BLASTX nr result
ID: Rehmannia24_contig00018257
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00018257
(775 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-... 137 5e-30
ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-... 134 3e-29
ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-... 127 3e-27
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida] 122 1e-25
gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus pe... 121 2e-25
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 117 6e-24
gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theob... 115 2e-23
gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus... 115 2e-23
ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Popu... 114 4e-23
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 110 7e-22
ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-... 108 2e-21
gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis] 108 2e-21
ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-... 107 6e-21
ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-... 107 6e-21
ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-... 106 8e-21
ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis t... 105 2e-20
dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsi... 105 2e-20
emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsi... 105 2e-20
emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsi... 105 2e-20
ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Caps... 103 5e-20
>ref|XP_006353313.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum tuberosum]
Length = 1117
Score = 137 bits (344), Expect = 5e-30
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++ N DF ++MD +N +D+TYLYKL PGVS RSFGFKVAQLAQLP +CI
Sbjct: 957 YHVSYLTSQRDVNWDFKSNEKMDHINSEDITYLYKLAPGVSGRSFGFKVAQLAQLPVACI 1016
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPQNCLQTAPIETLEEV 422
+RA+ +AA+LE VC + ++ +CS+ D ++ + L + L +E L+++
Sbjct: 1017 QRAIEIAAKLEAAVCNYTEQQIRRSCSLSHRQDGCKNEPTEDVLESDSLSAGRVEGLDDI 1076
Query: 421 EKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
+ YR+LF LN E +R L A+SLA +L++
Sbjct: 1077 SELYRELFLNLNFGFLEEHGDDRRLQFLMQARSLAAQLIS 1116
>ref|XP_004234387.1| PREDICTED: DNA mismatch repair protein MSH3-like [Solanum
lycopersicum]
Length = 1117
Score = 134 bits (337), Expect = 3e-29
Identities = 69/160 (43%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++ N DF ++MD +N +D+TYLYKL PGVS RSFGFKVAQLAQLP +CI
Sbjct: 957 YHVSYLTSQRDVNGDFKSNEKMDHINGEDITYLYKLAPGVSGRSFGFKVAQLAQLPVTCI 1016
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPQNCLQTAPIETLEEV 422
++A+ +AA+LE VC + + +CS+ D ++ + L + L +E L+++
Sbjct: 1017 QQAIVIAAKLEAAVCNYTEQQFRRSCSLSHRQDGCKNEPTEDVLESDSLSAGIVEGLDDI 1076
Query: 421 EKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
+ YR+LF LN A E +R L A+SLA +L++
Sbjct: 1077 SELYRELFMNLNYAYLEEHGNDRRLQFLMQARSLAAQLIS 1116
>ref|XP_006490371.1| PREDICTED: DNA mismatch repair protein MSH3-like [Citrus sinensis]
Length = 1087
Score = 127 bits (320), Expect = 3e-27
Identities = 73/159 (45%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT HK V MD+ + DVTYLYK+VPGVSE SFGFKVAQLAQLP SCI
Sbjct: 935 YHVSYLTSHK-------VMGPMDSKSDQDVTYLYKVVPGVSESSFGFKVAQLAQLPPSCI 987
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMP--IDKSEDAEKDAYLPQNCLQTAPIETLEEV 422
RA +AA+LE EV R +N+ + + D+ ++A+++ + +E E++
Sbjct: 988 SRATVIAAKLEAEVSSRVQNRSAKRDLLVKLSDQEQEAQENMPVSPESFYLGRVEASEDL 1047
Query: 421 EKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLL 305
+YRDLF L A H +++ AK F LKHA+S+A +L+
Sbjct: 1048 ISSYRDLFLNLKFATH-DDNPAKSFQFLKHARSIAKELI 1085
>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 846
Score = 122 bits (307), Expect = 1e-25
Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 5/163 (3%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT + D ++M+ +N +D+TYLYKL PGV+ERSFGFKVAQLAQLP +CI
Sbjct: 684 YHVSYLTSQGDVTGDCRSNEKMNYINSEDITYLYKLAPGVAERSFGFKVAQLAQLPVACI 743
Query: 595 RRAVAMAARLEVEVC-----KRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETL 431
+RA+ +A RLE VC R + S+N KS + D P + +
Sbjct: 744 QRAIVIAGRLEAAVCNYTEQSRIRRSYSINYRQDGCKSSEPVDDVLEPY-LSSAGSVNCI 802
Query: 430 EEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
+ + YR+LF +N AL E +RF L AKSLA +L++
Sbjct: 803 DNSSELYRELFLNINFALLEENGGDRRFQFLMQAKSLAAQLIS 845
>gb|EMJ20105.1| hypothetical protein PRUPE_ppa000560mg [Prunus persica]
Length = 1096
Score = 121 bits (304), Expect = 2e-25
Identities = 75/166 (45%), Positives = 100/166 (60%), Gaps = 8/166 (4%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVN----HDDVTYLYKLVPGVSERSFGFKVAQLAQLP 608
YHVSYLT +++ MDTV ++DVTYLYKLVPGVSERSFGFKVA+LAQLP
Sbjct: 940 YHVSYLTSNRD----------MDTVGMQSENEDVTYLYKLVPGVSERSFGFKVAELAQLP 989
Query: 607 SSCIRRAVAMAARLEVEVCKRDKNKLSMNC---SMPIDKSEDAEKDAYLPQNCLQTAPIE 437
SSCIR+A MAARLE V R +N+ N S+ D+ ++A+ + CL+
Sbjct: 990 SSCIRQATIMAARLEAVVNSRARNRHGKNWLLKSLVTDQKKEAQDEMLESPECLREGWSP 1049
Query: 436 TLEEVE-KAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
LEE AY+ F L A+ + +D K L HA+S+A +L++
Sbjct: 1050 VLEETNGGAYQKFFINLKAAIIDVDDPVKSCQYLNHARSIARELIS 1095
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 117 bits (292), Expect = 6e-24
Identities = 73/175 (41%), Positives = 98/175 (56%), Gaps = 7/175 (4%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQ-------EMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLA 617
YHVSY+ + ++D + ++ T++H+DVTYLYKLVPGVSERSFGFKVAQLA
Sbjct: 956 YHVSYMMSQRAMDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLA 1015
Query: 616 QLPSSCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIE 437
QLPSSCIRRA MAA LE + R KN + + +++ + C + E
Sbjct: 1016 QLPSSCIRRANVMAAELEAMIVSRVKNSSAQK------TLQGSQQSISIQSGCSRA---E 1066
Query: 436 TLEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLNSESV*RTWHL 272
+ E A R+ F L AL N D + LKHA+S+A +L+ S T HL
Sbjct: 1067 QIGLEEDACREFFLDLKSALGN-ADPERSLQFLKHARSIAKELIGSIGFLETLHL 1120
>gb|EOY23169.1| DNA mismatch repair protein MSH3 isoform 1 [Theobroma cacao]
Length = 1115
Score = 115 bits (288), Expect = 2e-23
Identities = 75/164 (45%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT H N E MD + +VTYLYKLVPGVS RSFGFKVAQLAQLPSSCI
Sbjct: 963 YHVSYLTAH-------NDEVTMDAKSDHEVTYLYKLVPGVSARSFGFKVAQLAQLPSSCI 1015
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQ------TAPIET 434
+A+ MA RLE R + K P S D E + +N L+ + +E
Sbjct: 1016 SQAIIMATRLEAIESSRVRKKSEER--QPETSSSDQELET--QENILKSIGSFSSERLEN 1071
Query: 433 LEEVEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
LEE A+ DL L A ++D+ K F LK A+S+A +L+N
Sbjct: 1072 LEEFASAFSDLLLNLKSA-RTDDDLGKSFQLLKEARSIAKELIN 1114
>gb|ESW15390.1| hypothetical protein PHAVU_007G069100g [Phaseolus vulgaris]
Length = 1075
Score = 115 bits (287), Expect = 2e-23
Identities = 71/160 (44%), Positives = 94/160 (58%), Gaps = 1/160 (0%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVS+LTPH + ++++ DVTYLYKL PGVS+RSFGFKVAQLAQLPS CI
Sbjct: 933 YHVSHLTPH---------DARKNSISDHDVTYLYKLAPGVSDRSFGFKVAQLAQLPSHCI 983
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RA+ MA++LE V R ++ + D + C+ L+E
Sbjct: 984 SRALVMASKLEALVNSRIHSRSGKELLL------DTLVIGQEQEQCMAQPHDRPLQEFGI 1037
Query: 415 AYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLANKLLNS 299
AY+D FYLNL A ++D AK F+ LKHA+S+A KL+ S
Sbjct: 1038 AYKD--FYLNLKAAIQDDDCAKSFHLLKHARSIAKKLIGS 1075
>ref|XP_002322465.2| hypothetical protein POPTR_0015s13240g [Populus trichocarpa]
gi|550322628|gb|EEF06592.2| hypothetical protein
POPTR_0015s13240g [Populus trichocarpa]
Length = 963
Score = 114 bits (285), Expect = 4e-23
Identities = 73/158 (46%), Positives = 99/158 (62%), Gaps = 1/158 (0%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT K +E DT +DVTYLYKLVPGVSE+SFGFKVAQLA+LP SCI
Sbjct: 818 YHVSYLTSEKSEGA---IESTCDT---EDVTYLYKLVPGVSEKSFGFKVAQLAELPPSCI 871
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQT-APIETLEEVE 419
RRA MAARLE + R N+ + ++P+ + E+A+ +N L++ IE E+
Sbjct: 872 RRATIMAARLEAVLSSRLGNEQLLE-TLPVQQQEEAQ------ENMLRSDVRIEKSEDST 924
Query: 418 KAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLL 305
AYR+ F L A+ ++DVA+ L+ A+S+A + L
Sbjct: 925 VAYREFFSNLKSAMF-DDDVARSSQFLEKARSIAKEFL 961
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 110 bits (274), Expect = 7e-22
Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 3/160 (1%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYL K N + +++DVTYLYKLVPGVSERSFGFKVAQLAQLP+SCI
Sbjct: 947 YHVSYLMAEK------NNDATDSKFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCI 1000
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMN---CSMPIDKSEDAEKDAYLPQNCLQTAPIETLEE 425
RA MAARLE + R +N+L + ++ ID+ ++ ++ IE EE
Sbjct: 1001 ERATVMAARLEEAISCRIRNRLDKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEE 1060
Query: 424 VEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLL 305
+ Y F AL ++ AK F L++A+S+A L+
Sbjct: 1061 LNNTYEKFFLNFKSALLGDD--AKSFQYLENARSIARALI 1098
>ref|XP_004496581.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Cicer
arietinum]
Length = 1076
Score = 108 bits (271), Expect = 2e-21
Identities = 68/159 (42%), Positives = 96/159 (60%), Gaps = 1/159 (0%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVS+LT H + + + N NH+DVTYLYKLVPGVSERSFGFKVAQLAQLPS CI
Sbjct: 936 YHVSHLTSHDDASKNSN--------NHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCI 987
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RA+ MA++LE V R + + ++ ++ P +C + +E +
Sbjct: 988 SRAIVMASKLEALVNNRIHGRSGKELLLDAPVIDEDQE----PHDCPR-------QEFGR 1036
Query: 415 AYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLANKLLN 302
AY++ FY NL A ++D AK F L++A+S+A L++
Sbjct: 1037 AYKE--FYSNLKAAILDDDHAKSFQLLENARSIAKSLIS 1073
>gb|EXC15971.1| DNA mismatch repair protein Msh3 [Morus notabilis]
Length = 1080
Score = 108 bits (270), Expect = 2e-21
Identities = 71/162 (43%), Positives = 96/162 (59%), Gaps = 3/162 (1%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHD---DVTYLYKLVPGVSERSFGFKVAQLAQLPS 605
YHVS+LT H+ +E T+N + DVTYLYKLVPGVSE+SFGFKVA+LAQLPS
Sbjct: 937 YHVSHLTSHRN--------EETGTMNSESDHDVTYLYKLVPGVSEKSFGFKVAELAQLPS 988
Query: 604 SCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEE 425
SCI RAV MA+RLE+ V R NK K E + ++ T +E+ +
Sbjct: 989 SCINRAVTMASRLEMVVSNRSANKCG--------KMHLLETSSLCQKDEKMTLEMESSKC 1040
Query: 424 VEKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLNS 299
++ Y++ F L AL + +D AK L A+ LAN+L++S
Sbjct: 1041 LD-GYKEFFLILKNAL-SVDDHAKSLQLLNQARGLANELISS 1080
>ref|XP_006606105.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X2 [Glycine
max]
Length = 991
Score = 107 bits (266), Expect = 6e-21
Identities = 73/161 (45%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
Frame = -1
Query: 775 YHVSYLTPH---KETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPS 605
YHVS+L H K +NLD DVTYLYKLVPGVSERSFGFKVAQLAQLPS
Sbjct: 844 YHVSHLISHDASKNSNLDH------------DVTYLYKLVPGVSERSFGFKVAQLAQLPS 891
Query: 604 SCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEE 425
CI RA+ MA++LE V R + + + +D ++ L L +E
Sbjct: 892 HCISRAIVMASKLEALVNSRIHGRSTK--ELLLDTLVIGQEKEQLMAQSLD----RPHKE 945
Query: 424 VEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLANKLL 305
+ AY+D FYLNL A ++D AK F+ L+HA+S+A KL+
Sbjct: 946 FDMAYKD--FYLNLKAATEDDDWAKSFHLLEHARSIAKKLI 984
>ref|XP_006606104.1| PREDICTED: DNA mismatch repair protein MSH3-like isoform X1 [Glycine
max]
Length = 1070
Score = 107 bits (266), Expect = 6e-21
Identities = 73/161 (45%), Positives = 94/161 (58%), Gaps = 4/161 (2%)
Frame = -1
Query: 775 YHVSYLTPH---KETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPS 605
YHVS+L H K +NLD DVTYLYKLVPGVSERSFGFKVAQLAQLPS
Sbjct: 923 YHVSHLISHDASKNSNLDH------------DVTYLYKLVPGVSERSFGFKVAQLAQLPS 970
Query: 604 SCIRRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEE 425
CI RA+ MA++LE V R + + + +D ++ L L +E
Sbjct: 971 HCISRAIVMASKLEALVNSRIHGRSTK--ELLLDTLVIGQEKEQLMAQSLD----RPHKE 1024
Query: 424 VEKAYRDLFFYLNL-ALHNEEDVAKRFNSLKHAKSLANKLL 305
+ AY+D FYLNL A ++D AK F+ L+HA+S+A KL+
Sbjct: 1025 FDMAYKD--FYLNLKAATEDDDWAKSFHLLEHARSIAKKLI 1063
>ref|XP_004308095.1| PREDICTED: DNA mismatch repair protein MSH3-like [Fragaria vesca
subsp. vesca]
Length = 1106
Score = 106 bits (265), Expect = 8e-21
Identities = 68/163 (41%), Positives = 95/163 (58%), Gaps = 5/163 (3%)
Frame = -1
Query: 775 YHVSYLTPHKETN-LDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSC 599
YHVSYLT ++ +D E E DVTYLYKLVPGVSERSFGFKVA+LAQLPSSC
Sbjct: 949 YHVSYLTSDRDRGTVDMTSENE-------DVTYLYKLVPGVSERSFGFKVAELAQLPSSC 1001
Query: 598 IRRAVAMAARLEVEVCKRDKNKL---SMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLE 428
IRRA MA RLE V +R+ ++ S+ S +D+ E+ E++ + E
Sbjct: 1002 IRRATFMADRLEAVVRRRESDRYGNKSLLRSPTMDQKEEVEEEMLGTTGNAYAGENQIKE 1061
Query: 427 EV-EKAYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLN 302
++ Y F L A+ + +D+ + L HA+S+A +L++
Sbjct: 1062 DIYGSEYNKFFLNLKTAI-SSDDLTENIRYLNHARSIAQELVS 1103
>ref|NP_194284.2| DNA mismatch repair protein MSH3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA
mismatch repair protein MSH3; Short=AtMSH3; AltName:
Full=MutS protein homolog 3 gi|3319876|emb|CAA07684.1|
Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein
MSH3 [Arabidopsis thaliana]
Length = 1081
Score = 105 bits (261), Expect = 2e-20
Identities = 69/156 (44%), Positives = 88/156 (56%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVAQLAQ+P SCI
Sbjct: 949 YHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCI 998
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RRA++MAA+LE EV R++ N M + + + A EE
Sbjct: 999 RRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------------EESIS 1038
Query: 415 AYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKL 308
A DLF L AL +EED K F LKHA +A K+
Sbjct: 1039 ALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAGKI 1073
>dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 386
Score = 105 bits (261), Expect = 2e-20
Identities = 69/156 (44%), Positives = 88/156 (56%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVAQLAQ+P SCI
Sbjct: 254 YHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCI 303
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RRA++MAA+LE EV R++ N M + + + A EE
Sbjct: 304 RRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------------EESIS 343
Query: 415 AYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKL 308
A DLF L AL +EED K F LKHA +A K+
Sbjct: 344 ALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAGKI 378
>emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 105 bits (261), Expect = 2e-20
Identities = 69/156 (44%), Positives = 88/156 (56%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVAQLAQ+P SCI
Sbjct: 944 YHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCI 993
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RRA++MAA+LE EV R++ N M + + + A EE
Sbjct: 994 RRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------------EESIS 1033
Query: 415 AYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKL 308
A DLF L AL +EED K F LKHA +A K+
Sbjct: 1034 ALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAGKI 1068
>emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 105 bits (261), Expect = 2e-20
Identities = 69/156 (44%), Positives = 88/156 (56%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSYLT ++++ + +HDDVTYLYKLV G+ RSFGFKVAQLAQ+P SCI
Sbjct: 944 YHVSYLT----------LQKDKGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCI 993
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RRA++MAA+LE EV R++ N M + + + A EE
Sbjct: 994 RRAISMAAKLEAEVRARER-----NTRMGEPEGHEEPRGA---------------EESIS 1033
Query: 415 AYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKL 308
A DLF L AL +EED K F LKHA +A K+
Sbjct: 1034 ALGDLFADLKFAL-SEEDPWKAFEFLKHAWKIAGKI 1068
>ref|XP_006283020.1| hypothetical protein CARUB_v10004012mg [Capsella rubella]
gi|482551725|gb|EOA15918.1| hypothetical protein
CARUB_v10004012mg [Capsella rubella]
Length = 1182
Score = 103 bits (258), Expect = 5e-20
Identities = 68/159 (42%), Positives = 87/159 (54%)
Frame = -1
Query: 775 YHVSYLTPHKETNLDFNVEQEMDTVNHDDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCI 596
YHVSY+T K+ + +HDDVTYLYKLV G+ RSFGFKVAQLAQ+PSSCI
Sbjct: 1037 YHVSYMTSQKDKS----------GFDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPSSCI 1086
Query: 595 RRAVAMAARLEVEVCKRDKNKLSMNCSMPIDKSEDAEKDAYLPQNCLQTAPIETLEEVEK 416
RRA+ MAA+LE EV R+K+ + P + ED P++ +LE
Sbjct: 1087 RRAITMAAKLEAEVRAREKSTRMESLKEPKNHEEDTVHGD--PEDS------TSLEGSIS 1138
Query: 415 AYRDLFFYLNLALHNEEDVAKRFNSLKHAKSLANKLLNS 299
F L LAL EED ++ F L A +A + L S
Sbjct: 1139 GLDGFFADLKLALSGEEDPSRSFEYLNLAWKIAEESLAS 1177