BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013728
         (1104 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-...   459   e-127
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-...   454   e-125
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom...   442   e-122
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   426   e-116
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   419   e-114
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   419   e-114
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr...   417   e-114
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-...   415   e-113
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...   412   e-113
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe...   409   e-111
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-...   404   e-110
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp....   402   e-109
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   397   e-108
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps...   397   e-108
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha...   395   e-107
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr...   391   e-106
emb|CAB83107.1| sigma factor 3 [Sinapis alba]                         388   e-105
emb|CAD20832.1| sigma factor [Spinacia oleracea]                      380   e-103
gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlise...   377   e-102
gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]               377   e-102

>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum tuberosum]
          Length = 555

 Score =  459 bits (1181), Expect = e-127
 Identities = 226/319 (70%), Positives = 273/319 (85%)
 Frame = -1

Query: 993  ISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASL 814
            I  D QQPKF S  RT  SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+ 
Sbjct: 235  IQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATF 294

Query: 813  SSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMG 634
            SSWAEAAGI++KELQQ LH+GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAGNMG
Sbjct: 295  SSWAEAAGIEQKELQQRLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMG 354

Query: 633  VLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLS 454
            VLQGA RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARKTLS
Sbjct: 355  VLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLS 414

Query: 453  TSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSP 274
             S GK+P D EIAKFTGLS A+I  ASKCLRVV SIDQK+G+ I+ K +E+TPD SI SP
Sbjct: 415  RSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVLELTPDKSITSP 474

Query: 273  EETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIE 94
            EETV+RQ ++ ++Y+LL  L+P+E+QVI  RFGL  +QRKSLEEIGR++ VSKEWIR+IE
Sbjct: 475  EETVMRQDIVDNMYSLLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIE 534

Query: 93   RTALTKLRDEDCLKILGHY 37
            R ALTKLR+ D  + + HY
Sbjct: 535  RRALTKLRNADYFQHITHY 553


>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
            lycopersicum]
          Length = 551

 Score =  454 bits (1167), Expect = e-125
 Identities = 224/319 (70%), Positives = 269/319 (84%)
 Frame = -1

Query: 993  ISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASL 814
            I  D QQ KF S  RT  SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+A+ 
Sbjct: 231  IQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATF 290

Query: 813  SSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMG 634
            SSWA+AAGI++KELQQHLH+GW+CRDELL+STRSLV+++A+NY GLGVAFEDL+QAGNMG
Sbjct: 291  SSWAKAAGIEQKELQQHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMG 350

Query: 633  VLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLS 454
            VLQGA RFD TRGYKFSTYVQYWIRKS+S LVA+HARGVR+P T+ KVINQ+ KARKTLS
Sbjct: 351  VLQGAVRFDHTRGYKFSTYVQYWIRKSLSKLVAQHARGVRIPFTICKVINQIHKARKTLS 410

Query: 453  TSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSP 274
             S GK+P D EIAKFTGLS A+I  ASKCLRVV SIDQK+G+ IN K +E+TPD S+ SP
Sbjct: 411  RSHGKFPADDEIAKFTGLSTARIAMASKCLRVVGSIDQKVGDCINAKVLELTPDKSVTSP 470

Query: 273  EETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIE 94
            EE V+RQ ++ ++Y LL  L+P+E+QVI  RFGL  +QRKSLEEIGR++ VSKEWIR+IE
Sbjct: 471  EEFVMRQDIVDNMYALLESLDPKEQQVIYFRFGLETHQRKSLEEIGRLYGVSKEWIRRIE 530

Query: 93   RTALTKLRDEDCLKILGHY 37
            R ALTKLR  D  + + HY
Sbjct: 531  RRALTKLRSADYFQHITHY 549


>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
          Length = 848

 Score =  442 bits (1138), Expect = e-122
 Identities = 217/330 (65%), Positives = 272/330 (82%)
 Frame = -1

Query: 1023 IYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTIL 844
            I  Q + S+T+   FQ+PK  S  R S SR++R +IARNEAEMS GVK+VA LE++RT L
Sbjct: 517  ISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTL 576

Query: 843  EEETGQIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAF 664
            EEETG+ ASLS WAEAAG+ +K LQQHL +GW+CRDELLRSTRSLV++ A+NY GLG+A 
Sbjct: 577  EEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAH 636

Query: 663  EDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVIN 484
            EDL+QAG++GVLQGAERFD TRGY+FSTYVQ+WIRKS+S +VARHARG++VPCTLS+ I 
Sbjct: 637  EDLIQAGSLGVLQGAERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIV 696

Query: 483  QVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYME 304
            Q+QKARK LS S GKYPD+  IAKFTGLS+AKI SA+KC+RVV SIDQKIG+ +N KY+E
Sbjct: 697  QIQKARKALSKSHGKYPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLE 756

Query: 303  ITPDTSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFR 124
              PD S+ SPE+TV+RQHM  D++ LLNGL+ RE+QV++LR+GL  +  KSLEEIGR+F 
Sbjct: 757  FIPDLSVRSPEKTVMRQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFH 816

Query: 123  VSKEWIRKIERTALTKLRDEDCLKILGHYV 34
            VSKEWIR+IE  A+ KLRD++  + L HY+
Sbjct: 817  VSKEWIRRIEMKAMKKLRDKETCRNLSHYL 846


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  426 bits (1094), Expect = e-116
 Identities = 205/325 (63%), Positives = 264/325 (81%)
 Frame = -1

Query: 1008 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 829
            L S  I    ++P   S  + S+S+++R  IARNEAEM+ G+K++A+LEK+RT LEEET 
Sbjct: 234  LPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETE 293

Query: 828  QIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQ 649
            ++ SLS WAEAAG+  K LQQ L +GW+CRDEL++STRSLV++ A+NY G G+A EDL+Q
Sbjct: 294  RVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQ 353

Query: 648  AGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKA 469
            AGN+GVL+GAERFD TRGY+FSTYVQYWIRKSMS +V+R ARG+++PCTLS+ I Q+QKA
Sbjct: 354  AGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKA 413

Query: 468  RKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 289
            RK L+TS GKYPDD EIAK+TGLS+AKI SAS+CLRVV SIDQKIGE +N KY+E  PDT
Sbjct: 414  RKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDT 473

Query: 288  SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 109
            S+ SPEE V+RQHMI D++ LL  L+ RE+QV+ILRFGL + Q KSLEEIGR F VSKEW
Sbjct: 474  SVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEW 533

Query: 108  IRKIERTALTKLRDEDCLKILGHYV 34
            +R++E+  +T+LR+E+  + L HY+
Sbjct: 534  VRRLEKRVMTRLRNEETCRNLRHYI 558


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  419 bits (1077), Expect = e-114
 Identities = 214/357 (59%), Positives = 262/357 (73%)
 Frame = -1

Query: 1104 VSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKR 925
            + KV ++SG                  IY   L S TI +   +P   +  RT  SR KR
Sbjct: 203  LDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKR 262

Query: 924  QKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWH 745
               A+NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+
Sbjct: 263  LMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWY 322

Query: 744  CRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYW 565
            CRDELLRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAERFD T+GY+FSTYVQYW
Sbjct: 323  CRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYW 382

Query: 564  IRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKI 385
            IRKSMSTLVARHARGV++P TL++ I Q+QKARK L  S G+YPDD+EIAKFTGLS+AKI
Sbjct: 383  IRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKI 442

Query: 384  MSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDVYTLLNGLEPR 205
             SA  CLRVV S DQ   +      +E TPDTSI SPEE  ++Q    D++ LL GL+PR
Sbjct: 443  RSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPR 502

Query: 204  EKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCLKILGHYV 34
            E+Q+++LR+G G  QRKSLEEIGR F VSKEWIRK+E+TAL  LRDE+  + L HYV
Sbjct: 503  ERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYV 559


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  419 bits (1077), Expect = e-114
 Identities = 214/357 (59%), Positives = 262/357 (73%)
 Frame = -1

Query: 1104 VSKVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKR 925
            + KV ++SG                  IY   L S TI +   +P   +  RT  SR KR
Sbjct: 253  LDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKR 312

Query: 924  QKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWH 745
               A+NEAEMS GVK+VA LE++R  LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+
Sbjct: 313  LMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWY 372

Query: 744  CRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYW 565
            CRDELLRST SLV++IA+NY G+GVAFED++QAGN+GVLQGAERFD T+GY+FSTYVQYW
Sbjct: 373  CRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYW 432

Query: 564  IRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKI 385
            IRKSMSTLVARHARGV++P TL++ I Q+QKARK L  S G+YPDD+EIAKFTGLS+AKI
Sbjct: 433  IRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKI 492

Query: 384  MSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDVYTLLNGLEPR 205
             SA  CLRVV S DQ   +      +E TPDTSI SPEE  ++Q    D++ LL GL+PR
Sbjct: 493  RSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCKRKDIHNLLKGLDPR 552

Query: 204  EKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCLKILGHYV 34
            E+Q+++LR+G G  QRKSLEEIGR F VSKEWIRK+E+TAL  LRDE+  + L HYV
Sbjct: 553  ERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRDEEICQNLRHYV 609


>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
            gi|557553989|gb|ESR64003.1| hypothetical protein
            CICLE_v10007968mg [Citrus clementina]
          Length = 534

 Score =  417 bits (1072), Expect = e-114
 Identities = 195/330 (59%), Positives = 267/330 (80%)
 Frame = -1

Query: 1017 LQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEE 838
            L  L S+ +    +QP   SP R   SR +R  IARNEAEMS GV++VA LE+++T LE+
Sbjct: 205  LLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEK 264

Query: 837  ETGQIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFED 658
            E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+CR+EL++STR LV+F+A+NY GLG+ F D
Sbjct: 265  ESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFSD 324

Query: 657  LVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQV 478
            L+QAGN+GVLQGAERFD TRGYKFSTYVQYWIRKS+S +VARHARG+++PC L++ I+++
Sbjct: 325  LLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISKI 384

Query: 477  QKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEIT 298
            QKARK L+ S GKYP+D EIAK+TGLS+A+I SAS+CLR+V SIDQKIG+ +N KY+E  
Sbjct: 385  QKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEFA 444

Query: 297  PDTSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVS 118
            PD S+ SP+E V+RQHM  DV+ +L  L+ RE+QV++LR+GL +++ KSLEEIG++F VS
Sbjct: 445  PDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHVS 504

Query: 117  KEWIRKIERTALTKLRDEDCLKILGHYVYM 28
            KEWIRK+E+ A+TKLRD +  + L H++ +
Sbjct: 505  KEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
          Length = 534

 Score =  415 bits (1066), Expect = e-113
 Identities = 194/331 (58%), Positives = 266/331 (80%)
 Frame = -1

Query: 1020 YLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILE 841
            YL  L S+ +    +QP   S  R   SR +R  IARNEAEMS GV++VA LE+++T LE
Sbjct: 204  YLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLE 263

Query: 840  EETGQIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFE 661
            +E+G+ A L+ WA+AAG+ ++ L+QHL +GW+CR+EL++STR LV+F+A+NY GLG+ F 
Sbjct: 264  KESGKAARLNCWAQAAGVSERVLKQHLAFGWYCREELIKSTRPLVLFLARNYRGLGIPFS 323

Query: 660  DLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQ 481
            DL+QAGN+GVLQGAERFD TRGYKFSTYVQYWIRKS+S +VARHARG+++PC L++ I++
Sbjct: 324  DLLQAGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSISKMVARHARGIKIPCKLNREISK 383

Query: 480  VQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEI 301
            +QKARK L+ S GKYP+D EIAK+TGLS+A+I SAS+CLR+V SIDQKIG+ +N KY+E 
Sbjct: 384  IQKARKALTNSHGKYPEDIEIAKYTGLSLAEIRSASECLRIVGSIDQKIGDCLNAKYLEF 443

Query: 300  TPDTSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRV 121
             PD S+ SP+E V+RQHM  DV+ +L  L+ RE+QV++LR+GL +++ KSLEEIG++F V
Sbjct: 444  APDRSVKSPKEIVMRQHMKKDVFRILESLDSRERQVLVLRYGLNDHRPKSLEEIGKLFHV 503

Query: 120  SKEWIRKIERTALTKLRDEDCLKILGHYVYM 28
            SKEWIRK+E+ A+TKLRD +  + L H++ +
Sbjct: 504  SKEWIRKLEKKAMTKLRDSETCRDLSHFLVL 534


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
            gi|222854562|gb|EEE92109.1| hypothetical protein
            POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score =  412 bits (1060), Expect = e-113
 Identities = 202/327 (61%), Positives = 257/327 (78%)
 Frame = -1

Query: 1008 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 829
            L S T+  +  +P FV   RTS S ++R  IARNEA+M+ GVK+ ++LE++RT LEEETG
Sbjct: 235  LPSKTVQNNLPKPTFVK--RTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETG 292

Query: 828  QIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQ 649
            Q+ SLS WAEA G+ KK LQQ L +GW+CRDEL+++T SLV++IA+NY G+G+A EDL+Q
Sbjct: 293  QVVSLSCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQ 352

Query: 648  AGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKA 469
            AGN+G+LQGAERFD TRGY+FSTYVQYWIRKSM  +V RHARG+++P  LS+ IN++QKA
Sbjct: 353  AGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKA 412

Query: 468  RKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 289
            RK LS S G+YPDD E+AKFTGLS+AKI SA KCLRVV S+DQKIGEG   KY E  PD 
Sbjct: 413  RKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSEFIPDM 472

Query: 288  SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 109
            SI +PEE V+RQHM  ++Y LL GL+ REKQV++LR+G  +NQ KSL EIGR+FRVSKE 
Sbjct: 473  SIQNPEEAVMRQHMREEIYDLLRGLDSREKQVMVLRYGFKDNQPKSLAEIGRLFRVSKER 532

Query: 108  IRKIERTALTKLRDEDCLKILGHYVYM 28
            +RKIE+  + KLRDE   + L  Y+ +
Sbjct: 533  VRKIEKKIMIKLRDEGIRRNLSRYMIL 559


>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score =  409 bits (1051), Expect = e-111
 Identities = 203/325 (62%), Positives = 257/325 (79%)
 Frame = -1

Query: 1008 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 829
            L   TI +  ++P   S  R S  R++R  I++NEAEMS GVK++A+LE+++  LE+ETG
Sbjct: 229  LPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETG 288

Query: 828  QIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQ 649
            ++A+L  WAEAAG+ +K L QHL +GW+C+DEL+RSTRSLV+++A+NY GLGVA +DL+Q
Sbjct: 289  KVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIRSTRSLVLYLARNYRGLGVALDDLMQ 348

Query: 648  AGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKA 469
            AGN+G+LQGAERFD +RGY+FSTYVQYWIRKSMS LVA+HARGV++P TLSK INQ+QKA
Sbjct: 349  AGNLGLLQGAERFDHSRGYRFSTYVQYWIRKSMSRLVAQHARGVQIPFTLSKAINQIQKA 408

Query: 468  RKTLSTSTGKYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 289
            RK    S  KYPDD EIAK TGLS+A+I SAS CLRVV S+D K+ E  +  YME TPDT
Sbjct: 409  RKANYNSHMKYPDDEEIAKITGLSLARIRSASTCLRVVGSVDHKMWESSDGTYMEFTPDT 468

Query: 288  SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 109
            S+ SPEETV+RQHM  D++ LL GL  RE+QV++LR+GL N   KSLEEIGR+F VSKEW
Sbjct: 469  SLKSPEETVMRQHMKKDIHDLLKGLNLRERQVLVLRYGLNNYDPKSLEEIGRLFHVSKEW 528

Query: 108  IRKIERTALTKLRDEDCLKILGHYV 34
            IRKIE+ AL KLR E+  K L HY+
Sbjct: 529  IRKIEKKALMKLRVEESHKYLSHYL 553


>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
            subsp. vesca]
          Length = 545

 Score =  404 bits (1038), Expect = e-110
 Identities = 199/316 (62%), Positives = 255/316 (80%)
 Frame = -1

Query: 981  FQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWA 802
            F++P   S  R S SR++R  +A+NEAEMS GVK++A+LE+L+  LE+ETG++ +L  WA
Sbjct: 227  FKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWA 286

Query: 801  EAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQG 622
            EAAG+ +K LQQ LH+GW+C+DEL+RSTRSLV+++A+NY GLGVA +DL+QAGN+G+LQG
Sbjct: 287  EAAGVDEKVLQQQLHFGWYCQDELVRSTRSLVLYLARNYRGLGVALDDLLQAGNLGLLQG 346

Query: 621  AERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG 442
            AERFD +RGY+FSTYVQYWIRKSMS LVA+HARG+++P TLSK IN++QKARK    S  
Sbjct: 347  AERFDPSRGYRFSTYVQYWIRKSMSRLVAQHARGIKIPNTLSKAINRIQKARKANYNSHM 406

Query: 441  KYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETV 262
            KYPDD EIAK TGLS+AKI SAS+CLRVV S+D KI E     YME TPD ++ +PEE+V
Sbjct: 407  KYPDDEEIAKITGLSLAKISSASRCLRVVGSVDHKIWECSAGTYMEFTPDIAVETPEESV 466

Query: 261  IRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTAL 82
            +RQHM +D++ LL GL  REK+V+ LR+GL     KSLEEIGR+F VSKEWIRKIE+ AL
Sbjct: 467  MRQHMKNDIHVLLEGLNSREKKVLALRYGLNYCNPKSLEEIGRLFHVSKEWIRKIEKNAL 526

Query: 81   TKLRDEDCLKILGHYV 34
            TKLR+E+  K L HY+
Sbjct: 527  TKLRNEESNKNLSHYL 542


>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323785|gb|EFH54206.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 568

 Score =  402 bits (1033), Expect = e-109
 Identities = 195/307 (63%), Positives = 256/307 (83%), Gaps = 1/307 (0%)
 Frame = -1

Query: 951  RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 772
            R  + R KR++I++NEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K L
Sbjct: 260  RPPKYRKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLL 319

Query: 771  QQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGY 592
             ++LHYGW+CRDELL+STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAERFD TRGY
Sbjct: 320  MRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGY 379

Query: 591  KFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-KYPDDSEIA 415
            KFSTYVQYWIRKSMS +V+RHARGV +P ++ + INQ+QKARKTL TS G KYP D +I+
Sbjct: 380  KFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEDIS 439

Query: 414  KFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDV 235
            K T LSV KI +A++CL+VV SI++K+G+  + K++E TPDT++ SPEE V+RQ    D+
Sbjct: 440  KLTSLSVKKIRAANQCLKVVGSIEKKVGDCFSTKFLEFTPDTTMESPEEAVMRQSARRDI 499

Query: 234  YTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCL 55
            + LL GLEPREKQV++LR+GL N + KSLEEIG++ RVSKEWIRKIER A+ KLRD+   
Sbjct: 500  HDLLEGLEPREKQVMVLRYGLQNYRPKSLEEIGKLLRVSKEWIRKIERRAMAKLRDQPNA 559

Query: 54   KILGHYV 34
            + L +Y+
Sbjct: 560  EDLRYYL 566


>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 571

 Score =  397 bits (1020), Expect = e-108
 Identities = 193/307 (62%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
 Frame = -1

Query: 951  RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 772
            R  + R KR++I+RNE EMSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K L
Sbjct: 263  RPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLL 322

Query: 771  QQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGY 592
             ++LHYGW+CRDEL++STRSLV+F+A+NY G+G+A EDL+QAG +GVLQGAERFD TRGY
Sbjct: 323  MRNLHYGWYCRDELVKSTRSLVLFLARNYRGMGIAHEDLIQAGYVGVLQGAERFDHTRGY 382

Query: 591  KFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-KYPDDSEIA 415
            KFSTYVQYWIRKSMST+V+RHARGV +P ++ + IN +QKARKTL TS G KY  D EIA
Sbjct: 383  KFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIA 442

Query: 414  KFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDV 235
            K TG SV KI +A++CL+VV SID+K+G+    K++E TPDT++ SPEE V+RQ    D+
Sbjct: 443  KLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDI 502

Query: 234  YTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCL 55
            + LL GLEPREKQV++LR+GL + + KSLEEIG++F+VSKEWIRKIER A+ KLRD+   
Sbjct: 503  HDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLFKVSKEWIRKIERRAMAKLRDQPNA 562

Query: 54   KILGHYV 34
            + L +Y+
Sbjct: 563  EDLRYYL 569


>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
            gi|482559522|gb|EOA23713.1| hypothetical protein
            CARUB_v10016920mg [Capsella rubella]
          Length = 581

 Score =  397 bits (1020), Expect = e-108
 Identities = 194/307 (63%), Positives = 253/307 (82%), Gaps = 1/307 (0%)
 Frame = -1

Query: 951  RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 772
            R  + R KR++I+RNEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K L
Sbjct: 273  RPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLL 332

Query: 771  QQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGY 592
             ++LHYGW+CRDELL+STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAERFD  RGY
Sbjct: 333  MRNLHYGWYCRDELLKSTRSLVLFLARNYRGLGIAHEDLIQAGFVGVLQGAERFDHARGY 392

Query: 591  KFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-KYPDDSEIA 415
            KFSTYVQYWIRKSMS +V+RHARGV +P ++ + INQ+QKARKTL TS G KYP D EI+
Sbjct: 393  KFSTYVQYWIRKSMSMMVSRHARGVHIPSSIIRTINQIQKARKTLKTSHGIKYPADEEIS 452

Query: 414  KFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDV 235
            K T LSV KI +A++CL+VV SI+ K+G+  + K++E TPDT + SPEE V+RQ    D+
Sbjct: 453  KLTSLSVKKIRAANQCLKVVGSIENKVGDCFSTKFLEFTPDTMMESPEEAVMRQSARRDL 512

Query: 234  YTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCL 55
            + LL GLEPREKQV++LR+GL + + KSLEEIG++ RVSKEWIR+IER A+ KLRD+   
Sbjct: 513  HDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLRVSKEWIRRIERRAMAKLRDQPNA 572

Query: 54   KILGHYV 34
            + L +Y+
Sbjct: 573  EDLRYYL 579


>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
            gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
            polymerase sigma factor sigC; Short=Sigma factor C;
            Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
            sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
            Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
            [Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
            [Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
            factor SigC [Arabidopsis thaliana]
            gi|7630012|emb|CAB88354.1| sigma factor SigC [Arabidopsis
            thaliana] gi|133778870|gb|ABO38775.1| At3g53920
            [Arabidopsis thaliana] gi|332645638|gb|AEE79159.1|
            RNApolymerase sigma-subunit C [Arabidopsis thaliana]
          Length = 571

 Score =  395 bits (1016), Expect = e-107
 Identities = 193/307 (62%), Positives = 252/307 (82%), Gaps = 1/307 (0%)
 Frame = -1

Query: 951  RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 772
            R  + R KR++I+RNE EMSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K L
Sbjct: 263  RPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLL 322

Query: 771  QQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGY 592
             ++LHYGW+CRDEL++STRSLV+F+A+NY GLG+A EDL+QAG +GVLQGAERFD TRGY
Sbjct: 323  MRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGY 382

Query: 591  KFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTG-KYPDDSEIA 415
            KFSTYVQYWIRKSMST+V+RHARGV +P ++ + IN +QKARKTL TS G KY  D EIA
Sbjct: 383  KFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIA 442

Query: 414  KFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDV 235
            K TG SV KI +A++CL+VV SID+K+G+    K++E TPDT++ SPEE V+RQ    D+
Sbjct: 443  KLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDI 502

Query: 234  YTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCL 55
            + LL GLEPREKQV++LR+GL + + KSLEEIG++ +VSKEWIRKIER A+ KLRD+   
Sbjct: 503  HDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNA 562

Query: 54   KILGHYV 34
            + L +Y+
Sbjct: 563  EDLRYYL 569


>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
            gi|312281919|dbj|BAJ33825.1| unnamed protein product
            [Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
            hypothetical protein EUTSA_v10010251mg [Eutrema
            salsugineum]
          Length = 562

 Score =  391 bits (1005), Expect = e-106
 Identities = 194/326 (59%), Positives = 259/326 (79%), Gaps = 1/326 (0%)
 Frame = -1

Query: 1008 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 829
            + S T   D   P+     ++S+ R KR++I+RNEAEMS G K+VA++E++RT LEEE+G
Sbjct: 238  IGSRTTWNDIDAPRLR---KSSKYRKKRERISRNEAEMSAGAKIVADMERIRTKLEEESG 294

Query: 828  QIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQ 649
            ++AS+S WAEAAG+ +  L ++LHYGW+CRDELL+STRSLV+F+++NY GLG+A EDL+Q
Sbjct: 295  KVASMSCWAEAAGMNEILLMRNLHYGWYCRDELLKSTRSLVLFLSRNYRGLGIAHEDLIQ 354

Query: 648  AGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKA 469
            AGN+GVLQGAERFD TRGYKFSTYVQYWIRKSMS +V+RHARGV +P ++ + ++Q+QKA
Sbjct: 355  AGNVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVYIPSSVIRTMSQIQKA 414

Query: 468  RKTLSTSTG-KYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPD 292
            RKTL TS G KYP D EI+K TG S+ KI +A++CL+VV SID+K+G+    K++E TPD
Sbjct: 415  RKTLKTSHGIKYPADEEISKETGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPD 474

Query: 291  TSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKE 112
            T++ SPEE V+RQ    DV+ LL GLEPREKQV++LR+GL   + KSLEEIG++ +VSKE
Sbjct: 475  TTMESPEEAVMRQSAWRDVHDLLQGLEPREKQVMVLRYGLQGFRPKSLEEIGKLLKVSKE 534

Query: 111  WIRKIERTALTKLRDEDCLKILGHYV 34
            WIRKIER A+ KLRD+   + L  Y+
Sbjct: 535  WIRKIERRAMAKLRDQANAENLRFYL 560


>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
          Length = 567

 Score =  388 bits (997), Expect = e-105
 Identities = 193/326 (59%), Positives = 257/326 (78%), Gaps = 1/326 (0%)
 Frame = -1

Query: 1008 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 829
            +SS T       P+   P   S+ R KR++I+RNEAEMS GVK+VA++E++RT LEEETG
Sbjct: 243  ISSRTTWEGIDVPRVRKP---SKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEETG 299

Query: 828  QIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQ 649
            ++AS+S WAEAAG+ +K L  +LH+GW+CRDEL++STRSLV+F+A+NY GLG+A EDL+Q
Sbjct: 300  KVASMSCWAEAAGMNQKLLMHNLHFGWYCRDELVKSTRSLVLFLARNYRGLGIAHEDLIQ 359

Query: 648  AGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKA 469
            AG +GVLQGAERFD TRGYKFSTYV+YWIRKSMST+V+RHARGV +P ++ + ++Q+QKA
Sbjct: 360  AGYVGVLQGAERFDHTRGYKFSTYVRYWIRKSMSTMVSRHARGVHIPASIIRTMSQIQKA 419

Query: 468  RKTLSTSTG-KYPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPD 292
            RKTL TS G KYP D EI+K TG S+ KI +A++CL+VV SID+K+G+    +++E TPD
Sbjct: 420  RKTLKTSQGIKYPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTRFLEFTPD 479

Query: 291  TSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKE 112
             ++ SPEE V+RQ    +V+ LL GLEPREKQV++LR+GL +   KSLEEIG++ RVSKE
Sbjct: 480  PTMESPEEAVMRQSARGEVHNLLEGLEPREKQVMVLRYGLQDYSPKSLEEIGKILRVSKE 539

Query: 111  WIRKIERTALTKLRDEDCLKILGHYV 34
             IRKIER A+ KLRD+     L +Y+
Sbjct: 540  GIRKIERRAMAKLRDQPKADNLRYYL 565


>emb|CAD20832.1| sigma factor [Spinacia oleracea]
          Length = 548

 Score =  380 bits (976), Expect = e-103
 Identities = 186/306 (60%), Positives = 245/306 (80%)
 Frame = -1

Query: 951  RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 772
            + +++R +R  IA+NEAEMS G+K+VA+LEK++  LE+ETG+  SL+ WAEAAGI +K L
Sbjct: 242  KKTKARGRRAIIAKNEAEMSRGIKVVAQLEKVKLTLEKETGKAVSLNCWAEAAGIDEKVL 301

Query: 771  QQHLHYGWHCRDELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGY 592
            Q  LH+GW+CRDELL+S RSLV+++++ Y GLGVA EDL+QAGN+G+LQGAERFD TRGY
Sbjct: 302  QHDLHFGWYCRDELLKSGRSLVLYLSRYYRGLGVAHEDLMQAGNIGILQGAERFDHTRGY 361

Query: 591  KFSTYVQYWIRKSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAK 412
            +FSTYVQYWIRK+MS LV+RH RG++VP TLS  IN+VQKARK L  S GK+PDD E++K
Sbjct: 362  QFSTYVQYWIRKAMSQLVSRHGRGIKVPTTLSTTINRVQKARKILKRSQGKHPDDVEVSK 421

Query: 411  FTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDVY 232
             TGLS+ KI SA  CLR+V S+DQK+G  IN+KY+E TPDT++  PE+TV++QHM +DV+
Sbjct: 422  STGLSLDKIKSADNCLRIVGSLDQKVGHFINMKYLECTPDTALEMPEKTVMKQHMRNDVH 481

Query: 231  TLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCLK 52
             LL  L+P+E++V+I R+GL      SL E+G+VF VSKEWIRK+E+ ALTKLR E    
Sbjct: 482  KLLQELDPKERRVLIHRYGL-EGHCMSLHEVGKVFDVSKEWIRKMEKRALTKLRTEQNQT 540

Query: 51   ILGHYV 34
             L HY+
Sbjct: 541  NLKHYL 546


>gb|EPS65656.1| hypothetical protein M569_09119, partial [Genlisea aurea]
          Length = 463

 Score =  377 bits (969), Expect = e-102
 Identities = 185/345 (53%), Positives = 254/345 (73%), Gaps = 2/345 (0%)
 Frame = -1

Query: 1098 KVFIQSGXXXXXXXXXXXXXXXXSAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQK 919
            KV +QSG                +     + +S  + ++F+ PK  S    +RSR K+Q+
Sbjct: 115  KVIVQSGKKELRKLRRKRAVDFEAGNLSLQFTSRDVRKNFRTPKTDSARAVARSRYKKQR 174

Query: 918  IARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHCR 739
            I ++E++M+ G K+V ELE++R  +E+E+G+  S S WAEAA I+ KEL++ L+YGWHCR
Sbjct: 175  ITQSESDMAAGFKLVTELERIRKKVEDESGETPSFSRWAEAARIESKELKRRLNYGWHCR 234

Query: 738  DELLRSTRSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIR 559
            D+LL+S+RSLV+FIA+NYWGLG+AFEDL+QAGNM VL+GAERFDQ+RGYKFSTYVQYWIR
Sbjct: 235  DQLLKSSRSLVVFIARNYWGLGIAFEDLIQAGNMAVLRGAERFDQSRGYKFSTYVQYWIR 294

Query: 558  KSMSTLVARHARGVRVPCTLSKVINQVQKARKTLSTSTGKYPDDSEIAKFTGLSVAKIMS 379
            KSMS LVA H+RG+R+P T++KVINQVQ ARK L  +TG+ P D E+AK TG+S+ +I S
Sbjct: 295  KSMSMLVANHSRGIRIPGTMNKVINQVQNARKQLCAATGRTPSDLEVAKLTGISLERIRS 354

Query: 378  ASKCLRVVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDVYTLLNGLEPREK 199
            A +C RVV S+D+++G       ME+T D SI SPEE  +R+    DV  ++ GLE RE+
Sbjct: 355  AGRCPRVVGSVDRRVGNPPGTLLMEVTADESICSPEEAAVREERARDVERMVRGLEWRER 414

Query: 198  QVIILRFGLG--NNQRKSLEEIGRVFRVSKEWIRKIERTALTKLR 70
            +V++LRFGLG  + ++KSL+EIG++  VSKEW+R+IE TAL KLR
Sbjct: 415  EVLVLRFGLGRRDGEKKSLQEIGKILCVSKEWVRRIETTALAKLR 459


>gb|AAM91534.1| sigma factor SigC [Arabidopsis thaliana]
          Length = 291

 Score =  377 bits (968), Expect = e-102
 Identities = 184/289 (63%), Positives = 239/289 (82%), Gaps = 1/289 (0%)
 Frame = -1

Query: 897 MSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHCRDELLRST 718
           MSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K L ++LHYGW+CRDEL++ST
Sbjct: 1   MSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKST 60

Query: 717 RSLVMFIAKNYWGLGVAFEDLVQAGNMGVLQGAERFDQTRGYKFSTYVQYWIRKSMSTLV 538
           RSLV+F+A+NY GLG+A EDL+QAG +GVLQGAERFD TRGYKFSTYVQYWIRKSMST+V
Sbjct: 61  RSLVLFLARNYRGLGIAHEDLIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMV 120

Query: 537 ARHARGVRVPCTLSKVINQVQKARKTLSTSTG-KYPDDSEIAKFTGLSVAKIMSASKCLR 361
           +RHARGV +P ++ + IN +QKARKTL TS G KY  D EIAK TG SV KI +A++CL+
Sbjct: 121 SRHARGVHIPSSIIRTINHIQKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLK 180

Query: 360 VVRSIDQKIGEGINIKYMEITPDTSIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILR 181
           VV SID+K+G+    K++E TPDT++ SPEE V+RQ    D++ LL GLEPREKQV++LR
Sbjct: 181 VVGSIDKKVGDCFTTKFLEFTPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLR 240

Query: 180 FGLGNNQRKSLEEIGRVFRVSKEWIRKIERTALTKLRDEDCLKILGHYV 34
           +GL + + KSLEEIG++ +VSKEWIRKIER A+ KLRD+   + L +Y+
Sbjct: 241 YGLQDYRPKSLEEIGKLLKVSKEWIRKIERRAMAKLRDQPNAEDLRYYL 289