QGM YY
Sbjct: 434 QGMHSYY 440
>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X1 [Citrus sinensis]
gi|568864564|ref|XP_006485664.1| PREDICTED:
heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X2 [Citrus sinensis]
Length = 425
Score = 82.0 bits (201), Expect = 1e-13
Identities = 42/68 (61%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGDYPGA-HYSLSG---GYQGQHNQPAGAFSAPRVPPGGA 357
G G G SLY LPPSSAGM SG YP A HY LS GY QH+Q AG PRVPPGG
Sbjct: 358 GGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGM 417
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 418 YPNVPPYY 425
>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
gi|567919444|ref|XP_006451728.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554953|gb|ESR64967.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554954|gb|ESR64968.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
Length = 425
Score = 82.0 bits (201), Expect = 1e-13
Identities = 42/68 (61%), Positives = 44/68 (64%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGDYPGA-HYSLSG---GYQGQHNQPAGAFSAPRVPPGGA 357
G G G SLY LPPSSAGM SG YP A HY LS GY QH+Q AG PRVPPGG
Sbjct: 358 GGLGGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGM 417
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 418 YPNVPPYY 425
>ref|XP_006358946.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Solanum tuberosum]
Length = 446
Score = 81.6 bits (200), Expect = 1e-13
Identities = 41/67 (61%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGMGSGDYP--GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAY 354
+G AGRG S+YG PPSSAGM SGDYP G+HY G NQ GA +APRV PGG Y
Sbjct: 380 LGGAGRGSSMYGQPPSSAGMPSGDYPPQGSHYGSLHQPHGLQNQGPGASAAPRVAPGGMY 439
Query: 353 QGMPPYY 333
QGM YY
Sbjct: 440 QGMHSYY 446
>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED:
uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 80.9 bits (198), Expect = 3e-13
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGMGSGDYPGA-HYSLSG--GYQGQHNQPAGAFSAPRVPPGGA 357
+G AG SLY LP SS GM SG YP + HYS+S G+ QH+QPAG APRVPPGG
Sbjct: 367 LGGAGGASSLYRLPQSSVGMPSGGYPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGM 426
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 427 YPNVPPYY 434
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 78.2 bits (191), Expect = 2e-12
Identities = 40/68 (58%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGMGSGDYPGA-HYSLSGG--YQGQHNQPAGAFSAPRVPPGGA 357
+G AG G SLY LPPS+ GM SG YP + HYSLS Y Q +QPAG PRVPPGG
Sbjct: 382 LGVAGGGSSLYRLPPSTVGMPSGGYPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGM 441
Query: 356 YQGMPPYY 333
Y PPYY
Sbjct: 442 YPSGPPYY 449
>gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus persica]
Length = 440
Score = 77.0 bits (188), Expect = 4e-12
Identities = 38/65 (58%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGDYP-GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAYQG 348
G G G SLYGL PSSAG+ S +P HY LS YQ QH+Q AG PRVPPGG Y
Sbjct: 377 GGVGTGSSLYGLAPSSAGLPSSRFPESGHYGLS-SYQNQHHQQAGTSPMPRVPPGGMYPN 435
Query: 347 MPPYY 333
+PPYY
Sbjct: 436 VPPYY 440
>gb|EOY13201.1| RNA-binding family protein [Theobroma cacao]
Length = 429
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/65 (58%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 518 AGRGPSLYGLPPSSAGMGSGDYP-GAHYSLSGG--YQGQHNQPAGAFSAPRVPPGGAYQG 348
AG G SLY LPPSS GM +G YP AHYSLS + QH+Q AG PRVPPGG Y
Sbjct: 365 AGGGSSLYRLPPSSVGMPTGGYPESAHYSLSSSSAFPSQHHQGAGTSPVPRVPPGGMYPN 424
Query: 347 MPPYY 333
PP+Y
Sbjct: 425 GPPFY 429
>gb|EPS74427.1| hypothetical protein M569_00327 [Genlisea aurea]
Length = 414
Score = 72.8 bits (177), Expect = 7e-11
Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGMGSGDYPGAHYSL-SGGYQGQHNQPAGAFSAPRVPPGGAYQ 351
+G AGRG SLYG P+S M SG+ G HY L SGGY G NQP+G A +V PGG YQ
Sbjct: 353 VGGAGRGSSLYGFAPTSGPMASGEKLG-HYGLSSGGYHGPPNQPSG---ASKVRPGGGYQ 408
Query: 350 GMPPYY 333
G PPYY
Sbjct: 409 GPPPYY 414
>ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X1 [Glycine max]
gi|571461885|ref|XP_006582134.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X2 [Glycine max]
Length = 444
Score = 70.5 bits (171), Expect = 3e-10
Identities = 38/71 (53%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Frame = -3
Query: 527 MGAAGRGPSLYGLPPSSAGM---GSGDYPGA-HYSLSG--GYQGQHNQPAGAFSAPRVPP 366
+G AG G S+Y LP S GM G+G YP + HY LS GYQ QH+ P+G PRVPP
Sbjct: 375 LGGAGGGSSMYRLP-GSGGMPAGGTGGYPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPP 433
Query: 365 GGAYQGMPPYY 333
G Y MPPYY
Sbjct: 434 GSMYPNMPPYY 444
>gb|ACN41154.1| unknown [Picea sitchensis]
Length = 446
Score = 68.2 bits (165), Expect = 2e-09
Identities = 35/60 (58%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Frame = -3
Query: 509 GPSLYGLPPSSAGMGSGDYP-GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAYQGMPPYY 333
G S+YG+PP+S SG YP G+HY LS YQ QH Q +G APRVP GG YQG PP+Y
Sbjct: 387 GGSMYGVPPTSGASQSGGYPEGSHYPLS-SYQNQHQQ-SGQSPAPRVPGGGVYQGGPPFY 444
>gb|ESW05187.1| hypothetical protein PHAVU_011G159400g [Phaseolus vulgaris]
Length = 438
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/68 (54%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGD-YP-GAHYSLSG--GYQGQHNQPAGAFSAPRVPPGGA 357
G +G SLY LP S A SG YP G HY LS GYQ QH+ P+GA PRVPPG
Sbjct: 371 GLSGGAGSLYRLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSM 430
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 431 YPNVPPYY 438
>gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nuclear-like protein
[Phaseolus vulgaris]
Length = 437
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/68 (54%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGD-YP-GAHYSLSG--GYQGQHNQPAGAFSAPRVPPGGA 357
G +G SLY LP S A SG YP G HY LS GYQ QH+ P+GA PRVPPG
Sbjct: 370 GLSGGAGSLYRLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSM 429
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 430 YPNVPPYY 437
>gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris]
Length = 438
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/68 (54%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGD-YP-GAHYSLSG--GYQGQHNQPAGAFSAPRVPPGGA 357
G +G SLY LP S A SG YP G HY LS GYQ QH+ P+GA PRVPPG
Sbjct: 371 GLSGGAGSLYRLPGSGAMPASGGGYPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSM 430
Query: 356 YQGMPPYY 333
Y +PPYY
Sbjct: 431 YPNVPPYY 438
>ref|XP_004294103.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 434
Score = 66.6 bits (161), Expect = 5e-09
Identities = 36/61 (59%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = -3
Query: 515 GRGPSLYGLPPSSAGMGSGDYP-GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAYQGMPP 339
G G SLYGLPPSS G+ SG YP G Y LS +Q QH+QP G PRVPPGG Y P
Sbjct: 376 GTGSSLYGLPPSSGGLPSGRYPEGGPYGLS-AFQNQHHQP-GTSPLPRVPPGGMYPSAPY 433
Query: 338 Y 336
Y
Sbjct: 434 Y 434
>ref|XP_004510069.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Cicer arietinum]
Length = 418
Score = 65.9 bits (159), Expect = 8e-09
Identities = 32/64 (50%), Positives = 38/64 (59%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGDYPGAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAYQGM 345
G G S+Y L SS GM +G YP + + S GYQ QH+ PAGA PRVPP Y +
Sbjct: 356 GGLGSAGSMYRLS-SSGGMQAGGYPESGHYSSSGYQNQHHPPAGASPVPRVPPSSMYPNV 414
Query: 344 PPYY 333
PPYY
Sbjct: 415 PPYY 418
>gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus persica]
Length = 345
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/56 (62%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = -3
Query: 491 LPPSSAGMGSGDYP-GAHYSL--SGGYQGQHNQPAGAFSAPRVPPGGAYQGMPPYY 333
LPPSS GMG G Y G HY L S G QH QP PRVPPGG YQGMPPYY
Sbjct: 293 LPPSSIGMGHGGYSDGPHYGLGASMGLPSQHQQPP---PVPRVPPGGLYQGMPPYY 345
>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis] gi|223538254|gb|EEF39863.1| Heterogeneous
nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 398
Score = 63.9 bits (154), Expect = 3e-08
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -3
Query: 509 GPSLYGLPPSSAGMGSGDYP-GAHYSLSGGYQGQHNQPAGAFSAPRVPPGGAYQGMPPYY 333
G S+Y + PSS GM SG YP GA Y LS Q +QP+ PRVPPGG YQGMPPYY
Sbjct: 346 GNSMYRMNPSSGGMASGGYPDGAAYGLS-----QPHQPSALL--PRVPPGGMYQGMPPYY 398
>ref|XP_006852453.1| hypothetical protein AMTR_s00021p00110500 [Amborella trichopoda]
gi|548856064|gb|ERN13920.1| hypothetical protein
AMTR_s00021p00110500 [Amborella trichopoda]
Length = 409
Score = 61.2 bits (147), Expect = 2e-07
Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Frame = -3
Query: 524 GAAGRGPSLYGLPPSSAGMGSGDYPGAHYSLSG--GYQGQHNQ--PAGAFSAPRVPPGGA 357
G +G G S+YGLPPSS G+GS PG + +LS YQ QH+ P+GA PRVP G A
Sbjct: 346 GGSGGG-SMYGLPPSSQGVGSYPEPGHYGALSSTTSYQSQHHHHPPSGASPVPRVPSGAA 404
Query: 356 YQGMPPYY 333
Y PPYY
Sbjct: 405 Y---PPYY 409
>ref|XP_006359092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
tuberosum]
Length = 424
Score = 60.8 bits (146), Expect = 3e-07
Identities = 37/71 (52%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Frame = -3
Query: 524 GAAGRGPSL-----YGLPPSSAGM-GSGDYP-GAHYSLSGGYQGQHNQPAGAFSAPRVPP 366
GA G G S Y +P SSAGM SG YP G +Y L Y Q QP + RVPP
Sbjct: 357 GAGGYGGSSGDYSGYRMPQSSAGMPSSGGYPDGGNYGLQSSYPSQVPQPG---AGSRVPP 413
Query: 365 GGAYQGMPPYY 333
GG YQGMPPYY
Sbjct: 414 GGMYQGMPPYY 424