BLASTX nr result
ID: Rehmannia24_contig00016793
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00016793
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 108 3e-29
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo] 113 9e-29
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom... 108 3e-28
gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus pe... 105 5e-28
gb|EOY21520.1| CCHC-type integrase, putative [Theobroma cacao] 107 6e-28
emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group] 105 9e-28
gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobrom... 106 1e-27
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao] 106 1e-27
gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subc... 105 1e-27
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 103 1e-27
gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subc... 104 2e-27
ref|XP_006596826.1| PREDICTED: uncharacterized protein LOC102662... 104 2e-27
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom... 105 2e-27
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 105 2e-27
gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobrom... 105 2e-27
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc... 104 2e-27
gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group] 103 2e-27
gb|AAL69429.1|AC098565_11 Putative polyprotein [Oryza sativa] gi... 104 3e-27
gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subc... 104 3e-27
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc... 104 3e-27
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 108 bits (269), Expect(3) = 3e-29
Identities = 52/111 (46%), Positives = 71/111 (63%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E Q +K VSAPI + + EGF +Y A G GCVLMQNGKV+AYASR+LK H
Sbjct: 1278 ECERSFQTLKDKLVSAPILSLPDGLEGFVVYCDASRVGLGCVLMQNGKVIAYASRQLKVH 1337
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYLY +++ DH+ L+Y + Q +R
Sbjct: 1338 EKNYPTHDLELAAVVFALKIWRHYLYGVHVDVFTDHKSLQYVFTQKDLNLR 1388
Score = 42.4 bits (98), Expect(3) = 3e-29
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2
Query: 53 IADPMTQLTRKSEKFVWTEKCERSFK 130
IA PMT+LT+K KF WT++CERSF+
Sbjct: 1259 IASPMTKLTQKKAKFEWTDECERSFQ 1284
Score = 24.3 bits (51), Expect(3) = 3e-29
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLS 50
F G+ YYRRF+ G S
Sbjct: 1242 FLGLAGYYRRFVNGFS 1257
>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
Length = 923
Score = 113 bits (282), Expect(2) = 9e-29
Identities = 54/105 (51%), Positives = 75/105 (71%)
Frame = +1
Query: 127 QIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPT 306
Q +KQ V+AP+ + + + F IYS A ++G GCVLMQ GKVVAYASR+LK HE NYPT
Sbjct: 268 QTLKQKLVTAPVLTVPDGSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPT 327
Query: 307 CNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
+L++ AV++ L+I HYLY K +I+ DH+ LKYF+ Q + +R
Sbjct: 328 HDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMR 372
Score = 40.0 bits (92), Expect(2) = 9e-29
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + +IA P+TQLTRK FVW++ CE SF+
Sbjct: 226 FLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ 268
>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 666
Score = 108 bits (269), Expect(3) = 3e-28
Identities = 49/103 (47%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP N
Sbjct: 117 LKACLTTAPVLSLPQGTGGYTVFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHN 176
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 177 LEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 219
Score = 38.1 bits (87), Expect(3) = 3e-28
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 89 KIVAPLTKLTRKDTKFEWSDACENSFE 115
Score = 25.4 bits (54), Expect(3) = 3e-28
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 73 FVGLAGYYRRFVKDFSK 89
>gb|EMJ14281.1| hypothetical protein PRUPE_ppa021229mg [Prunus persica]
Length = 1194
Score = 105 bits (262), Expect(3) = 5e-28
Identities = 48/103 (46%), Positives = 72/103 (69%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K +AP+ + + + F IYS A +QG GCVLMQ+G+V+AYASR+LK+HELNYP +
Sbjct: 542 LKTRLTTAPVLALPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHD 601
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ AV++ L+I HYLY +I+ DH+ LKY + Q + +R
Sbjct: 602 LELAAVVFALKIWRHYLYGETCQIFTDHKSLKYLFTQKELNLR 644
Score = 40.8 bits (94), Expect(3) = 5e-28
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +2
Query: 53 IADPMTQLTRKSEKFVWTEKCERSF 127
IA P+T LTRK KFVW++KCE SF
Sbjct: 515 IAAPLTYLTRKGVKFVWSDKCEESF 539
Score = 24.6 bits (52), Expect(3) = 5e-28
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLS 50
F G+ YYRRF++G S
Sbjct: 498 FLGLAGYYRRFVEGFS 513
>gb|EOY21520.1| CCHC-type integrase, putative [Theobroma cacao]
Length = 508
Score = 107 bits (266), Expect(3) = 6e-28
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 337 LKACLTTAPVLSLPQGTRGYTVFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHD 396
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 397 LEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 439
Score = 38.1 bits (87), Expect(3) = 6e-28
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 309 KIVAPLTKLTRKDTKFEWSDACENSFE 335
Score = 25.4 bits (54), Expect(3) = 6e-28
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 293 FVGLAGYYRRFVKDFSK 309
>emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
Length = 1466
Score = 105 bits (263), Expect(2) = 9e-28
Identities = 52/111 (46%), Positives = 74/111 (66%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+GF IY A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 894 ECNRSFEELKRRLVSAPVLILPDQTKGFQIYCDASRQGLGCVLMQDGKVVSYASRQLRPH 953
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL + E+Y DH+ LKY + Q +R
Sbjct: 954 EGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLR 1004
Score = 43.9 bits (102), Expect(2) = 9e-28
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 858 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFE 900
>gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 878
Score = 106 bits (264), Expect(3) = 1e-27
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 400 LKACLTTAPVLSLPQGTGGYTVFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHD 459
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 460 LEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 502
Score = 38.1 bits (87), Expect(3) = 1e-27
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 372 KIVAPLTKLTRKDTKFEWSDACENSFE 398
Score = 25.4 bits (54), Expect(3) = 1e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 356 FVGLAGYYRRFVKDFSK 372
>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
Length = 860
Score = 106 bits (264), Expect(3) = 1e-27
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 234 LKACLTTAPVLSLPQGTRGYTVFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHD 293
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 294 LEMAAIVFALKIWRHYLYGETCEIYMDHKSLKYIFQQRDLNLR 336
Score = 38.1 bits (87), Expect(3) = 1e-27
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 206 KIVAPLTKLTRKDTKFEWSDACENSFE 232
Score = 25.4 bits (54), Expect(3) = 1e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 190 FVGLAGYYRRFVKDFSK 206
>gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 105 bits (263), Expect(2) = 1e-27
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = +1
Query: 127 QIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPT 306
Q +K+ VS+P+ + +T + F +Y A QG GCVLMQ+G VVAYASR+L+ HE NYPT
Sbjct: 1185 QTLKEKLVSSPVLILPDTRKDFVVYYDASRQGLGCVLMQDGHVVAYASRQLRPHEGNYPT 1244
Query: 307 CNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
+L++ AV++ L+I HYL +YEIY DH+ LKY + Q +R
Sbjct: 1245 HDLELAAVVHALKIWRHYLIGNRYEIYTDHKSLKYIFTQSDLNLR 1289
Score = 43.5 bits (101), Expect(2) = 1e-27
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKFVW+ +CE++F+
Sbjct: 1143 FLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQ 1185
>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 103 bits (257), Expect(3) = 1e-27
Identities = 49/109 (44%), Positives = 73/109 (66%)
Frame = +1
Query: 115 RAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHEL 294
+A + K+ +AP+ + + ++ F+IY A G GCVLMQ G+VVAYASR+L++HEL
Sbjct: 831 QASFEEFKKRLTTAPVLVLPDLSKSFSIYCDASRLGLGCVLMQEGRVVAYASRQLRKHEL 890
Query: 295 NYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
NYPT +L++ AV++ L+I HYL K +IY DH+ LKY + Q +R
Sbjct: 891 NYPTHDLELAAVVHALKIWRHYLIGHKSDIYTDHKSLKYIFTQTDLNLR 939
Score = 38.9 bits (89), Expect(3) = 1e-27
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
K+A PMT L K+ KFVW++KC+ SF+
Sbjct: 809 KLAKPMTALLEKNAKFVWSDKCQASFE 835
Score = 26.9 bits (58), Expect(3) = 1e-27
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRFI+G SK
Sbjct: 793 FLGLAGYYRRFIEGFSK 809
>gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 104 bits (260), Expect(2) = 2e-27
Identities = 51/111 (45%), Positives = 74/111 (66%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+ F +Y A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 887 ECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPH 946
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL S + E+Y DH+ LKY + Q +R
Sbjct: 947 EGNYPTHDLELAAVVHALKIWQHYLISNRCEVYTDHKSLKYIFTQADLNLR 997
Score = 44.3 bits (103), Expect(2) = 2e-27
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 851 FLGLAGYYRRFIENISKIAKPMTQLLKKEEKFIWSAECNRSFE 893
>ref|XP_006596826.1| PREDICTED: uncharacterized protein LOC102662829 [Glycine max]
Length = 643
Score = 104 bits (260), Expect(2) = 2e-27
Identities = 48/105 (45%), Positives = 74/105 (70%)
Frame = +1
Query: 127 QIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPT 306
Q +K+ +AP+ + + F +Y A QG GCVLMQ G+VVAYASR+L+ HE+NYPT
Sbjct: 409 QELKRRLTTAPVLILPDPKRPFEVYCDASGQGLGCVLMQEGRVVAYASRQLRPHEVNYPT 468
Query: 307 CNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
+L++VAV++ L+I HYLY ++E+++DH+ LKY + Q + +R
Sbjct: 469 HDLELVAVVFALKIWRHYLYGTRFEVFSDHKSLKYLFDQKELNMR 513
Score = 44.3 bits (103), Expect(2) = 2e-27
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL +K + K+A P+ +LTRK+EKFVW EKC++SF+
Sbjct: 367 FLGLTGYYRKFIEGFSKLALPLNKLTRKNEKFVWNEKCDQSFQ 409
>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1502
Score = 105 bits (262), Expect(3) = 2e-27
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 915 LKACLTTAPVLSLPQGTGGYMVFCDASGVGLGCVLMQHGKVIAYASRQLKRHEHNYPIHD 974
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 975 LEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 1017
Score = 38.1 bits (87), Expect(3) = 2e-27
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 887 KIVAPLTKLTRKDTKFEWSDACENSFE 913
Score = 25.4 bits (54), Expect(3) = 2e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 871 FVGLAGYYRRFVKDFSK 887
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 105 bits (262), Expect(3) = 2e-27
Identities = 48/103 (46%), Positives = 69/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 823 LKACLTTAPVLSLPQGTGGYTMFCDASGVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHD 882
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ A+++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 883 LEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 925
Score = 38.1 bits (87), Expect(3) = 2e-27
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 795 KIVAPLTKLTRKDTKFEWSDACENSFE 821
Score = 25.4 bits (54), Expect(3) = 2e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 779 FVGLAGYYRRFVKDFSK 795
>gb|EOX94130.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1401
Score = 105 bits (262), Expect(3) = 2e-27
Identities = 47/103 (45%), Positives = 68/103 (66%)
Frame = +1
Query: 133 IKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPTCN 312
+K C +AP+ + T G+ ++ A G GCVLMQ+GKV+AYASR+LKRHE NYP +
Sbjct: 788 LKACLTTAPVLSLPQGTGGYTVFCDASRVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHD 847
Query: 313 LDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
L++ +++ L+I HYLY EIY DH+ LKY ++Q +R
Sbjct: 848 LEMATIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLR 890
Score = 38.1 bits (87), Expect(3) = 2e-27
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 50 KIADPMTQLTRKSEKFVWTEKCERSFK 130
KI P+T+LTRK KF W++ CE SF+
Sbjct: 760 KIVAPLTKLTRKDTKFEWSDACENSFE 786
Score = 25.4 bits (54), Expect(3) = 2e-27
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 3 F*GIVRYYRRFIKGLSK 53
F G+ YYRRF+K SK
Sbjct: 744 FVGLAGYYRRFVKDFSK 760
>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 104 bits (260), Expect(2) = 2e-27
Identities = 51/111 (45%), Positives = 74/111 (66%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+ F +Y A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 906 ECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPH 965
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL S + E+Y DH+ LKY + Q +R
Sbjct: 966 EGNYPTHDLELAAVVHALKIWRHYLISNRCEVYTDHKSLKYIFTQADLNLR 1016
Score = 43.9 bits (102), Expect(2) = 2e-27
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 870 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFE 912
>gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1238
Score = 103 bits (257), Expect(2) = 2e-27
Identities = 50/111 (45%), Positives = 73/111 (65%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+ F +Y A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 570 ECNRSFEELKRWLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRSH 629
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL + E+Y DH+ LKY + Q +R
Sbjct: 630 EGNYPTHDLELAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLR 680
Score = 45.1 bits (105), Expect(2) = 2e-27
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ Q KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 534 FLGLAGYYRRFIQNFSKIAKPMTQLLKKEEKFIWSAECNRSFE 576
>gb|AAL69429.1|AC098565_11 Putative polyprotein [Oryza sativa] gi|31430202|gb|AAP52148.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1788
Score = 104 bits (260), Expect(2) = 3e-27
Identities = 51/105 (48%), Positives = 72/105 (68%)
Frame = +1
Query: 127 QIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRHELNYPT 306
Q +K+ VS+P+ + +T + F +Y A QGFGCVLMQ+G VVAYASR+L+ HE NYPT
Sbjct: 1160 QTLKEKLVSSPVLILPDTRKDFMVYCDASRQGFGCVLMQDGHVVAYASRQLRPHEGNYPT 1219
Query: 307 CNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
+L++ AV++ L+I HYL + EIY DH+ LKY + Q +R
Sbjct: 1220 HDLELAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLR 1264
Score = 43.5 bits (101), Expect(2) = 3e-27
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKFVW+ +CE++F+
Sbjct: 1118 FLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQ 1160
>gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 104 bits (259), Expect(2) = 3e-27
Identities = 51/111 (45%), Positives = 74/111 (66%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+ F +Y A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 897 ECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPH 956
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL S + E+Y DH+ LKY + Q +R
Sbjct: 957 EGNYPTHDLELAAVVHALKIWRHYLISNRCEVYTDHKSLKYIFTQPDLNLR 1007
Score = 43.9 bits (102), Expect(2) = 3e-27
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 861 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFE 903
>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1548
Score = 104 bits (260), Expect(2) = 3e-27
Identities = 51/111 (45%), Positives = 74/111 (66%)
Frame = +1
Query: 109 EVRAELQIIKQCQVSAPIKKIRNTTEGFAIYSYA*EQGFGCVLMQNGKVVAYASRKLKRH 288
E + +K+ VSAP+ + + T+ F +Y A QG GCVLMQ+GKVV+YASR+L+ H
Sbjct: 880 ECNRSFEELKRRLVSAPVLILPDQTKDFQVYCDASRQGLGCVLMQDGKVVSYASRQLRPH 939
Query: 289 ELNYPTCNLDVVAVIYTLQI*HHYLYSWKYEIYNDHEGLKYFYRQYQATIR 441
E NYPT +L++ AV++ L+I HYL S + E+Y DH+ LKY + Q +R
Sbjct: 940 EGNYPTHDLELAAVVHALKIWRHYLISNRCEVYTDHKSLKYIFTQADLNLR 990
Score = 43.5 bits (101), Expect(2) = 3e-27
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 2 FLRHCSILQKVYQRAFKIADPMTQLTRKSEKFVWTEKCERSFK 130
FL ++ + KIA PMTQL +K EKF+W+ +C RSF+
Sbjct: 844 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSVECNRSFE 886