BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018214
         (1242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   251   6e-64
ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mit...   234   6e-59
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...   234   7e-59
ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   233   1e-58
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit...   231   6e-58
ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mit...   231   6e-58
gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]           227   7e-57
ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitoc...   224   4e-56
gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus...   221   5e-55
ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatul...   221   5e-55
ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [...   221   5e-55
ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Popu...   220   1e-54
ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mit...   217   7e-54
gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus pe...   217   7e-54
ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mit...   217   7e-54
ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thalian...   216   2e-53
ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Caps...   215   3e-53
ref|XP_002883182.1| pseudouridine synthase family protein [Arabi...   214   6e-53
gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theob...   213   1e-52
ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutr...   212   3e-52

>ref|XP_002282614.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial [Vitis
           vinifera] gi|296090438|emb|CBI40257.3| unnamed protein
           product [Vitis vinifera]
          Length = 476

 Score =  251 bits (640), Expect = 6e-64
 Identities = 123/185 (66%), Positives = 147/185 (79%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR  GLIS PL KVVVD+GKSERIT+VDN  T+S QH+ TEYRVI SS  GYTWLELSP
Sbjct: 291 PRRPRGLISAPLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSP 350

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+K  Q F S  +   D+ ++  K +  GL
Sbjct: 351 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGL 410

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +LE+GSI DKQP LHLHCK+M+LPN+SLALQ  ++ +    +++ES+   APLP+HMQRS
Sbjct: 411 DLESGSILDKQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRS 470

Query: 529 WDLLN 543
           WD+LN
Sbjct: 471 WDILN 475


>ref|XP_006346360.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like
           [Solanum tuberosum]
          Length = 467

 Score =  234 bits (597), Expect = 6e-59
 Identities = 117/185 (63%), Positives = 140/185 (75%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR  G+IS PL K+V+DNGKSERIT++ +    S Q++ TEYR+I SS  GYTWLELSP
Sbjct: 282 PRRSGGIISAPLGKLVLDNGKSERITIMSDVRAPSAQYAVTEYRIIGSSEKGYTWLELSP 341

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAE LGTPIVGDYKYGWQAH+KL       S L    ++ + K +   L
Sbjct: 342 LTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLGVQIPRQKPDPFNL 401

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRS 528
            L NGSISDKQP LHLHCKEM+LPNISLALQR +++S+     +ESI+L APLP HMQ+S
Sbjct: 402 RLGNGSISDKQPHLHLHCKEMVLPNISLALQRAQVVSDTDLVDVESIKLVAPLPFHMQKS 461

Query: 529 WDLLN 543
           WD L+
Sbjct: 462 WDCLS 466


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score =  234 bits (596), Expect = 7e-59
 Identities = 115/185 (62%), Positives = 144/185 (77%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR  +G+IS PL KVVVDNGKS+RITVV+N+  +S QH+ T Y+VI  S  GYTWL+LSP
Sbjct: 309 PRCSKGVISAPLRKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSP 368

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQ H+K  Q+  S  +   +D+  K K    GL
Sbjct: 369 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLNKDSNDETPKEKTLHFGL 428

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +LE+GSI +KQP LHLHCKEM LPN+S A+Q+ ++ S    +++ES++L APLP+HMQRS
Sbjct: 429 DLESGSILEKQPGLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLESLKLVAPLPSHMQRS 488

Query: 529 WDLLN 543
           WD+LN
Sbjct: 489 WDVLN 493


>ref|XP_004230733.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Solanum
           lycopersicum]
          Length = 467

 Score =  233 bits (594), Expect = 1e-58
 Identities = 117/185 (63%), Positives = 140/185 (75%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR  G+IS PL K+V+DNGKSERIT++ +    S Q++ TEYR+I SS  GYTWLELSP
Sbjct: 282 PRRSGGIISAPLGKLVLDNGKSERITIMSDVREPSAQYAVTEYRIIGSSEKGYTWLELSP 341

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAE LGTPIVGDYKYGWQAH+KL       S L    ++ + K +   L
Sbjct: 342 LTGRKHQLRVHCAEALGTPIVGDYKYGWQAHRKLKHLPLPTSVLNLVVEIPRQKPDPFNL 401

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRS 528
            L NGSISDKQP LHLHCKEM+LPNISLALQR +++S+     +ESI+L APLP HMQ+S
Sbjct: 402 RLGNGSISDKQPHLHLHCKEMVLPNISLALQRAQVVSDADLVDVESIKLVAPLPFHMQKS 461

Query: 529 WDLLN 543
           WD L+
Sbjct: 462 WDCLS 466


>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Citrus sinensis]
          Length = 275

 Score =  231 bits (588), Expect = 6e-58
 Identities = 113/185 (61%), Positives = 144/185 (77%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR  +G+IS PL KVVVDNGKS+RITVV+N+  +S QH+ T Y+VI  S  GYTWL+LSP
Sbjct: 90  PRCSKGVISAPLGKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSP 149

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQ H+K  Q+  S      ++++ K K    GL
Sbjct: 150 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGL 209

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +LE+GSI +KQP LHLHCKEM LPN+S A+Q+ ++ S    +++E+++L APLP+HMQRS
Sbjct: 210 DLESGSILEKQPRLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRS 269

Query: 529 WDLLN 543
           WD+LN
Sbjct: 270 WDVLN 274


>ref|XP_006486999.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Citrus sinensis] gi|568867349|ref|XP_006487000.1|
           PREDICTED: RNA pseudouridine synthase 4,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 362

 Score =  231 bits (588), Expect = 6e-58
 Identities = 113/185 (61%), Positives = 144/185 (77%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR  +G+IS PL KVVVDNGKS+RITVV+N+  +S QH+ T Y+VI  S  GYTWL+LSP
Sbjct: 177 PRCSKGVISAPLGKVVVDNGKSDRITVVNNDQIMSAQHAVTRYQVIKPSCHGYTWLKLSP 236

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQ H+K  Q+  S      ++++ K K    GL
Sbjct: 237 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQTHRKWKQFHPSDLSKDSNEEIPKEKTLHFGL 296

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +LE+GSI +KQP LHLHCKEM LPN+S A+Q+ ++ S    +++E+++L APLP+HMQRS
Sbjct: 297 DLESGSILEKQPRLHLHCKEMTLPNVSQAIQKVQLSSGCDVSKLETLKLVAPLPSHMQRS 356

Query: 529 WDLLN 543
           WD+LN
Sbjct: 357 WDVLN 361


>gb|EXB63685.1| RNA pseudourine synthase 4 [Morus notabilis]
          Length = 470

 Score =  227 bits (579), Expect = 7e-57
 Identities = 114/185 (61%), Positives = 139/185 (75%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR   GLIS PL KVV+DNGKS+RITVV+ +HTLS QH+ T+Y+VI SS  GYTWLELSP
Sbjct: 285 PRHPNGLISAPLRKVVLDNGKSDRITVVNGSHTLSSQHAITKYKVIGSSSHGYTWLELSP 344

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTP+VGDYKYGWQAH+          D K  + + K K+   GL
Sbjct: 345 LTGRKHQLRVHCAEVLGTPMVGDYKYGWQAHRDWKPLHWPDPDNKCIEVLPKRKNLPFGL 404

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
            ++NGSIS+K P LHLHCK+M+LPNIS  LQ  +  S    +++E ++LDAPLP++MQRS
Sbjct: 405 NMDNGSISEKHPRLHLHCKQMVLPNISHVLQNVQRYSDYELSRLERLKLDAPLPSYMQRS 464

Query: 529 WDLLN 543
           W L N
Sbjct: 465 WHLTN 469


>ref|XP_004511295.1| PREDICTED: RNA pseudourine synthase 4, mitochondrial-like [Cicer
           arietinum]
          Length = 458

 Score =  224 bits (572), Expect = 4e-56
 Identities = 115/187 (61%), Positives = 142/187 (75%), Gaps = 6/187 (3%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR  GLI+ PL KVVVDNGKS+RIT+V+N+  +S QH+ TEYRV+ SS  GYTWLELSP
Sbjct: 272 PRRSGGLITSPLGKVVVDNGKSDRITIVNNSTLVSSQHAVTEYRVLGSSSDGYTWLELSP 331

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKK G +F+  +     +++ K +    GL
Sbjct: 332 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKWG-HFDLCNLEDSTEELLKEETLPFGL 390

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS------NQMESIRLDAPLPAHMQ 522
            L  GSISDK P LHLHCK++ILPNIS ALQ  + +S      + +E+++L+A LP +MQ
Sbjct: 391 NLNKGSISDKHPRLHLHCKQIILPNISQALQDVQSLSASNCDLSVVEALKLEAELPPYMQ 450

Query: 523 RSWDLLN 543
           RSWD+ N
Sbjct: 451 RSWDVTN 457


>gb|ESW29223.1| hypothetical protein PHAVU_002G053600g [Phaseolus vulgaris]
          Length = 432

 Score =  221 bits (563), Expect = 5e-55
 Identities = 114/183 (62%), Positives = 140/183 (76%), Gaps = 4/183 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR  +GL++  L KVVVDNGKS+RITVVDN+ +LS QH+ TEYRVI+SS  GYTWLELSP
Sbjct: 248 PRCSKGLVTASLGKVVVDNGKSDRITVVDNSTSLSSQHAITEYRVIASSSQGYTWLELSP 307

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+K G +  S  +   ++ + K +    GL
Sbjct: 308 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGNFDLSNVEDSCEEHL-KEETLPFGL 366

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQRS 528
            L NGSIS+ +P LHLHCK+++LPNIS ALQ  +  SN    Q+E ++L A LP +MQRS
Sbjct: 367 NLNNGSISENRPRLHLHCKKIVLPNISEALQNVQSFSNCDLSQVEGLQLVADLPPYMQRS 426

Query: 529 WDL 537
           WD+
Sbjct: 427 WDI 429


>ref|XP_003635999.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355501934|gb|AES83137.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 430

 Score =  221 bits (563), Expect = 5e-55
 Identities = 114/188 (60%), Positives = 142/188 (75%), Gaps = 7/188 (3%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR  G+++ PL KVVVDNGKS+RIT+VDN+  LS QH+ TEYRVISSS  G+TWLELSP
Sbjct: 244 PRRSGGVVNAPLGKVVVDNGKSDRITIVDNSALLSSQHAVTEYRVISSSSHGFTWLELSP 303

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQY-FNSASDLKRDDKMTKVKHNIIG 357
           LTGRKHQLRVHCAEVLGTPIVGDYKYG QAHKK GQ+ F++  D    ++  K +    G
Sbjct: 304 LTGRKHQLRVHCAEVLGTPIVGDYKYGRQAHKKWGQFDFSNLED--STEEHLKEEALPFG 361

Query: 358 LELENGSISDKQPFLHLHCKEMILPNISLALQRGRIISNQ------MESIRLDAPLPAHM 519
           L L  GSISDK P LHLHCK+++LPNIS ALQ  + +S+       +ES+ L+A LP +M
Sbjct: 362 LNLNKGSISDKHPRLHLHCKQIVLPNISQALQNVQSVSDSSYDLSAVESLELEADLPPYM 421

Query: 520 QRSWDLLN 543
           ++SW++ N
Sbjct: 422 KKSWEVTN 429


>ref|XP_002518674.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223542055|gb|EEF43599.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 536

 Score =  221 bits (563), Expect = 5e-55
 Identities = 112/186 (60%), Positives = 144/186 (77%), Gaps = 5/186 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR++G+IS PL KVVVD+GKS+RITVV+N  + S QH+ T+YRV+ SS  GY WLELSP
Sbjct: 352 PRRQKGIISAPLGKVVVDDGKSDRITVVENAESTSFQHAVTQYRVMESS-HGYAWLELSP 410

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQY-FNSASDLKRDDKMTKVKHNIIG 357
           +TGRKHQLRVHCAEVLGTPIVGDYKYGWQ H+K  Q  F +   +  ++ + K K    G
Sbjct: 411 ITGRKHQLRVHCAEVLGTPIVGDYKYGWQVHRKWKQLPFPNLEKISNENALCK-KILPFG 469

Query: 358 LELENGSISDKQPFLHLHCKEMILPNISLALQRGRIISN----QMESIRLDAPLPAHMQR 525
           ++LE+GSIS+K P LHLHCK+M+LP++S AL+  +  SN     ++SI LDAPLP++MQR
Sbjct: 470 IDLESGSISEKHPRLHLHCKQMVLPDVSQALRGVQTSSNYDFSDLKSIELDAPLPSYMQR 529

Query: 526 SWDLLN 543
           SWD+LN
Sbjct: 530 SWDILN 535


>ref|XP_002313876.2| hypothetical protein POPTR_0009s09860g [Populus trichocarpa]
           gi|550331407|gb|EEE87831.2| hypothetical protein
           POPTR_0009s09860g [Populus trichocarpa]
          Length = 471

 Score =  220 bits (560), Expect = 1e-54
 Identities = 112/184 (60%), Positives = 140/184 (76%), Gaps = 4/184 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR +GLIS PL KVVVDNGKS+RITVV+N+  LS QH+ T+YRVI SS  G+TWLELSP
Sbjct: 287 PRRPKGLISAPLGKVVVDNGKSDRITVVENSQNLSSQHAVTQYRVIESS-HGFTWLELSP 345

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKY WQAH+   Q   S  +   +DK    K     L
Sbjct: 346 LTGRKHQLRVHCAEVLGTPIVGDYKYAWQAHRNWKQLQWSNIEDNSNDKSLSEKILPFAL 405

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +L++GSIS+K P LHLHCK+M+LP++S ALQ  ++ S    +Q+ S++ DAPLP +M++S
Sbjct: 406 DLDSGSISEKHPRLHLHCKQMVLPDVSKALQDVQLSSDYDFSQLASLKFDAPLPPYMKKS 465

Query: 529 WDLL 540
           WD+L
Sbjct: 466 WDIL 469


>ref|XP_006573909.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X2 [Glycine max]
          Length = 429

 Score =  217 bits (553), Expect = 7e-54
 Identities = 110/185 (59%), Positives = 137/185 (74%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR +GL++  L KVVVDNG+S+RIT+VDN+  +S QH+ TEYRVI+SS  GYTWLEL+P
Sbjct: 245 PRRPKGLVTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTP 304

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+K G +     +  R++ + + K    GL
Sbjct: 305 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLP-FGL 363

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
            L  GSIS+  P LHLHCK+M+LPNIS ALQ  +  S    + +E + L A LP +MQRS
Sbjct: 364 NLNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRS 423

Query: 529 WDLLN 543
           WD+ N
Sbjct: 424 WDVTN 428


>gb|EMJ01009.1| hypothetical protein PRUPE_ppa004969mg [Prunus persica]
          Length = 483

 Score =  217 bits (553), Expect = 7e-54
 Identities = 106/185 (57%), Positives = 140/185 (75%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PR+R+GLIS PL KVVVDNGKS+RIT+V+++ TL  QH+ T+Y+VI S   GYTWLEL+P
Sbjct: 298 PRQRKGLISAPLGKVVVDNGKSDRITIVNDSQTLPSQHAITKYKVIGSPCPGYTWLELTP 357

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVL TPIVGDYKYGWQ H+       S ++   D++  K K+    L
Sbjct: 358 LTGRKHQLRVHCAEVLRTPIVGDYKYGWQTHRNWKPLAWSNNECHSDEEFPKRKNLPFDL 417

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
            +E+GS+S+K P LHLHCK+M+LPN++LALQ  ++ S    +++ES+ L A LP+ MQRS
Sbjct: 418 NMESGSVSEKNPRLHLHCKQMVLPNVNLALQNVKLHSDSDLSELESLELVAALPSFMQRS 477

Query: 529 WDLLN 543
           W++ N
Sbjct: 478 WNITN 482


>ref|XP_003516775.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 427

 Score =  217 bits (553), Expect = 7e-54
 Identities = 110/185 (59%), Positives = 137/185 (74%), Gaps = 4/185 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR +GL++  L KVVVDNG+S+RIT+VDN+  +S QH+ TEYRVI+SS  GYTWLEL+P
Sbjct: 243 PRRPKGLVTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTP 302

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH+K G +     +  R++ + + K    GL
Sbjct: 303 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLP-FGL 361

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
            L  GSIS+  P LHLHCK+M+LPNIS ALQ  +  S    + +E + L A LP +MQRS
Sbjct: 362 NLNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRS 421

Query: 529 WDLLN 543
           WD+ N
Sbjct: 422 WDVTN 426


>ref|NP_188575.1| RNA pseudourine synthase 4 [Arabidopsis thaliana]
           gi|75274073|sp|Q9LT72.1|PUS4_ARATH RecName: Full=RNA
           pseudouridine synthase 4, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 4; AltName:
           Full=RNA-uridine isomerase 4; Flags: Precursor
           gi|11994467|dbj|BAB02469.1| unnamed protein product
           [Arabidopsis thaliana] gi|110737723|dbj|BAF00800.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|134031916|gb|ABO45695.1| At3g19440 [Arabidopsis
           thaliana] gi|332642719|gb|AEE76240.1| RNA pseudourine
           synthase 4 [Arabidopsis thaliana]
          Length = 477

 Score =  216 bits (549), Expect = 2e-53
 Identities = 109/184 (59%), Positives = 135/184 (73%), Gaps = 4/184 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           P R+ G IS PL KVVVD+GKSERITV DN   +S QH+ TEYRVI SSP GYTWLEL P
Sbjct: 290 PPRQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRP 349

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK    + +S      ++  TK   +  GL
Sbjct: 350 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSS------ENNPTKQSSSPFGL 403

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +L+ G +S KQP LHLH K++ LPNIS  L++ ++ S    + ++S++ DAPLP+HMQ S
Sbjct: 404 DLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLS 463

Query: 529 WDLL 540
           ++LL
Sbjct: 464 FNLL 467


>ref|XP_006297582.1| hypothetical protein CARUB_v10013603mg [Capsella rubella]
           gi|482566291|gb|EOA30480.1| hypothetical protein
           CARUB_v10013603mg [Capsella rubella]
          Length = 476

 Score =  215 bits (547), Expect = 3e-53
 Identities = 109/184 (59%), Positives = 134/184 (72%), Gaps = 4/184 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR+ G IS PL KVVVD+GKS+RITV DN   +S QH+ TEYRVI SSP GYTWLEL P
Sbjct: 289 PRRQRGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRP 348

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHK       S      ++  TK + +  GL
Sbjct: 349 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKSREPLVTS------ENTPTKPQSSPFGL 402

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +L+ G +S KQP LHLH K++ LPNIS  L++ ++ S    + ++S++ DAPLP HMQ S
Sbjct: 403 DLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDIDSLKFDAPLPTHMQLS 462

Query: 529 WDLL 540
           ++LL
Sbjct: 463 FNLL 466


>ref|XP_002883182.1| pseudouridine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297329022|gb|EFH59441.1| pseudouridine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 477

 Score =  214 bits (545), Expect = 6e-53
 Identities = 107/184 (58%), Positives = 136/184 (73%), Gaps = 4/184 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR++G IS PL KVVVD+GKS+RITV DN   +S QH+ TEY+VI SSP GYTWLEL P
Sbjct: 290 PRRQKGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYKVIESSPHGYTWLELRP 349

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPI+GDYKYGWQAHK    + +S      +   TK   +  GL
Sbjct: 350 LTGRKHQLRVHCAEVLGTPILGDYKYGWQAHKAREPFVSS------ETTPTKPSSSPFGL 403

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQRS 528
           +L+ G +S KQP LHLH K++ LPNIS  L++ ++ S    + ++S++ DAPLP+HMQ S
Sbjct: 404 DLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSDSDISDLDSLKFDAPLPSHMQLS 463

Query: 529 WDLL 540
           ++LL
Sbjct: 464 FNLL 467


>gb|EOX98365.1| Ribosomal pseudouridine synthase, putative [Theobroma cacao]
          Length = 477

 Score =  213 bits (543), Expect = 1e-52
 Identities = 107/187 (57%), Positives = 142/187 (75%), Gaps = 6/187 (3%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR +G+I  PL KVVVD+GKS+RITV DN+  +S Q + TEY+VI ++  GYTWLELSP
Sbjct: 292 PRRPKGMIVAPLRKVVVDDGKSDRITVFDNSQIVSSQRAKTEYQVIKTTSHGYTWLELSP 351

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKR--DDKMTKVKHNII 354
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAH++        SDLK+  +DK  +      
Sbjct: 352 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRRWQHL--PESDLKKSSNDKCPEENMLPF 409

Query: 355 GLELENGSISDKQPFLHLHCKEMILPNISLALQRGRIIS----NQMESIRLDAPLPAHMQ 522
           GL +++GSIS K+P LHLHC+EMI PN+S ALQ  ++ +    ++++S+ + APLP++MQ
Sbjct: 410 GLNMDSGSISAKRPRLHLHCREMIFPNVSQALQNLQLSTDHDLSKLKSLEVVAPLPSYMQ 469

Query: 523 RSWDLLN 543
           +SWD++N
Sbjct: 470 KSWDIMN 476


>ref|XP_006406501.1| hypothetical protein EUTSA_v10020633mg [Eutrema salsugineum]
           gi|557107647|gb|ESQ47954.1| hypothetical protein
           EUTSA_v10020633mg [Eutrema salsugineum]
          Length = 477

 Score =  212 bits (539), Expect = 3e-52
 Identities = 108/184 (58%), Positives = 133/184 (72%), Gaps = 4/184 (2%)
 Frame = +1

Query: 1   PRRREGLISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSP 180
           PRR+ G IS PL KVVVD+GKS+RITV DN   +S QH+ TEYRVI SSP GYTWLEL P
Sbjct: 290 PRRQRGQISAPLRKVVVDDGKSDRITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRP 349

Query: 181 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKVKHNIIGL 360
           LTGRKHQLRVHCAEVLGTPI+GDYKYGWQAHK    + +S       +  TK   +  GL
Sbjct: 350 LTGRKHQLRVHCAEVLGTPILGDYKYGWQAHKSREPFVSSG------NTPTKPSLSPFGL 403

Query: 361 ELENGSISDKQPFLHLHCKEMILPNISLALQRGRII----SNQMESIRLDAPLPAHMQRS 528
           +L+ G +S KQP LHLH K++ LPNIS  L++  +     S++ + ++ DAPLPAHMQ S
Sbjct: 404 DLDGGDVSSKQPHLHLHSKQIDLPNISQLLEQLEVSSDSDSSEHDCLKFDAPLPAHMQLS 463

Query: 529 WDLL 540
           ++LL
Sbjct: 464 FNLL 467