BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018404
         (702 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein A...    41   4e-06
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    40   8e-06
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    40   8e-06
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    40   8e-06

>ref|XP_006482369.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 494

 Score = 40.8 bits (94), Expect(3) = 4e-06
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = -3

Query: 679 VGLQVRARLFKSSEAMRRLASDIIKLNLF*NNRDIILSIPLGHPNNLDKLIWHFEASGVC 500
           +G + +  +++ +E      +D+I+ N    +     SIPL    + D++IWH++  G  
Sbjct: 122 IGNREKISVYRDNE--NNWKTDLIQQNFVKEDAKADQSIPLPRRQSEDEVIWHYDKRGKY 179

Query: 499 TVKSGYIVALQ 467
           T+KSGY VAL+
Sbjct: 180 TMKSGYQVALK 190



 Score = 27.7 bits (60), Expect(3) = 4e-06
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 419 WRKLWNLHIPSKIKDFAW 366
           W  +W L +P+KIK F W
Sbjct: 208 WSVIWKLTLPAKIKIFIW 225



 Score = 27.7 bits (60), Expect(3) = 4e-06
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 312 HALRDCKDDLKVWNLSCLSSFYQQ 241
           HAL  CK   KVW LS ++S +Q+
Sbjct: 261 HALITCKAAKKVWQLSPMASSFQE 284


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Citrus sinensis]
          Length = 968

 Score = 39.7 bits (91), Expect(3) = 8e-06
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 616 DIIKLNLF*NNRDIILSIPLGHPNNLDKLIWHFEASGVCTVKSGYIVALQ 467
           D+I+ +    +   IL IPL    + D+++WH++  G  +VKSGY +ALQ
Sbjct: 587 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 636



 Score = 31.2 bits (69), Expect(3) = 8e-06
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 494 QIRLHSGTPN-PLPSGTGNSSLWFPWWRKLWNLHIPSKIKDFAWHVFSQM 348
           Q+ L    PN P  S   N+S     W  +W L IP K+K F W   + +
Sbjct: 632 QLALQMKFPNRPSSSKEDNNS-----WNSIWYLQIPEKVKIFMWRATNDL 676



 Score = 24.3 bits (51), Expect(3) = 8e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 333 SSRKQ*KHALRDCKDDLKVWNLS 265
           S R+   H+L DCK   K+W L+
Sbjct: 699 SHRETIFHSLFDCKASRKIWKLT 721


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score = 39.7 bits (91), Expect(3) = 8e-06
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 616 DIIKLNLF*NNRDIILSIPLGHPNNLDKLIWHFEASGVCTVKSGYIVALQ 467
           D+I+ +    +   IL IPL    + D+++WH++  G  +VKSGY +ALQ
Sbjct: 384 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 433



 Score = 31.2 bits (69), Expect(3) = 8e-06
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 494 QIRLHSGTPN-PLPSGTGNSSLWFPWWRKLWNLHIPSKIKDFAWHVFSQM 348
           Q+ L    PN P  S   N+S     W  +W L IP K+K F W   + +
Sbjct: 429 QLALQMKFPNRPSSSKEDNNS-----WNSIWYLQIPEKVKIFMWRATNDL 473



 Score = 24.3 bits (51), Expect(3) = 8e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 333 SSRKQ*KHALRDCKDDLKVWNLS 265
           S R+   H+L DCK   K+W L+
Sbjct: 496 SHRETIFHSLFDCKASRKIWKLT 518


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 39.7 bits (91), Expect(3) = 8e-06
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 616 DIIKLNLF*NNRDIILSIPLGHPNNLDKLIWHFEASGVCTVKSGYIVALQ 467
           D+I+ +    +   IL IPL    + D+++WH++  G  +VKSGY +ALQ
Sbjct: 384 DVIRQHFHQEDAAQILKIPLPRQLSPDQVLWHYDKKGNYSVKSGYQLALQ 433



 Score = 31.2 bits (69), Expect(3) = 8e-06
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 494 QIRLHSGTPN-PLPSGTGNSSLWFPWWRKLWNLHIPSKIKDFAWHVFSQM 348
           Q+ L    PN P  S   N+S     W  +W L IP K+K F W   + +
Sbjct: 429 QLALQMKFPNRPSSSKEDNNS-----WNSIWYLQIPEKVKIFMWRATNDL 473



 Score = 24.3 bits (51), Expect(3) = 8e-06
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 333 SSRKQ*KHALRDCKDDLKVWNLS 265
           S R+   H+L DCK   K+W L+
Sbjct: 496 SHRETIFHSLFDCKASRKIWKLT 518