BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00014138
         (633 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625...    82   4e-30
ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein A...    77   3e-25
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...    72   1e-23
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    74   5e-21
ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616...    65   2e-19
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    56   6e-16
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    63   2e-15
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    63   2e-15
ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein A...    67   5e-15
ref|XP_006480206.1| PREDICTED: uncharacterized protein LOC102628...    82   2e-14
gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    58   1e-12
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    79   1e-12
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    67   1e-12
gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus pe...    74   5e-11
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A...    50   2e-10
ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein A...    50   2e-10
ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein A...    50   2e-10
ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608...    71   2e-10
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    62   2e-10
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    51   3e-10

>ref|XP_006467327.1| PREDICTED: uncharacterized protein LOC102625297 [Citrus sinensis]
          Length = 412

 Score = 81.6 bits (200), Expect(2) = 4e-30
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQ--VELADWRIKDCDGAVTWSKPKSGAF 112
           NRN+ VW     S   ++N+AG ++ QW+ A+Q   ++ D   +   GA+ W +PK G  
Sbjct: 278 NRNNKVWNNTTSSVCQILNSAGQFLYQWQAAKQQVFDVNDDTHRLVHGALCWEQPKFGWV 337

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D  +F   G+IG  CV+R+S+G FVAA+
Sbjct: 338 KCNVDAAVFESQGKIGIGCVIRNSQGGFVAAR 369



 Score = 76.3 bits (186), Expect(2) = 4e-30
 Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W  LW+ KVP K K  +WRA  N LPT + L  KRV +   CSVCN   E+V H  +   
Sbjct: 170 WRKLWNSKVPNKVKNFIWRAAHNVLPTALNLISKRVDVPAMCSVCNAYEETVLHSLVACS 229

Query: 434 FARHCWALASINF--SINGATDFLSCLRTNWSQFVLFDKLMVVMVIC 300
           FA+ CW  +S+ F    +   D+L+ + T  S+    D+    M+IC
Sbjct: 230 FAKSCWTSSSVGFVGYCSNFLDWLAHVFTRCSK----DECNTAMMIC 272


>ref|XP_006480463.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 459

 Score = 76.6 bits (187), Expect(2) = 3e-25
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W  +W L+VP K +  VWRA  N LPT V L+ K V +N  C V N + E+V HL +  P
Sbjct: 170 WRKIWKLEVPAKVRNFVWRAASNVLPTAVNLRSKHVSLNDLCLVGNFDKETVLHLLVDCP 229

Query: 434 FARHCWALASINF--SINGATDFLSCLRTNWSQFVLFDKLMVVMVICAMWK 288
           FAR CW  + + F    +   D+L  L  N +     ++  + +++C  WK
Sbjct: 230 FARSCWIKSKVGFFGIYSSFKDWLQALFRNCTN----EQCWIAVMVC--WK 274



 Score = 65.1 bits (157), Expect(2) = 3e-25
 Identities = 34/89 (38%), Positives = 43/89 (48%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFKC 106
           NRN+LVW GK  +   ++N AG                       GAV WS P+ G  KC
Sbjct: 278 NRNNLVWQGKCDTTKQIVNAAGV----------------------GAVAWSPPRVGWLKC 315

Query: 105 NMDGVIFHQTGRIGFACVVRDSRGMFVAA 19
           N+D  +F   GR+G   V+RD  G FVAA
Sbjct: 316 NIDATVFANEGRVGLGSVIRDESGKFVAA 344


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score = 71.6 bits (174), Expect(2) = 1e-23
 Identities = 35/109 (32%), Positives = 57/109 (52%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W  +W LKVP K K  +W A +N LPT   L++ +V +   C +CN   E V H  +   
Sbjct: 196 WQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPSVCPICNAYDEIVAHCLVNCS 255

Query: 434 FARHCWALASINFSINGATDFLSCLRTNWSQFVLFDKLMVVMVICAMWK 288
           FA+ CW L+ I + + G  +F+  L   +S++   D  +  M   ++W+
Sbjct: 256 FAKSCWLLSPIGY-VGGCENFMDWLEGIFSRYSSDDCDLAAMTCWSLWE 303



 Score = 64.3 bits (155), Expect(2) = 1e-23
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
 Frame = -1

Query: 288 KNRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWR-IKDCDGAVTWSKPKSGAF 112
           +N+N  VW  +     SV+N AG  + QW+  +++++ D   +    GAV W +P    F
Sbjct: 303 ENKNAKVWKNRKGRLSSVLNLAGQVLFQWKSVRKLQVFDNNSVSSSHGAVCWQRPCVWWF 362

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D   F  +G I +  V+++S G FV A+
Sbjct: 363 KCNVDATTFLSSGTIMYGAVIQNSEGEFVTAR 394


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 73.6 bits (179), Expect(2) = 5e-21
 Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
 Frame = -2

Query: 623  DFQWTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFI 444
            D  W  LW+LKVPPK K  +WR+  N LPTRV L+ + V     C++C NE E   HLF 
Sbjct: 1414 DGNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFF 1473

Query: 443  LFPFARHCWALASINFSINGATDF-LSCLRTNWSQFVLFDKLMVVMVICAMW 291
                +R CW    +   +       LS   T +      D    V+  C MW
Sbjct: 1474 YCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMW 1525



 Score = 53.9 bits (128), Expect(2) = 5e-21
 Identities = 26/91 (28%), Positives = 41/91 (45%)
 Frame = -1

Query: 288  KNRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFK 109
            K RND +W  +  +  +V +   + +  W+ AQ +               W KP  G FK
Sbjct: 1529 KQRNDCIWRNEVMTTAAVRDRGLNLLTGWQNAQDI---------------WRKPDEGHFK 1573

Query: 108  CNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
            CN+D   F ++ R+G    +RD  G  V A+
Sbjct: 1574 CNVDAAFFKESNRVGIGICIRDDSGRLVKAR 1604


>ref|XP_006469773.1| PREDICTED: uncharacterized protein LOC102616843 [Citrus sinensis]
          Length = 977

 Score = 64.7 bits (156), Expect(2) = 2e-19
 Identities = 31/73 (42%), Positives = 38/73 (52%)
 Frame = -2

Query: 614  WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
            W  LW+L V  K K  VWRA  N LPT V L  KRV I   C+VC    E+  H  +   
Sbjct: 799  WRKLWNLNVAHKVKNFVWRAATNVLPTAVNLISKRVNIPPTCAVCLASDETALHSLVECN 858

Query: 434  FARHCWALASINF 396
             A+ CW  +S+ F
Sbjct: 859  VAKACWISSSVGF 871



 Score = 57.4 bits (137), Expect(2) = 2e-19
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = -1

Query: 285  NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVEL-ADWRI-KDCDGAVTWSKPKSGAF 112
            NRND VW  K  S   V+N+AG  + QW++A++ +  AD  + K   GA+ W +PK G  
Sbjct: 907  NRNDKVWNNKTGSVNQVLNSAGQLLYQWQVAKKQQFYADADVHKLVYGAICWERPKFGWV 966

Query: 111  KCNMDGVIF 85
            KCN+D  +F
Sbjct: 967  KCNVDAAMF 975


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 55.8 bits (133), Expect(2) = 6e-16
 Identities = 29/108 (26%), Positives = 48/108 (44%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W  LW L +  K K  +WRA  N LP R  L  ++V  +  C  C ++ E++ H+ +L  
Sbjct: 184 WRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCD 243

Query: 434 FARHCWALASINFSINGATDFLSCLRTNWSQFVLFDKLMVVMVICAMW 291
                W   ++   ++  ++ L   R   S F  FD  +V   +   W
Sbjct: 244 VTTQSWKYVNLYQFLSQVSNLLEGAR---SVFEHFDDSIVASFVVLWW 288



 Score = 54.3 bits (129), Expect(2) = 6e-16
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKD---CDGAVTWSKPKSGA 115
           N ND+VW GK  S  +V + A S++ QW  A++  L D+         G   W KP +G 
Sbjct: 293 NMNDVVWNGKKLSWRAVASRASSFLFQWGKARK--LTDYHQLGRHFAGGDCLWQKPATGK 350

Query: 114 FKCNMDGVIFHQTGRIGFACVVRDSRGMFV 25
           +K N+D     + G+ G + V+RD+ G+++
Sbjct: 351 YKLNVDASSSAERGKSGASFVLRDNAGIWI 380


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 62.8 bits (151), Expect(2) = 2e-15
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W+++W LKVPPK K  +WR     LPTR  L+ K V     C  C+  +E V HLF +  
Sbjct: 261 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 320

Query: 434 FARHCWALASINFSINGAT---DFLSCLRTNWSQFVLFDKLMVVMVICAMWKK 285
           F    W L+ +   I  A    D  S +  +  Q    ++  + + + ++WK+
Sbjct: 321 FDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKR 373



 Score = 45.4 bits (106), Expect(2) = 2e-15
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 31/122 (25%)
 Frame = -1

Query: 288 KNRNDLVWTGKGRSAISVINTAGSYVLQWEL----------------------AQQ--VE 181
           K RN  VW  K  S    ++ A   + +W+L                      AQQ  V 
Sbjct: 372 KRRNLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVH 431

Query: 180 LADWRIKDCDGA-------VTWSKPKSGAFKCNMDGVIFHQTGRIGFACVVRDSRGMFVA 22
           L    +     A       ++W +P  G FKCN+D        RIG    VRD  G +V 
Sbjct: 432 LQQSHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVL 491

Query: 21  AK 16
           AK
Sbjct: 492 AK 493


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 62.8 bits (151), Expect(2) = 2e-15
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W+++W LKVPPK K  +WR     LPTR  L+ K V     C  C+  +E V HLF +  
Sbjct: 168 WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 227

Query: 434 FARHCWALASINFSINGAT---DFLSCLRTNWSQFVLFDKLMVVMVICAMWKK 285
           F    W L+ +   I  A    D  S +  +  Q    ++  + + + ++WK+
Sbjct: 228 FDVQVWQLSDLWSEIQQAVIHFDTASAVIFDLLQRFTLEQSQIFVTMWSLWKR 280



 Score = 45.4 bits (106), Expect(2) = 2e-15
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 31/122 (25%)
 Frame = -1

Query: 288 KNRNDLVWTGKGRSAISVINTAGSYVLQWEL----------------------AQQ--VE 181
           K RN  VW  K  S    ++ A   + +W+L                      AQQ  V 
Sbjct: 279 KRRNLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVH 338

Query: 180 LADWRIKDCDGA-------VTWSKPKSGAFKCNMDGVIFHQTGRIGFACVVRDSRGMFVA 22
           L    +     A       ++W +P  G FKCN+D        RIG    VRD  G +V 
Sbjct: 339 LQQSHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVL 398

Query: 21  AK 16
           AK
Sbjct: 399 AK 400


>ref|XP_006577722.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 249

 Score = 67.0 bits (162), Expect(2) = 5e-15
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
 Frame = -2

Query: 617 QWTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILF 438
           +W +LW L+VP K K  +WRA   CLPTR+ L+ K V   G C +C N  E+ +H  +  
Sbjct: 15  RWKDLWKLQVPNKVKVFLWRAVRGCLPTRLRLQTKGVVCTGICPLCLNNLENEWHCLVAC 74

Query: 437 PFARHCWALAS----INFSINGATDFLSCLRTNWSQFVLFDKLMVVMVICAMW 291
           P    CW LA     I   ++ A  F   +   +       K  +  V+  MW
Sbjct: 75  PSNLVCWKLAGFWNVIRVQVDSADSFDDLI---FRLLASISKAKISQVVMLMW 124



 Score = 40.0 bits (92), Expect(2) = 5e-15
 Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
 Frame = -1

Query: 279 NDLVWTGKGRSAISVINTAGSYVLQWELA--QQVELADWRIKDCDGAVTWSKPKSGAFKC 106
           N  VW    RS    +  A + +  W     ++V +   +I        W KP     KC
Sbjct: 131 NGKVWEDADRSPSVTVRRATNCLTDWGKCHRRRVSVPQRQISPPQ----WVKPPLVFAKC 186

Query: 105 NMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           N+D  +F    R G    +RDS G F+ AK
Sbjct: 187 NLDAAVFGNQRRFGLGMCLRDSLGRFIIAK 216


>ref|XP_006480206.1| PREDICTED: uncharacterized protein LOC102628543 [Citrus sinensis]
          Length = 163

 Score = 81.6 bits (200), Expect(2) = 2e-14
 Identities = 37/92 (40%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQ--VELADWRIKDCDGAVTWSKPKSGAF 112
           NRN+  W     S   ++N+AG ++ QW+ A+Q   ++ D   K   GA+ W KPK G  
Sbjct: 54  NRNNKAWNNTASSVCQILNSAGQFLYQWQAAKQQVFDINDDTHKLVHGALCWEKPKFGWV 113

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D  +F   G+IG  CV+R+S+G F+AA+
Sbjct: 114 KCNVDAAVFTPQGKIGIGCVIRNSQGGFLAAR 145



 Score = 23.9 bits (50), Expect(2) = 2e-14
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 434 FARHCWALASINFSINGAT--DFLSCLRTNWSQFVLFDKLMVVMVIC 300
           FA+ CW  +S+ F    +T  D+L+ + T  S+    D+  + M+IC
Sbjct: 6   FAKSCWISSSVGFVGYCSTFLDWLAHVFTRCSK----DECNIAMMIC 48


>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 355

 Score = 57.8 bits (138), Expect(2) = 1e-12
 Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W N+W+L +P + +  +WR   NCLPTRV L  + +     C +  N  E   HLF +  
Sbjct: 115 WMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARGIQCEESCVMFENFAECHTHLFFVCA 174

Query: 434 FARHCWALASINFSING----ATDFLSCLRTNWSQFVLFDKLMVVMVICAMWK 288
            A  CW    ++  ++     A +F + L     +     +    M++ ++WK
Sbjct: 175 KAMDCWKNIGLHVVLSELLPLANNFTTLLFDFMHRLCSQQQQAAGMLLWSLWK 227



 Score = 41.6 bits (96), Expect(2) = 1e-12
 Identities = 24/91 (26%), Positives = 38/91 (41%)
 Frame = -1

Query: 288 KNRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFK 109
           K+RN  +W     +    I+ A   + +W   Q    A  +  + +  ++W KP  G  K
Sbjct: 227 KSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQS---AKTQPINPNHHISWVKPTGGMIK 283

Query: 108 CNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           CNMD  IF      G+    R+S    +  K
Sbjct: 284 CNMDAAIFQNNVAAGYGICCRNSEDELLLGK 314


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W  LW L+VP K K  +WRA  + LPT   L +K V +   C  C+  +ES+ H+ +  P
Sbjct: 123 WNQLWRLEVPSKVKHFMWRALTDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCP 182

Query: 434 FARHCWALASINFSINGATDFLSCLRTNWSQFVLFDKLMVVMVICAMWK-KIETTWYGLV 258
           FAR CW  +SI F  +G ++ L  L   ++++ L    + VM+  ++W+ + +  W G  
Sbjct: 183 FARTCWMTSSIGFFGDG-SNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVWRGKT 241

Query: 257 RVVQR 243
             VQ+
Sbjct: 242 SGVQQ 246



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
 Frame = -1

Query: 288 KNRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCD-GAVTWSKPKSGAF 112
           +NRND+VW GK      ++N+AG ++ QW+L ++ +    +      GA+ W  P +G  
Sbjct: 230 QNRNDMVWRGKTSGVQQLLNSAGHFLFQWQLVRKQQFLFSQPSPIGHGAICWEPPVAGRL 289

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D  +F   G IGF  V+RDS   F+AA+
Sbjct: 290 KCNVDVALFAFRGYIGFGNVIRDSNCAFMAAR 321


>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 67.0 bits (162), Expect(2) = 1e-12
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGA-----VTWSKPKS 121
           +RN++VW  K +    +++ A +Y+ +W +AQQ         D  G        W KPK+
Sbjct: 83  HRNEVVWYSKRKQPTQIVDGAVTYLHKWLIAQQTNPPS---PDNSGLFHHNLAKWKKPKT 139

Query: 120 GAFKCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           G  KCN+D  IF+Q G IG  CV+R++ G F+ A+
Sbjct: 140 GWPKCNIDAAIFNQQGMIGADCVLRNTEGAFIGAR 174



 Score = 32.0 bits (71), Expect(2) = 1e-12
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = -2

Query: 515 KRVGINGDCSVCNNETESVFHLFILFPFARHCWALASINFSINGATDFLSCLRTNWSQFV 336
           KRV +   C +C+   ES+++  I   F +  W ++ +    N        L+  +++F 
Sbjct: 7   KRVNVQDLCPLCSKPGESIYYALIDCSFVKEVWVISVLISRGNRNGSICDWLQEMFTKFE 66

Query: 335 LFDKLMVVMVICAMW-KKIETTWY 267
                 + +++  +W  + E  WY
Sbjct: 67  KSTWGCIAVLVWNLWIHRNEVVWY 90


>gb|EMJ07893.1| hypothetical protein PRUPE_ppa024911mg [Prunus persica]
          Length = 378

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W ++W+L+VPPK +  +WR   N L  R  L+++RV +  DC +C N  ++  HLF    
Sbjct: 209 WKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTEVHLFFRCE 268

Query: 434 FARHCWALASINFSING--ATDFLSCLRTNWSQFVLFDKLMVVMVICA--MWK 288
            AR  W  +  +  ++G    DFLSC      +F   +K+  ++ I A  +W+
Sbjct: 269 IARLFWFASPSHLDVHGVEGEDFLSCWECLLQKFAQVEKMDEILQIVAFGLWR 321


>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Citrus sinensis]
          Length = 968

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W ++W L++P K K  +WRA  + LPT   L ++R+     C  C +  E++FH      
Sbjct: 653 WNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCK 712

Query: 434 FARHCWALASINFSING--ATDFLSCLRTNWSQFVLFDKLMVVMVICAMW 291
            +R  W L +    +      D LS L     +    +  ++V V  ++W
Sbjct: 713 ASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIW 762



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = -1

Query: 285  NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFKC 106
            +RN  ++  K       +  A + V  ++  Q  +L  +  +D      W  P +G FK 
Sbjct: 764  SRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKV 823

Query: 105  NMDGVIFHQTGRIGFACVVRDSRGMFVAA 19
            N+D  I  +  R+G   V+R+S G F+ A
Sbjct: 824  NVDAAIKLENQRVGLGIVIRNSEGKFITA 852


>ref|XP_006464882.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 769

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W ++W L++P K K  +WRA  + LPT   L ++R+     C  C +  E++FH      
Sbjct: 450 WNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCK 509

Query: 434 FARHCWALASINFSING--ATDFLSCLRTNWSQFVLFDKLMVVMVICAMW 291
            +R  W L +    +      D LS L     +    +  ++V V  ++W
Sbjct: 510 ASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIW 559



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFKC 106
           +RN  ++  K       +  A + V  ++  Q  +L  +  +D      W  P +G FK 
Sbjct: 561 SRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSNQDLVSHKHWKCPPAGWFKV 620

Query: 105 NMDGVIFHQTGRIGFACVVRDSRGMFVAA 19
           N+D  I  +  R+G   V+R+S G F+ A
Sbjct: 621 NVDAAIKLENQRVGLGIVIRNSEGKFITA 649


>ref|XP_006493122.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Citrus sinensis]
          Length = 765

 Score = 50.4 bits (119), Expect(2) = 2e-10
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 2/110 (1%)
 Frame = -2

Query: 614 WTNLWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFP 435
           W ++W L++P K K  +WRA  + LPT   L ++R+     C  C +  E++FH      
Sbjct: 450 WNSIWYLQIPEKVKIFMWRATNDLLPTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCK 509

Query: 434 FARHCWALASINFSING--ATDFLSCLRTNWSQFVLFDKLMVVMVICAMW 291
            +R  W L +    +      D LS L     +    +  ++V V  ++W
Sbjct: 510 ASRKIWKLTTFEEEVKALKCKDVLSLLLALADRRSKTEMELIVAVCWSIW 559



 Score = 41.2 bits (95), Expect(2) = 2e-10
 Identities = 24/89 (26%), Positives = 41/89 (46%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDCDGAVTWSKPKSGAFKC 106
           +RN  ++  K       +  A + V  ++  Q  +L  +  +D      W  P +G FK 
Sbjct: 561 SRNLFIFQNKKEDFQLSVAGAEAIVQSYKRIQMPQLQAFSDQDLVSHKHWKCPPAGWFKV 620

Query: 105 NMDGVIFHQTGRIGFACVVRDSRGMFVAA 19
           N+D  I  +  R+G   V+R+S G F+ A
Sbjct: 621 NVDAAIKLENQRVGLGIVIRNSEGKFITA 649


>ref|XP_006489961.1| PREDICTED: uncharacterized protein LOC102608276 [Citrus sinensis]
          Length = 190

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWE-LAQQVELADW-RIKDCDGAVTWSKPKSGAF 112
           +RND VW  +      ++N+AG  + QW+ L +Q    D        GAV W +P  G  
Sbjct: 32  HRNDKVWNNRSGRVYQILNSAGHLLYQWQSLRKQAMFTDVDESSSVHGAVCWKRPHVGWV 91

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D  +F     +G  CVVR+S G+F+ AK
Sbjct: 92  KCNVDAAVFSSQAMVGLGCVVRNSEGIFLTAK 123


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 62.4 bits (150), Expect(2) = 2e-10
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -1

Query: 285 NRNDLVWTGKGRSAISVINTAGSYVLQWELAQQVELADWRIKDC--DGAVTWSKPKSGAF 112
           +RN++VW  K +    +++ A +Y+ +W +AQQ         +        W KPKSG+ 
Sbjct: 151 HRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAKWKKPKSGSL 210

Query: 111 KCNMDGVIFHQTGRIGFACVVRDSRGMFVAAK 16
           KCN+D   F+Q G IG   V+R++ G  + A+
Sbjct: 211 KCNVDASTFNQQGMIGAGYVLRNTEGALLGAR 242



 Score = 28.9 bits (63), Expect(2) = 2e-10
 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = -2

Query: 491 CSVCNNETESVFHLFILFPFARHCWALASI--NFSINGATDFLSCLRTNWSQ--FVLFDK 324
           C +C+N  ES++H  I   F +  W ++ +    + NG+         +W Q  F  FDK
Sbjct: 83  CPLCSNPGESIYHALIDCSFVKEVWVISVLVSRGNRNGSI-------CDWLQEIFTKFDK 135

Query: 323 LMVVMVICAMW 291
                +   +W
Sbjct: 136 STWHCIAAIVW 146


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 50.8 bits (120), Expect(2) = 3e-10
 Identities = 22/90 (24%), Positives = 47/90 (52%)
 Frame = -2

Query: 605  LWSLKVPPKAKRTVWRAGLNCLPTRVCLKQKRVGINGDCSVCNNETESVFHLFILFPFAR 426
            +W+L   PK +  +W+A    +P    L+ + +  +  C +C+ E E++ H+    P AR
Sbjct: 1045 IWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLAR 1104

Query: 425  HCWALASINFSINGATDFLSCLRTNWSQFV 336
              WA+  ++   +  ++F + + TN S+ +
Sbjct: 1105 QVWAITHLS---SAGSEFSNSVYTNMSRLI 1131



 Score = 40.0 bits (92), Expect(2) = 3e-10
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
 Frame = -1

Query: 327  QANGCNGYLRYVE--------KNRNDLVWTGKGRSAISVINTAGSYVLQWELAQ-QVELA 175
            Q N    +LR+V         KNRN L++ GKG    ++++ A     +W  AQ  ++  
Sbjct: 1135 QQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQND 1194

Query: 174  DWRIKDCDGAVTWSKPKSGAFKCNMDGVIFHQTGRIGFACVVRDSRGMFVAAKR 13
            +  +K       W  P  G  KCN+      Q    G + VVRDS+G  +   R
Sbjct: 1195 EKHLK----ITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSR 1244