BLASTX nr result

ID: Rehmannia24_contig00018070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00018070
         (357 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306429.1| hypothetical protein POPTR_0005s10440g [Popu...    80   3e-13
gb|ABK94286.1| unknown [Populus trichocarpa]                           80   3e-13
gb|EPS70747.1| high mobility group family, partial [Genlisea aurea]    79   6e-13
gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]        77   2e-12
gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirs...    77   2e-12
ref|XP_002306980.2| hypothetical protein POPTR_0005s27390g [Popu...    77   3e-12
gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirs...    77   3e-12
ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus...    76   4e-12
gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform...    76   5e-12
ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-li...    75   7e-12
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...    75   7e-12
emb|CBI37645.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_006343329.1| PREDICTED: HMG1/2-like protein-like [Solanum...    75   9e-12
ref|XP_006386135.1| hypothetical protein POPTR_0002s01000g [Popu...    75   9e-12
gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlise...    75   9e-12
gb|EMJ03788.1| hypothetical protein PRUPE_ppa011596mg [Prunus pe...    75   9e-12
gb|EMJ03787.1| hypothetical protein PRUPE_ppa011596mg [Prunus pe...    75   9e-12
gb|EMJ03786.1| hypothetical protein PRUPE_ppa011596mg [Prunus pe...    75   9e-12
gb|EMJ03785.1| hypothetical protein PRUPE_ppa011596mg [Prunus pe...    75   9e-12
gb|EMJ03784.1| hypothetical protein PRUPE_ppa011596mg [Prunus pe...    75   9e-12

>ref|XP_002306429.1| hypothetical protein POPTR_0005s10440g [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| hypothetical protein
           POPTR_0005s10440g [Populus trichocarpa]
          Length = 144

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFRKQYKE HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 44  SAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSE 83


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 37/40 (92%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFRKQYKE HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 44  SAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSE 83


>gb|EPS70747.1| high mobility group family, partial [Genlisea aurea]
          Length = 152

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSEE 356
           SAFF+FMEDFRK YKE HP NKSVAAVGKAGGD+WKS+SEE
Sbjct: 41  SAFFIFMEDFRKHYKEKHPNNKSVAAVGKAGGDKWKSMSEE 81


>gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
          Length = 146

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKSLSE
Sbjct: 44  SAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSE 83


>gb|ADO34793.1| high mobility group box 2 protein [Gossypium hirsutum]
          Length = 146

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKSLSE
Sbjct: 44  SAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLSE 83


>ref|XP_002306980.2| hypothetical protein POPTR_0005s27390g [Populus trichocarpa]
           gi|550339856|gb|EEE93976.2| hypothetical protein
           POPTR_0005s27390g [Populus trichocarpa]
          Length = 159

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK  HPKNKSVAAVGKAGGD+WKSLSE
Sbjct: 49  SAFFVFMEEFREQYKREHPKNKSVAAVGKAGGDKWKSLSE 88


>gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
          Length = 142

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKSLSE
Sbjct: 40  SAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSLSE 79


>ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 145

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKS+SE
Sbjct: 43  SAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRWKSMSE 82


>gb|EOY15292.1| High mobility group B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma
           cacao] gi|508723396|gb|EOY15293.1| High mobility group
           B2, BETA 1,NFD2,NFD02 isoform 1 [Theobroma cacao]
          Length = 147

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/40 (85%), Positives = 39/40 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKS+SE
Sbjct: 44  SAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWKSMSE 83


>ref|XP_003631923.1| PREDICTED: high mobility group B2 protein-like isoform 2 [Vitis
           vinifera]
          Length = 125

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FRKQYKE HP NKSV+ VGKAGGD+WKSLSE
Sbjct: 52  SAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSE 91


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FRKQYKE HP NKSV+ VGKAGGD+WKSLSE
Sbjct: 52  SAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSE 91


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FRKQYKE HP NKSV+ VGKAGGD+WKSLSE
Sbjct: 50  SAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSE 89


>ref|XP_006343329.1| PREDICTED: HMG1/2-like protein-like [Solanum tuberosum]
          Length = 139

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFRKQYKE HP NKSVAAVGKAGGD+WK L++
Sbjct: 41  SAFFVFMEDFRKQYKEKHPGNKSVAAVGKAGGDKWKHLTD 80


>ref|XP_006386135.1| hypothetical protein POPTR_0002s01000g [Populus trichocarpa]
           gi|550344021|gb|ERP63932.1| hypothetical protein
           POPTR_0002s01000g [Populus trichocarpa]
          Length = 151

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/39 (87%), Positives = 38/39 (97%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLS 350
           SAFFVFME+FR+QYK+ HPKNKSVAAVGKAGGD+WKSLS
Sbjct: 48  SAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKWKSLS 86


>gb|EPS64999.1| hypothetical protein M569_09780, partial [Genlisea aurea]
          Length = 152

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFME+FRK YKE HP NKSVAAVGKAGGD+WKSLS+
Sbjct: 50  SAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDKWKSLSD 89


>gb|EMJ03788.1| hypothetical protein PRUPE_ppa011596mg [Prunus persica]
          Length = 202

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFR++YK+ HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 100 SAFFVFMEDFREKYKKEHPNNKSVAAVGKAGGDKWKSLSE 139


>gb|EMJ03787.1| hypothetical protein PRUPE_ppa011596mg [Prunus persica]
          Length = 173

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFR++YK+ HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 100 SAFFVFMEDFREKYKKEHPNNKSVAAVGKAGGDKWKSLSE 139


>gb|EMJ03786.1| hypothetical protein PRUPE_ppa011596mg [Prunus persica]
          Length = 204

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFR++YK+ HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 100 SAFFVFMEDFREKYKKEHPNNKSVAAVGKAGGDKWKSLSE 139


>gb|EMJ03785.1| hypothetical protein PRUPE_ppa011596mg [Prunus persica]
          Length = 155

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFR++YK+ HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 100 SAFFVFMEDFREKYKKEHPNNKSVAAVGKAGGDKWKSLSE 139


>gb|EMJ03784.1| hypothetical protein PRUPE_ppa011596mg [Prunus persica]
           gi|462398121|gb|EMJ03789.1| hypothetical protein
           PRUPE_ppa011596mg [Prunus persica]
          Length = 147

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +3

Query: 234 SAFFVFMEDFRKQYKEMHPKNKSVAAVGKAGGDQWKSLSE 353
           SAFFVFMEDFR++YK+ HP NKSVAAVGKAGGD+WKSLSE
Sbjct: 43  SAFFVFMEDFREKYKKEHPNNKSVAAVGKAGGDKWKSLSE 82


Top