BLASTX nr result

ID: Rehmannia24_contig00016948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00016948
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS60413.1| hypothetical protein M569_14391, partial [Genlise...    70   2e-10
ref|XP_006362862.1| PREDICTED: methyl-CpG-binding domain-contain...    64   2e-08
ref|XP_004251081.1| PREDICTED: methyl-CpG-binding domain-contain...    62   6e-08
gb|EXC10657.1| Methyl-CpG-binding domain-containing protein 6 [M...    58   1e-06
ref|XP_006424834.1| hypothetical protein CICLE_v10029152mg [Citr...    58   1e-06
ref|XP_002532846.1| DNA binding protein, putative [Ricinus commu...    56   4e-06
ref|XP_004294545.1| PREDICTED: methyl-CpG-binding domain-contain...    56   6e-06

>gb|EPS60413.1| hypothetical protein M569_14391, partial [Genlisea aurea]
          Length = 216

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = +1

Query: 4   IDRYYVEPTGQRKFRSKNEVLHFLETGNKKKRKPTSEAD 120
           IDRYY EPTGQR+FRSK EVLHFLE+G ++KRKPTSEA+
Sbjct: 115 IDRYYAEPTGQRRFRSKTEVLHFLESGGQRKRKPTSEAN 153


>ref|XP_006362862.1| PREDICTED: methyl-CpG-binding domain-containing protein 5-like
           [Solanum tuberosum]
          Length = 245

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 41/83 (49%), Positives = 50/83 (60%), Gaps = 8/83 (9%)
 Frame = +1

Query: 4   IDRYYVEPTGQRKFRSKNEVLHFLETGNKKKRKPT-SEADAAPSE------QKKSSTKRK 162
           +DRYY EP    KFRSK EVL+FLETG K+K+  T S  DA PSE      QKKS +K K
Sbjct: 122 VDRYYYEPVSGSKFRSKTEVLYFLETGGKRKKAITGSGTDATPSETPPIKKQKKSISKTK 181

Query: 163 KPEAVKSDIKH-PEYANGVKTDT 228
           K  +   D  + P+    V+TDT
Sbjct: 182 KVTSFYFDSGNPPQSVCWVQTDT 204


>ref|XP_004251081.1| PREDICTED: methyl-CpG-binding domain-containing protein 5-like
           [Solanum lycopersicum]
          Length = 248

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/86 (47%), Positives = 50/86 (58%), Gaps = 11/86 (12%)
 Frame = +1

Query: 4   IDRYYVEPTGQRKFRSKNEVLHFLETGNKKKRKPT----SEADAAPSE------QKKSST 153
           +DRYY EP    KFRSK EVL+FLETG K+K+  T    S  DA PSE      QKKS +
Sbjct: 122 VDRYYYEPVTGSKFRSKTEVLYFLETGGKRKKAITGTTGSGTDATPSETPPIKKQKKSIS 181

Query: 154 KRKKPEAVKSDIKH-PEYANGVKTDT 228
           K KK  +   D  + P+    V+TDT
Sbjct: 182 KTKKVTSFYFDSGNPPQSVCWVQTDT 207


>gb|EXC10657.1| Methyl-CpG-binding domain-containing protein 6 [Morus notabilis]
          Length = 237

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 8/85 (9%)
 Frame = +1

Query: 7   DRYYVEPTGQRKFRSKNEVLHFLETGNKKKRKPT---SEADAAP----SEQKKSSTKRKK 165
           DRYY +P    KFRSK EVL+FLETG ++K K T   S+A+  P     EQK++S+  KK
Sbjct: 118 DRYYFDPVSGLKFRSKKEVLYFLETGIRRKHKKTTEISDAEITPMDSSGEQKQNSSTSKK 177

Query: 166 PEAVKSDIKH-PEYANGVKTDTRQE 237
             A+  +    PE    V +D+  E
Sbjct: 178 GSALNFNFSRVPEKVKWVLSDSSGE 202


>ref|XP_006424834.1| hypothetical protein CICLE_v10029152mg [Citrus clementina]
           gi|568870279|ref|XP_006488333.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 6-like
           [Citrus sinensis] gi|557526768|gb|ESR38074.1|
           hypothetical protein CICLE_v10029152mg [Citrus
           clementina]
          Length = 248

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
 Frame = +1

Query: 4   IDRYYVEPTGQRKFRSKNEVLHFLETGNK-KKRKPTSEADAAPSEQKKSSTKRKKP 168
           +D+YY      R+FRSK EVL+FLETG K K+RK  S AD   S     STK+KKP
Sbjct: 127 VDKYYFHVASGRRFRSKKEVLYFLETGTKRKRRKENSNADMDSSGSAAGSTKQKKP 182


>ref|XP_002532846.1| DNA binding protein, putative [Ricinus communis]
           gi|223527383|gb|EEF29524.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 234

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
 Frame = +1

Query: 4   IDRYYVEPTGQRKFRSKNEVLHFLETGNKKKRK---PTSEADAAPSEQKKSSTKRKKPEA 174
           +D+YY+EP   R+FRSK EV +FLETG KKK K     SE D   +E   S   +K  + 
Sbjct: 120 VDKYYIEPVTGRRFRSKKEVQYFLETGTKKKTKRGMENSEGDVNFTESPGSQKSKKASKN 179

Query: 175 VKSDIKHPEYAN 210
            K   ++ +Y N
Sbjct: 180 AKVQKRNFDYLN 191


>ref|XP_004294545.1| PREDICTED: methyl-CpG-binding domain-containing protein 5-like
           [Fragaria vesca subsp. vesca]
          Length = 209

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = +1

Query: 7   DRYYVEPTGQRKFRSKNEVLHFLETGNKKKR---KPTSEADAAPSEQKKSSTK 156
           DRYY +P   R+FRSK EVLHFLETG  KK      T+   +A   Q+KSSTK
Sbjct: 96  DRYYHDPVSGRRFRSKKEVLHFLETGTPKKNTNSDKTTVESSASKRQRKSSTK 148


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