BLASTX nr result
ID: Rehmannia24_contig00013667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00013667
(459 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
emb|CBI22850.3| unnamed protein product [Vitis vinifera] 95 8e-18
ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containi... 95 1e-17
ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citr... 84 3e-14
gb|EMJ25641.1| hypothetical protein PRUPE_ppa022250mg [Prunus pe... 82 1e-13
ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containi... 80 2e-13
ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protei... 80 4e-13
gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis] 79 6e-13
ref|XP_002314968.2| pentatricopeptide repeat-containing family p... 79 8e-13
gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japo... 78 1e-12
ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group] g... 78 1e-12
ref|XP_004960395.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays] 76 5e-12
gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays] 76 5e-12
>ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/96 (51%), Positives = 65/96 (67%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHRM 183
T N++I AY K G V A QL++++S HPDI+AY+SLI GI G+E A YL RM
Sbjct: 563 TVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRM 622
Query: 184 ISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
+SEGI PN + WN LVR LFS +G AV+ ++A+L
Sbjct: 623 LSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVL 658
>emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 95.1 bits (235), Expect = 8e-18
Identities = 48/94 (51%), Positives = 63/94 (67%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHRM 183
T N++I AY K G V A QL++++S HPDI+AY+SLI GI G+E A YL RM
Sbjct: 563 TVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRM 622
Query: 184 ISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNA 285
+SEGI PN + WN LVR LFS +G AV+ ++A
Sbjct: 623 LSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDA 656
>ref|XP_006338000.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum tuberosum]
Length = 663
Score = 94.7 bits (234), Expect = 1e-17
Identities = 50/96 (52%), Positives = 66/96 (68%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHRM 183
TFN+L++AY K G VE A QLL MS+V L P ++Y+ LI G+ GLEAA L +M
Sbjct: 565 TFNILMNAYCKGGKVESAKQLLNAMSQVGLRPGFISYTCLIDGLCSWVGLEAAICCLQKM 624
Query: 184 ISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
I++GI P S WN LVR LFSKIG A+E++N++L
Sbjct: 625 INDGIPPMISTWNVLVRHLFSKIGYGSALEYLNSIL 660
>ref|XP_004229098.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Solanum lycopersicum]
Length = 663
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/96 (51%), Positives = 66/96 (68%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHRM 183
TFN+L++AY K G VE A QLL MS+V L P ++Y+ LI G+ GLEAA L +M
Sbjct: 565 TFNILMNAYCKGGKVESAKQLLNAMSQVGLRPGFISYTCLIDGLCSWVGLEAAICCLQKM 624
Query: 184 ISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
I++GI P S WN LVR LFSKIG A+E+++++L
Sbjct: 625 INDGIPPKISTWNVLVRHLFSKIGYGSALEYLDSIL 660
>ref|XP_006488802.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Citrus sinensis]
Length = 661
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKM-SKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
TFN++I+AY K G V A QLL+++ +PDI++Y+SL+ GI G++ A YL +
Sbjct: 562 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 621
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIG 255
M++EGI PN + WN LVRSLFS +G
Sbjct: 622 MLNEGICPNFATWNVLVRSLFSNLG 646
>ref|XP_006419330.1| hypothetical protein CICLE_v10004501mg [Citrus clementina]
gi|557521203|gb|ESR32570.1| hypothetical protein
CICLE_v10004501mg [Citrus clementina]
Length = 661
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/85 (48%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKM-SKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
TFN++I+AY K G V A QLL+++ +PDI++Y+SL+ GI G++ A YL +
Sbjct: 562 TFNIIIYAYCKQGKVNNAIQLLDRIRGGGEWNPDIISYTSLLWGICNSGGMQEAFIYLQK 621
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIG 255
M++EGI PN + WN LVRSLFS +G
Sbjct: 622 MLNEGICPNFATWNVLVRSLFSNLG 646
>gb|EMJ25641.1| hypothetical protein PRUPE_ppa022250mg [Prunus persica]
Length = 581
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVS-LHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N++I+AY K G + ATQ+ + PD++AY+SL+ GI GL+ A YLH+
Sbjct: 482 TYNIIIYAYCKQGRISTATQIFNSIGAAKEWQPDVIAYTSLLSGICNSIGLDEAMVYLHK 541
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
MI EGI P+ WN LVR FS +G + + ++ +L
Sbjct: 542 MIREGICPSIGTWNVLVRCFFSTLGQLEPIYILDDIL 578
>ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVS-LHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N +IHAY K G V+ A QL+E++S + HPDI+ Y+SLI G +E A ++L +
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDK 620
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
I++GI PN + WN LVR F +G + + ++ +L
Sbjct: 621 AINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657
>ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVS-LHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N +IHAY K G V+ A QL+E++S + HPDI+ Y+SLI G +E A ++L +
Sbjct: 561 TYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDK 620
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
I++GI PN + WN LVR F +G + + ++ +L
Sbjct: 621 AINQGICPNFATWNALVRCFFDSLGHMGPIHILDDIL 657
>ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/98 (39%), Positives = 62/98 (63%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTFN +IHAY K G V A +L +M V+ +IVAY+SL+ G+ + L+ A YL +
Sbjct: 543 FTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLK 602
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALLD 294
M+ EGI PN + WN LVR +F+ +G + + ++ +++
Sbjct: 603 MLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHIIE 640
>ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/97 (41%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSK-VSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T N++I+AYSK G V A Q L++++ L PDI+A++SL+ GI G+E A YL++
Sbjct: 565 TVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNK 624
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
M+++GIFPN + W+ LVR F K+G + + ++ +L
Sbjct: 625 MLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDIL 661
>gb|EOY06793.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 664
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVS-LHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N++I Y K G V+ A QL +++S HPDI++Y+SL+ G+ GLE S L++
Sbjct: 565 TYNIIIFTYCKRGKVKIAVQLFDRISAGGDWHPDIISYTSLLWGLCNWIGLEEGISLLNK 624
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
MI+EGI PN + WN LV+ LF+ +G + + ++ +L
Sbjct: 625 MINEGICPNVATWNVLVQCLFNSLGHLGPIHILDDIL 661
>gb|EXB94360.1| hypothetical protein L484_005954 [Morus notabilis]
Length = 653
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKM-SKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N LI+AY K V A QL E++ S PD++ Y+SL+ GI GLE A YL +
Sbjct: 554 TYNTLIYAYCKQDRVRTAIQLFERIGSSKKWRPDVMTYTSLMWGICNSIGLEEAIVYLQK 613
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
M+SEG++PN + WN LVR F+ +G + + ++ +L
Sbjct: 614 MVSEGVWPNFATWNVLVRCFFNTLGHLGPIHVVDDIL 650
>ref|XP_002314968.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550329900|gb|EEF01139.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 662
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/97 (40%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSL-HPDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N +I+AY K G V+ A QL+++++K +PD+ Y+SL+ G+ G++ A +L +
Sbjct: 560 TYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDK 619
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
MI+EGI PN + WN LVR LFSK+G + + ++ +L
Sbjct: 620 MINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656
>gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/87 (44%), Positives = 55/87 (63%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTFN +IHAY K G V A LL +M+ V+ ++VAY+ LI + + L A YL +
Sbjct: 485 FTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLK 544
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIV 261
M+ EGI PN + WN LVR++F+ IG +
Sbjct: 545 MLYEGICPNEATWNVLVRAIFTNIGTI 571
>ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza
sativa Japonica Group] gi|113578106|dbj|BAF16469.1|
Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein
OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/87 (44%), Positives = 55/87 (63%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTFN +IHAY K G V A LL +M+ V+ ++VAY+ LI + + L A YL +
Sbjct: 538 FTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLK 597
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIV 261
M+ EGI PN + WN LVR++F+ IG +
Sbjct: 598 MLYEGICPNEATWNVLVRAIFTNIGTI 624
>ref|XP_004960395.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Setaria italica]
Length = 645
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/91 (40%), Positives = 56/91 (61%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTFN +I+AY K G + A +L M+ V+ +IVAY+ L+ + + LE A YL +
Sbjct: 542 FTFNAMIYAYCKEGKIRMAAWMLGGMNAVNCPRNIVAYTILMAELCNQHRLEDAMVYLLK 601
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVE 273
M+ EGI+PNT+ WN LVR F +G + ++
Sbjct: 602 MLYEGIYPNTATWNVLVRGAFRNLGCIEPID 632
>ref|XP_004295051.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Fragaria vesca subsp. vesca]
Length = 666
Score = 77.0 bits (188), Expect = 2e-12
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLH-PDIVAYSSLICGISEKSGLEAASSYLHR 180
T+N+LI+ + K G +E A QL PD++ Y+SL+ GI GL+ A YLH+
Sbjct: 567 TYNILIYFFCKQGRIESAIQLFNSTGAAKEWCPDVITYTSLLWGICSSIGLDEAMVYLHK 626
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALL 291
MISEGI PN WN LV+ FS +G + + ++ +L
Sbjct: 627 MISEGICPNFGTWNVLVQCFFSSLGHLGPIYILDEIL 663
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/98 (32%), Positives = 48/98 (48%)
Frame = +1
Query: 4 TFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHRM 183
TF LI Y G V A L +M P++VAY+++I G+ + A S LH M
Sbjct: 322 TFTSLIKGYFMEGRVSEALDLWNRMVCEGFEPNVVAYTTVIHGLCSVGNMRKAISVLHEM 381
Query: 184 ISEGIFPNTSMWNFLVRSLFSKIGIVRAVEHMNALLDC 297
+G PN + ++ L+ +VRA E N ++DC
Sbjct: 382 QKKGCSPNVTTYSTLIDGFAKAGNLVRASETWNNMMDC 419
>gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTF+ +IHAY K G V A +L M+ V+ H +I+ Y+ L+ + + L A +YL +
Sbjct: 540 FTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLK 599
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIV 261
M+ EGI+PNT WN LVR +F +G +
Sbjct: 600 MLYEGIYPNTVTWNVLVRGVFRNLGCI 626
>gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 620
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 1 FTFNMLIHAYSKHGMVEFATQLLEKMSKVSLHPDIVAYSSLICGISEKSGLEAASSYLHR 180
FTF+ +IHAY K G V A +L M+ V+ H +I+ Y+ L+ + + L A +YL +
Sbjct: 517 FTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLK 576
Query: 181 MISEGIFPNTSMWNFLVRSLFSKIGIV 261
M+ EGI+PNT WN LVR +F +G +
Sbjct: 577 MLYEGIYPNTVTWNVLVRGVFRNLGCI 603