BLASTX nr result
ID: Rehmannia24_contig00015524
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00015524
(600 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 105 1e-20
emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera] 105 1e-20
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 102 1e-19
gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo... 102 1e-19
gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus pe... 100 5e-19
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 98 2e-18
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295... 98 2e-18
ref|XP_006363933.1| PREDICTED: transcription initiation factor T... 97 3e-18
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 96 8e-18
ref|XP_002510115.1| transcription initiation factor, putative [R... 96 1e-17
gb|EMJ09568.1| hypothetical protein PRUPE_ppa001078mg [Prunus pe... 91 2e-16
gb|ADD09583.1| transcription initiation factor [Trifolium repens] 89 7e-16
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 89 9e-16
gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus... 89 1e-15
gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus... 89 1e-15
gb|AFK42681.1| unknown [Lotus japonicus] 87 3e-15
ref|XP_003527732.1| PREDICTED: transcription initiation factor T... 87 5e-15
ref|XP_002302415.1| transcription initiation factor IID componen... 86 6e-15
ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Popu... 86 1e-14
ref|XP_006595987.1| PREDICTED: transcription initiation factor T... 85 1e-14
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 105 bits (261), Expect = 1e-20
Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKD +RK S+TS +N RENQEAEKR S ++P VRK GRN +VP RVAR+I
Sbjct: 788 GSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNI 847
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+I++LEREPQM KSTL+ R
Sbjct: 848 TVKDVISVLEREPQMLKSTLIYR 870
>emb|CAN80359.1| hypothetical protein VITISV_002028 [Vitis vinifera]
Length = 906
Score = 105 bits (261), Expect = 1e-20
Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKD +RK S+TS +N RENQEAEKR S ++P VRK GRN +VP RVAR+I
Sbjct: 812 GSQPGKDASRKLSSTSGRNARENQEAEKRGYSTVVSSPGGVRKFGRNNAIVPQTRVARNI 871
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+I++LEREPQM KSTL+ R
Sbjct: 872 TVKDVISVLEREPQMLKSTLIYR 894
>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
Length = 944
Score = 102 bits (253), Expect = 1e-19
Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQ GKDV R+P + S KNT++NQE+EKR P + + AS RK GRNQV+ P RVAR+I
Sbjct: 851 GSQAGKDVNRRPLSASVKNTKDNQESEKRGPLSPLASGAS-RKFGRNQVITPQTRVARTI 909
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKSTL+ R
Sbjct: 910 SVKDVIAVLEREPQMSKSTLIYR 932
>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
Length = 950
Score = 102 bits (253), Expect = 1e-19
Identities = 54/83 (65%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQ GKDV R+P + S KNT++NQE+EKR P + + AS RK GRNQV+ P RVAR+I
Sbjct: 857 GSQAGKDVNRRPLSASVKNTKDNQESEKRGPLSPLASGAS-RKFGRNQVITPQTRVARTI 915
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKSTL+ R
Sbjct: 916 SVKDVIAVLEREPQMSKSTLIYR 938
>gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus persica]
Length = 920
Score = 99.8 bits (247), Expect = 5e-19
Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKDV RKP++T+ + ++NQEAEKR + RK GRNQV+ P RVARSI
Sbjct: 826 GSQPGKDVNRKPTSTAGRIMKDNQEAEKRGGGTPVAAAGTFRKCGRNQVITPQTRVARSI 885
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMS+ST++ R
Sbjct: 886 SVKDVIAVLEREPQMSRSTMIYR 908
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 98.2 bits (243), Expect = 2e-18
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKD +RK S+TS +N RENQEAEKR S T VRK GRN +VP RVAR+I
Sbjct: 831 GSQPGKDASRKLSSTSGRNARENQEAEKRGYS---TVSCGVRKFGRNNAIVPQTRVARNI 887
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+I++LEREPQM KSTL+ R
Sbjct: 888 TVKDVISVLEREPQMLKSTLIYR 910
>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 97.8 bits (242), Expect = 2e-18
Identities = 50/81 (61%), Positives = 64/81 (79%), Gaps = 2/81 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKDV RKP++ + + + NQEAEKR +A + +VRK G+NQV+VP RVARSI
Sbjct: 864 GSQPGKDVNRKPTSAAGRIMKNNQEAEKRGGAAPVSVAGTVRKFGKNQVMVPQTRVARSI 923
Query: 426 SVKDIIAILEREPQMSKSTLL 364
SVKD+I++LEREPQMSKS L+
Sbjct: 924 SVKDVISVLEREPQMSKSPLI 944
>ref|XP_006363933.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 405
Score = 97.4 bits (241), Expect = 3e-18
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVV--PRVARSI 427
GSQPGKDV RK + +++R+ QEAEKR S+A +TP +VR+ GR Q ++ R+ARSI
Sbjct: 308 GSQPGKDVTRKNLSAPTRSSRDPQEAEKRIQSSAISTPGAVRRAGRTQGIITQTRIARSI 367
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+IA+LEREPQMSKSTL+ R
Sbjct: 368 TVKDVIAVLEREPQMSKSTLIYR 390
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 95.9 bits (237), Expect = 8e-18
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVV--PRVARSI 427
GSQPGKDV RK + +++++ QEAEKR S+A TP +VR+ GR Q ++ R+ARSI
Sbjct: 837 GSQPGKDVTRKNLSAPTRSSKDPQEAEKRIQSSAIATPGAVRRAGRTQGIITQTRIARSI 896
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+IA+LEREPQMSKSTL+ R
Sbjct: 897 TVKDVIAVLEREPQMSKSTLIYR 919
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 95.5 bits (236), Expect = 1e-17
Identities = 53/83 (63%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GS K+V RKP TS K+ ++NQE EKR P+AA T VRKVGRNQ P +VARSI
Sbjct: 834 GSYSAKEVTRKPQFTSGKSMKDNQEPEKRSPAAAST---GVRKVGRNQAFTPQSKVARSI 890
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA LEREPQMSKSTL+ R
Sbjct: 891 SVKDVIAALEREPQMSKSTLIYR 913
>gb|EMJ09568.1| hypothetical protein PRUPE_ppa001078mg [Prunus persica]
Length = 916
Score = 90.9 bits (224), Expect = 2e-16
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKDV KP++T+ + + +QEAEKR A +RK GRNQV++P R+AR+I
Sbjct: 827 GSQPGKDVNHKPTSTTGRIMKGSQEAEKRGGPAPVARAGPIRKSGRNQVIMPQTRMARTI 886
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA LEREPQMSKS L+ R
Sbjct: 887 SVKDMIAALEREPQMSKSMLIYR 909
>gb|ADD09583.1| transcription initiation factor [Trifolium repens]
Length = 934
Score = 89.4 bits (220), Expect = 7e-16
Identities = 48/83 (57%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVV--VPRVARSI 427
GSQP KDV+RK S +S +NTR+NQE E++ P++ + A+ RK G+NQ R+AR+I
Sbjct: 841 GSQPTKDVSRKSSPSSGRNTRDNQERERKGPTSLGNS-AAARKFGKNQSPGSQTRIARNI 899
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKS+LL R
Sbjct: 900 SVKDVIAVLEREPQMSKSSLLYR 922
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 89.0 bits (219), Expect = 9e-16
Identities = 47/83 (56%), Positives = 60/83 (72%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSI 427
GSQPGKDV RK +++R+ QEAEKR S+A P VR+ R Q ++ R+ARSI
Sbjct: 837 GSQPGKDVTRKNLPAPPRSSRDPQEAEKRIQSSAIAPPGVVRRAVRTQGIITQTRIARSI 896
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
+VKD+IA+LEREPQMSKSTL+ R
Sbjct: 897 TVKDVIAVLEREPQMSKSTLIYR 919
>gb|ESW32892.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
Length = 935
Score = 88.6 bits (218), Expect = 1e-15
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVPR--VARSI 427
GSQP KDV RK S+TS ++T++NQE EKR S F + RK+G++ + P VARSI
Sbjct: 840 GSQPAKDVNRKSSSTSERSTKDNQEGEKRG-STPFLASSVARKLGKSHALAPHTSVARSI 898
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKS L+ R
Sbjct: 899 SVKDVIAVLEREPQMSKSPLIHR 921
>gb|ESW32891.1| hypothetical protein PHAVU_001G026300g [Phaseolus vulgaris]
Length = 931
Score = 88.6 bits (218), Expect = 1e-15
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVPR--VARSI 427
GSQP KDV RK S+TS ++T++NQE EKR S F + RK+G++ + P VARSI
Sbjct: 836 GSQPAKDVNRKSSSTSERSTKDNQEGEKRG-STPFLASSVARKLGKSHALAPHTSVARSI 894
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKS L+ R
Sbjct: 895 SVKDVIAVLEREPQMSKSPLIHR 917
>gb|AFK42681.1| unknown [Lotus japonicus]
Length = 251
Score = 87.0 bits (214), Expect = 3e-15
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPS-ATSAKNTRENQEAEKRDPSAAFTTPASVRKVGR-NQVVVPRVARSI 427
GSQP KD++RK S +TS ++T++NQE K+ P++ T+ A+ RK GR N + PR+ARSI
Sbjct: 158 GSQPAKDLSRKSSPSTSGRSTKDNQERGKKGPTSTQTSGAA-RKFGRHNALAHPRIARSI 216
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD IA+LEREPQMSKS+LL R
Sbjct: 217 SVKDAIAVLEREPQMSKSSLLYR 239
>ref|XP_003527732.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
isoform X1 [Glycine max] gi|571458904|ref|XP_006581258.1|
PREDICTED: transcription initiation factor TFIID subunit
4b-like isoform X2 [Glycine max]
gi|571458906|ref|XP_006581259.1| PREDICTED: transcription
initiation factor TFIID subunit 4b-like isoform X3
[Glycine max]
Length = 933
Score = 86.7 bits (213), Expect = 5e-15
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVPR--VARSI 427
GSQP KDV++K S+TS ++T++NQ EK+ P T + RK GR+ P+ +ARSI
Sbjct: 844 GSQPAKDVSQKSSSTSGRSTKDNQAREKKGP-----TSGAGRKFGRSHATTPQNSIARSI 898
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKS+LL R
Sbjct: 899 SVKDVIAVLEREPQMSKSSLLYR 921
>ref|XP_002302415.1| transcription initiation factor IID component TAF4 family protein
[Populus trichocarpa] gi|222844141|gb|EEE81688.1|
transcription initiation factor IID component TAF4
family protein [Populus trichocarpa]
Length = 379
Score = 86.3 bits (212), Expect = 6e-15
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Frame = -1
Query: 597 SQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVVP--RVARSIS 424
SQP DV R P + S +N +EN EAEKR P+ + A VRK GRNQ +VP +V R+I+
Sbjct: 287 SQPVNDVNRNPQSPSGRNVKENLEAEKRSPAVPSASGA-VRKFGRNQAIVPQTKVVRTIT 345
Query: 423 VKDIIAILEREPQMSKSTLL 364
VKD++A+LEREPQMS+STL+
Sbjct: 346 VKDVMAVLEREPQMSRSTLI 365
>ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Populus trichocarpa]
gi|222861472|gb|EEE99014.1| hypothetical protein
POPTR_0014s01830g [Populus trichocarpa]
Length = 875
Score = 85.5 bits (210), Expect = 1e-14
Identities = 49/84 (58%), Positives = 62/84 (73%), Gaps = 5/84 (5%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRD---PSAAFTTPASVRKVGRNQVVVP--RVA 436
GSQP KDV RKP + S +N EN EAEKR PS+A + S RK GRNQ +VP +V
Sbjct: 780 GSQPVKDVNRKPLSPSGRNMMENLEAEKRSHVVPSSA--SGKSGRKCGRNQAIVPQTKVV 837
Query: 435 RSISVKDIIAILEREPQMSKSTLL 364
R+ISVKD++++LEREPQMS+STL+
Sbjct: 838 RTISVKDVMSVLEREPQMSRSTLI 861
>ref|XP_006595987.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Glycine max]
Length = 935
Score = 85.1 bits (209), Expect = 1e-14
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Frame = -1
Query: 600 GSQPGKDVARKPSATSAKNTRENQEAEKRDPSAAFTTPASVRKVGRNQVVV--PRVARSI 427
GSQP KDV RK +TS ++T++NQE EK+ S+ F + RK+GR+ + RVARSI
Sbjct: 843 GSQPAKDVNRKFLSTSGRSTKDNQEGEKKG-SSTFIASSVARKLGRSHAMALQTRVARSI 901
Query: 426 SVKDIIAILEREPQMSKSTLLIR 358
SVKD+IA+LEREPQMSKS L+ R
Sbjct: 902 SVKDVIAVLEREPQMSKSPLMHR 924