BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00014094
         (715 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus pe...    80   5e-13
ref|XP_006381622.1| pentatricopeptide repeat-containing family p...    80   9e-13
ref|XP_002326124.1| predicted protein [Populus trichocarpa]            80   9e-13
ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containi...    76   1e-11
gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, put...    76   1e-11
ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citr...    75   3e-11
ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containi...    74   6e-11
ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containi...    74   6e-11
ref|XP_002512275.1| pentatricopeptide repeat-containing protein,...    74   6e-11
ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containi...    72   2e-10
ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containi...    70   5e-10
gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]      70   7e-10
ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containi...    70   7e-10
gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]        69   2e-09
dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]                       68   3e-09
ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutr...    67   8e-09
ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containi...    66   1e-08
ref|NP_178657.1| pentatricopeptide repeat-containing protein [Ar...    64   4e-08
ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containi...    64   5e-08

>gb|EMJ06024.1| hypothetical protein PRUPE_ppa004064mg [Prunus persica]
          Length = 532

 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 39/75 (52%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAI  + KML++GCAPDNIT+ SL+SCL KAGM  EA+ I++ A   ++ G+S   
Sbjct: 458 GRMSEAISNFKKMLAIGCAPDNITVDSLISCLMKAGMPNEAHHIKKIACEDLNLGMSPSR 517

Query: 182 RTTSVRNNMTVTVAV 226
           R   +R N  +TVAV
Sbjct: 518 RADHLRANAKITVAV 532


>ref|XP_006381622.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550336330|gb|ERP59419.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 511

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAI ++N+ML+  CAPDNIT++SL+SCL KAGM  EA  I + AL   + GLSS E
Sbjct: 437 GRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFE 496

Query: 182 RTTSVRNNMTVTVAV 226
           +   +R N  + VAV
Sbjct: 497 KAIPLRTNTDIPVAV 511


>ref|XP_002326124.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAI ++N+ML+  CAPDNIT++SL+SCL KAGM  EA  I + AL   + GLSS E
Sbjct: 438 GRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFE 497

Query: 182 RTTSVRNNMTVTVAV 226
           +   +R N  + VAV
Sbjct: 498 KAIPLRTNTDIPVAV 512


>ref|XP_006474728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Citrus sinensis]
           gi|568841566|ref|XP_006474729.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Citrus sinensis]
          Length = 595

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 37/74 (50%), Positives = 52/74 (70%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRMVEAI ++NKML++GCAPD+IT++SL+SCL K GM  EA  I Q+A   ++  L S +
Sbjct: 521 GRMVEAISIFNKMLTIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDLNLQLPSWK 580

Query: 182 RTTSVRNNMTVTVA 223
           +   +R N  + VA
Sbjct: 581 KAVPLRTNTDIPVA 594


>gb|EOY30252.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 592

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 39/74 (52%), Positives = 50/74 (67%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAI ++NKMLSVGC PD++T++SL+SCL KAGM  EA+ I + A   M  G S  E
Sbjct: 518 GRMFEAISIFNKMLSVGCTPDDVTVNSLISCLLKAGMPSEASRITKMASEDMKLGSSLLE 577

Query: 182 RTTSVRNNMTVTVA 223
             + +R N  V VA
Sbjct: 578 NNSPLRINRGVPVA 591


>ref|XP_006452806.1| hypothetical protein CICLE_v10007804mg [Citrus clementina]
           gi|557556032|gb|ESR66046.1| hypothetical protein
           CICLE_v10007804mg [Citrus clementina]
          Length = 595

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 37/74 (50%), Positives = 50/74 (67%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRMVEAI ++NKML +GCAPD+IT++SL+SCL K GM  EA  I Q+A    +  L S +
Sbjct: 521 GRMVEAISIFNKMLRIGCAPDDITVNSLISCLLKGGMPNEAFRIMQRASEDQNLQLPSWK 580

Query: 182 RTTSVRNNMTVTVA 223
           +   +R N  + VA
Sbjct: 581 KAVPLRTNTDIPVA 594


>ref|XP_004301429.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Fragaria vesca subsp. vesca]
          Length = 583

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 40/75 (53%), Positives = 50/75 (66%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAIG ++KMLS+GCAPD ITI SL+SCL KAGM  EA  I++ A   ++ G  S  
Sbjct: 510 GRMSEAIGNFSKMLSIGCAPDKITIDSLISCLSKAGMPSEAGRIKKIAYEDLNMGAPSMG 569

Query: 182 RTTSVRNNMTVTVAV 226
           R   +R N  + VAV
Sbjct: 570 RPPHLRAN-EIPVAV 583


>ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 37/74 (50%), Positives = 49/74 (66%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GR+ EAI ++N+ML  GCAPD+IT++SL+SCL KAGM  EA  I Q A    + GL S +
Sbjct: 497 GRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAYRIMQIASEDFNLGLKSLK 556

Query: 182 RTTSVRNNMTVTVA 223
           R   +R N  + VA
Sbjct: 557 RNVPLRTNTDIPVA 570


>ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548236|gb|EEF49727.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 532

 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 38/74 (51%), Positives = 50/74 (67%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRMVEA+ ++ KML++GCAPDNITISSLV+CL KAG   EA  I Q A   ++   SS  
Sbjct: 458 GRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFHIVQTASEDLNLSFSSLR 517

Query: 182 RTTSVRNNMTVTVA 223
           +T  +R    ++VA
Sbjct: 518 KTFPMRVKTDISVA 531


>ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSS 175
           GRMVEAI  + KM+ + C PD ITI+SL+SCL KAGM  EA++I+Q AL  ++ GLSS
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSS 531


>ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSS 175
           GRMVEAI  + KM+ + C PD ITI+SL+SCL KAGM  EA++I+Q AL  ++ GLSS
Sbjct: 474 GRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPNEASQIKQAALQKLNLGLSS 531


>ref|XP_006351831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Solanum tuberosum]
           gi|565370447|ref|XP_006351832.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Solanum tuberosum]
          Length = 550

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 33/75 (44%), Positives = 51/75 (68%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM+EA+ +++KMLS+GC PD+IT+S L SCL KAGM  EA ++       ++  LSS +
Sbjct: 476 GRMLEAMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKVRLTPSKDLNPDLSSSK 535

Query: 182 RTTSVRNNMTVTVAV 226
           ++   R ++ + VAV
Sbjct: 536 QSVPFRTSLDIPVAV 550


>gb|EXB38956.1| hypothetical protein L484_027391 [Morus notabilis]
          Length = 570

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 33/58 (56%), Positives = 45/58 (77%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSS 175
           GRMV+AIG++ KML+VGCAPD IT+  L+SCL KAGM  EA  I++  + S++ G+SS
Sbjct: 497 GRMVDAIGVFYKMLAVGCAPDKITVHCLMSCLLKAGMPNEAFHIKETVMKSLNVGMSS 554


>ref|XP_006577946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X1 [Glycine max]
           gi|571448762|ref|XP_006577947.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Glycine max]
           gi|571448764|ref|XP_006577948.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X3 [Glycine max]
           gi|571448766|ref|XP_006577949.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g06000-like isoform X4 [Glycine max]
          Length = 510

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 34/75 (45%), Positives = 53/75 (70%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAIG+++KML+VGCAPD IT+++L SCL KAGM  EA  +++    ++  G++S +
Sbjct: 436 GRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQNLTLGITSSK 495

Query: 182 RTTSVRNNMTVTVAV 226
           ++     N ++ VAV
Sbjct: 496 KSYHETTNESIPVAV 510


>gb|EPS73770.1| hypothetical protein M569_00985 [Genlisea aurea]
          Length = 301

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQ 139
           GRMVEAI +Y KM+ VGC PD+IT S LVSCLRKAGMA EAN IE+
Sbjct: 250 GRMVEAIRIYEKMVYVGCRPDDITWSCLVSCLRKAGMAREANRIER 295


>dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
          Length = 536

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 31/64 (48%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EA+ +++KM+++GC+PD IT+SSL+SCL KAGMA EA  + Q A     + +  PE
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPPE 525

Query: 182 RTTS 193
             T+
Sbjct: 526 TKTA 529


>ref|XP_006396122.1| hypothetical protein EUTSA_v10002477mg [Eutrema salsugineum]
           gi|557096393|gb|ESQ36901.1| hypothetical protein
           EUTSA_v10002477mg [Eutrema salsugineum]
          Length = 535

 Score = 66.6 bits (161), Expect = 8e-09
 Identities = 31/61 (50%), Positives = 45/61 (73%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAI +++KM+++GC+PD IT+SSL SCL KAGMA EA ++ Q A+    + ++  E
Sbjct: 465 GRMCEAISIFHKMVAIGCSPDKITVSSLSSCLLKAGMAKEAYQLNQFAVKGQSNDVAPLE 524

Query: 182 R 184
           R
Sbjct: 525 R 525


>ref|XP_004230611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Solanum lycopersicum]
          Length = 550

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 33/75 (44%), Positives = 48/75 (64%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM+EA+ +++KMLS+GC PD+ITIS L SCL KAGM  EA ++       ++  LS  +
Sbjct: 476 GRMLEALAIFDKMLSLGCVPDDITISCLTSCLLKAGMVKEAYKVRLIPSKDLNPDLSPSK 535

Query: 182 RTTSVRNNMTVTVAV 226
                R ++ + VAV
Sbjct: 536 LFIPFRTSLDIPVAV 550


>ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|42570711|ref|NP_973429.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g06000 gi|4006835|gb|AAC95177.1| hypothetical protein
           [Arabidopsis thaliana] gi|110736272|dbj|BAF00106.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|330250896|gb|AEC05990.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|330250897|gb|AEC05991.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 536

 Score = 64.3 bits (155), Expect = 4e-08
 Identities = 30/64 (46%), Positives = 44/64 (68%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EA+ +++KM+++GC+PD IT+SSL+SCL KAGMA EA  + Q A     + +   E
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKGQSNNVVPLE 525

Query: 182 RTTS 193
             T+
Sbjct: 526 TKTA 529


>ref|XP_006581144.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like isoform X2 [Glycine max]
          Length = 581

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 30/62 (48%), Positives = 45/62 (72%)
 Frame = +2

Query: 2   GRMVEAIGMYNKMLSVGCAPDNITISSLVSCLRKAGMALEANEIEQKALNSMHSGLSSPE 181
           GRM EAIG ++KML+VGCAPD IT+++L SCL KAGM  EA  +++    ++  G +S +
Sbjct: 437 GRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNLTLGTTSSK 496

Query: 182 RT 187
           ++
Sbjct: 497 KS 498