BLASTX nr result

ID: Rehmannia24_contig00018289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018289
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGN03855.1| phytoene desaturase [Scutellaria baicalensis]           72   6e-11
gb|AHJ90428.1| phytoene desaturase, partial [Pogostemon cablin]        70   3e-10
gb|ACY78343.1| phytoene desaturase [Diospyros kaki]                    57   2e-06
gb|AGT45481.1| phytoene desaturase [Camellia sinensis]                 57   3e-06
gb|AHB32104.1| phytoene desaturase [Camellia sinensis]                 57   3e-06
gb|AGH32499.1| chloroplast phytoene desaturase [Catharanthus ros...    56   6e-06

>gb|AGN03855.1| phytoene desaturase [Scutellaria baicalensis]
          Length = 569

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/62 (61%), Positives = 43/62 (69%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGCALGQMNGLSFAFSDAMGHKLKIAARHAF 9
           MSQFGHVSA+NLSRQCN  +V           ++GQMNGLSF  SDAMGHKL+I   HAF
Sbjct: 1   MSQFGHVSAVNLSRQCNTLNV-----------SIGQMNGLSFVASDAMGHKLRIPMAHAF 49

Query: 8   TT 3
            T
Sbjct: 50  GT 51


>gb|AHJ90428.1| phytoene desaturase, partial [Pogostemon cablin]
          Length = 569

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 38/62 (61%), Positives = 43/62 (69%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGCALGQMNGLSFAFSDAMGHKLKIAARHAF 9
           MSQFGHVSA+NLS Q N+PSV+           +GQMNGLSFA SD MGHKL+I A  AF
Sbjct: 2   MSQFGHVSAVNLSGQYNMPSVF-----------VGQMNGLSFAVSDTMGHKLRIPAARAF 50

Query: 8   TT 3
            T
Sbjct: 51  GT 52


>gb|ACY78343.1| phytoene desaturase [Diospyros kaki]
          Length = 578

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/62 (48%), Positives = 40/62 (64%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGCALGQMNGLSFAFSDAMGHKLKIAARHAF 9
           MSQFGHVSA+NLS Q N+ + W+ QS W   C   Q N LSF  +D++G+ L+I   +A 
Sbjct: 1   MSQFGHVSALNLSGQSNLINFWNPQSTWI--CGSRQTNVLSFGGTDSVGYGLRIPNANAI 58

Query: 8   TT 3
            T
Sbjct: 59  RT 60


>gb|AGT45481.1| phytoene desaturase [Camellia sinensis]
          Length = 582

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGCALGQ--MNGLSFAFSDAMGHKLKIAARH 15
           MSQFG VS I++S Q N  SVW+ +S W  GC+ G      LSF  SD+MGH+ KI   +
Sbjct: 1   MSQFGQVSTISVSGQNNGISVWNPKSTWGCGCSFGSGPAKALSFRGSDSMGHRFKIPNAY 60

Query: 14  AFTT 3
           A  T
Sbjct: 61  AVGT 64


>gb|AHB32104.1| phytoene desaturase [Camellia sinensis]
          Length = 582

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGCALGQ--MNGLSFAFSDAMGHKLKIAARH 15
           MSQFG VS +++S Q N  SVW+ +S W  GC+ G      LSF  SD+MGH+ KI   +
Sbjct: 1   MSQFGQVSTVSVSGQNNGISVWNPKSTWGCGCSFGSGPAKALSFRGSDSMGHRFKIPNAY 60

Query: 14  AFTT 3
           A  T
Sbjct: 61  AVGT 64


>gb|AGH32499.1| chloroplast phytoene desaturase [Catharanthus roseus]
          Length = 582

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
 Frame = -1

Query: 188 MSQFGHVSAINLSRQCNIPSVWSSQSAWKNGC--ALGQMNGLSFAFSDAMGHKLKIAARH 15
           M+QFG VS +NL+ Q N+  V S  +A + GC  AL  MN LSFA SD+MGHK+K A  +
Sbjct: 1   MTQFGQVSTLNLTSQNNLVHVSSLLAAARGGCLFALKDMNTLSFARSDSMGHKVKFAIGN 60

Query: 14  AFT 6
             T
Sbjct: 61  TST 63


Top