BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00013597
         (444 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlise...   266   2e-69
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   249   2e-64
gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notab...   247   1e-63
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   247   1e-63
ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutr...   247   1e-63
ref|XP_004300085.1| PREDICTED: splicing factor U2af small subuni...   247   1e-63
dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]     247   1e-63
gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein ...   246   3e-63
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   245   5e-63
ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Caps...   243   2e-62
ref|NP_174086.1| splicing factor U2af small subunit A [Arabidops...   241   6e-62
ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arab...   241   6e-62
ref|NP_001077609.1| splicing factor U2af small subunit A [Arabid...   241   6e-62
ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [A...   241   7e-62
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab...   241   7e-62
ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidops...   241   7e-62
ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit fami...   241   9e-62
ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [S...   239   4e-61
ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Popu...   239   4e-61
ref|XP_004969477.1| PREDICTED: splicing factor U2af small subuni...   235   4e-60

>gb|EPS71674.1| hypothetical protein M569_03083, partial [Genlisea aurea]
          Length = 278

 Score =  266 bits (681), Expect = 2e-69
 Identities = 130/147 (88%), Positives = 137/147 (93%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           IEARKIQEHFEDFFEDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA
Sbjct: 69  IEARKIQEHFEDFFEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           L+GRFYSGRPIIADFSPVTDFREATCRQYEE+SCNRGGYCNFMHVKMIGR+LR+KLFG+ 
Sbjct: 129 LRGRFYSGRPIIADFSPVTDFREATCRQYEEDSCNRGGYCNFMHVKMIGRDLRKKLFGRR 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRER 442
               R+WG RSRSRS SPP H HRRER
Sbjct: 189 QI--RFWGRRSRSRSASPP-HFHRRER 212


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  249 bits (637), Expect = 2e-64
 Identities = 123/149 (82%), Positives = 134/149 (89%), Gaps = 2/149 (1%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+ RKIQEHFEDF+EDIYEEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL A
Sbjct: 69  IDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVKMIG++LRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP--PQHHHRRER 442
                Y  +RSRSRS+SP   + H RRER
Sbjct: 189 R---GYRASRSRSRSLSPRNRKEHDRRER 214


>gb|EXB56251.1| Splicing factor U2af small subunit A [Morus notabilis]
          Length = 348

 Score =  247 bits (631), Expect = 1e-63
 Identities = 118/144 (81%), Positives = 131/144 (90%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+  KIQEHFEDF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEED AAAAL A
Sbjct: 69  IDPHKIQEHFEDFYEDIFEELCKFGEIESLNVCDNLADHMIGNVYVQFKEEDHAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFY+GRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 129 LQGRFYNGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHR 433
                Y  +RSRSRS+SPP+HH R
Sbjct: 189 R---GYRVSRSRSRSLSPPRHHRR 209


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  247 bits (631), Expect = 1e-63
 Identities = 121/147 (82%), Positives = 134/147 (91%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+ RKIQEHFEDF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL A
Sbjct: 69  IDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRER 442
                Y  +RSRSRSVSP +  HRRE+
Sbjct: 189 R---GYRASRSRSRSVSPSR--HRREK 210


>ref|XP_006415744.1| hypothetical protein EUTSA_v10008280mg [Eutrema salsugineum]
           gi|557093515|gb|ESQ34097.1| hypothetical protein
           EUTSA_v10008280mg [Eutrema salsugineum]
          Length = 308

 Score =  247 bits (630), Expect = 1e-63
 Identities = 119/146 (81%), Positives = 132/146 (90%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRE 439
               R  G+RSRSRS+SP    H+RE
Sbjct: 189 RRSYRR-GSRSRSRSISP---RHKRE 210


>ref|XP_004300085.1| PREDICTED: splicing factor U2af small subunit B-like [Fragaria
           vesca subsp. vesca]
          Length = 280

 Score =  247 bits (630), Expect = 1e-63
 Identities = 118/146 (80%), Positives = 133/146 (91%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQ+HFEDF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQDHFEDFYEDIFEELDKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFY+GRPIIADFSPVTDFREATCRQ+EENSCNRGGYCNFMHVK+IGRELRRKL+G++
Sbjct: 129 LQGRFYNGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGRELRRKLYGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRE 439
               R   +RSRSRS+SPP+H   R+
Sbjct: 189 RGF-RASRSRSRSRSLSPPRHRRDRD 213


>dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
          Length = 308

 Score =  247 bits (630), Expect = 1e-63
 Identities = 119/146 (81%), Positives = 132/146 (90%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRE 439
               R  G+RSRSRS+SP    H+RE
Sbjct: 189 RRSYRR-GSRSRSRSISP---RHKRE 210


>gb|EOX94588.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 1
           [Theobroma cacao] gi|508702693|gb|EOX94589.1| Zinc
           finger C-x8-C-x5-C-x3-H type family protein isoform 1
           [Theobroma cacao]
          Length = 279

 Score =  246 bits (627), Expect = 3e-63
 Identities = 119/147 (80%), Positives = 133/147 (90%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+  KIQEHFEDF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQF+EEDQAAAAL A
Sbjct: 69  IDPHKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGRELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKVIGRELRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRER 442
               ++ G+RSRSRS SP    HRR++
Sbjct: 189 R---KFRGSRSRSRSASP---RHRRDK 209


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  245 bits (625), Expect = 5e-63
 Identities = 117/138 (84%), Positives = 131/138 (94%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+ RKIQEHFEDF+EDI+EEL KFGEIESLNVCDNLADHMIGNVYVQFKEE+QAAAAL A
Sbjct: 69  IDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP 415
           + +GR   +RSRSRS+SP
Sbjct: 189 SGYGR---SRSRSRSLSP 203


>ref|XP_006305464.1| hypothetical protein CARUB_v10009885mg [Capsella rubella]
           gi|482574175|gb|EOA38362.1| hypothetical protein
           CARUB_v10009885mg [Capsella rubella]
          Length = 296

 Score =  243 bits (619), Expect = 2e-62
 Identities = 117/147 (79%), Positives = 132/147 (89%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 362 NH-HGRYWGTRSRSRSVSPPQHHHRRE 439
              + R   +RSRSRS+SP    H+R+
Sbjct: 189 RRSYRRGSRSRSRSRSISP---RHKRD 212


>ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
           gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName:
           Full=Splicing factor U2af small subunit A; AltName:
           Full=U2 auxiliary factor 35 kDa subunit A; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           small subunit A; Short=U2 snRNP auxiliary factor small
           subunit A; AltName: Full=Zinc finger CCCH
           domain-containing protein 8; Short=AtC3H8
           gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity
           to gb|Y18349 U2 snRNP auxiliary factor, small subunit
           from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come
           from this gene [Arabidopsis thaliana]
           gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10
           [Arabidopsis thaliana]
           gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP
           auxiliary factor [Arabidopsis thaliana]
           gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary
           factor [Arabidopsis thaliana] gi|19699275|gb|AAL91249.1|
           At1g27650/T22C5_2 [Arabidopsis thaliana]
           gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary
           factor protein [Arabidopsis thaliana]
           gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary
           factor [Arabidopsis thaliana] gi|21689611|gb|AAM67427.1|
           At1g27650/T22C5_2 [Arabidopsis thaliana]
           gi|332192737|gb|AEE30858.1| splicing factor U2af small
           subunit A [Arabidopsis thaliana]
          Length = 296

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/139 (82%), Positives = 128/139 (92%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 362 NH-HGRYWGTRSRSRSVSP 415
              + R   +RSRSRS+SP
Sbjct: 189 RRSYRRGSRSRSRSRSISP 207


>ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
           lyrata] gi|297336583|gb|EFH67000.1| hypothetical protein
           ARALYDRAFT_472969 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/139 (82%), Positives = 128/139 (92%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 69  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 188

Query: 362 NH-HGRYWGTRSRSRSVSP 415
              + R   +RSRSRS+SP
Sbjct: 189 RRSYRRGSRSRSRSRSISP 207


>ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
           gi|332192738|gb|AEE30859.1| splicing factor U2af small
           subunit A [Arabidopsis thaliana]
          Length = 246

 Score =  241 bits (616), Expect = 6e-62
 Identities = 115/139 (82%), Positives = 128/139 (92%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++ RKIQEHFEDFFED++EEL KFGEIESLN+CDNLADHMIGNVYVQFKEEDQAAAAL A
Sbjct: 19  LDPRKIQEHFEDFFEDLFEELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQA 78

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK++ RELRRKLFG++
Sbjct: 79  LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLVSRELRRKLFGRY 138

Query: 362 NH-HGRYWGTRSRSRSVSP 415
              + R   +RSRSRS+SP
Sbjct: 139 RRSYRRGSRSRSRSRSISP 157


>ref|XP_006849930.1| hypothetical protein AMTR_s00022p00118880 [Amborella trichopoda]
           gi|548853528|gb|ERN11511.1| hypothetical protein
           AMTR_s00022p00118880 [Amborella trichopoda]
          Length = 284

 Score =  241 bits (615), Expect = 7e-62
 Identities = 119/146 (81%), Positives = 130/146 (89%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           +E +KIQEHFEDF+EDIYEEL KFGEIESLNVCDNLADHM+GNVYVQFKEE+QAAAAL A
Sbjct: 69  MEPQKIQEHFEDFYEDIYEELSKFGEIESLNVCDNLADHMVGNVYVQFKEEEQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           +Q R+YSGRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK IGRELRRKLFG++
Sbjct: 129 MQYRYYSGRPIIIDFSPVTDFREATCRQYEENNCNRGGYCNFMHVKQIGRELRRKLFGRN 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRE 439
               RY  +RSRSRSVSP    HRRE
Sbjct: 189 R---RYRRSRSRSRSVSP---GHRRE 208


>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
           lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
           ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  241 bits (615), Expect = 7e-62
 Identities = 118/148 (79%), Positives = 129/148 (87%), Gaps = 1/148 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++  KIQ+HFEDF+EDI+EEL KFGE+ESLNVCDNLADHMIGNVYV FKEED AAAAL A
Sbjct: 69  LDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVK I RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP-PQHHHRRER 442
               R  G+RSRSRS+SP  +  H RER
Sbjct: 189 RRSYRR-GSRSRSRSISPRRKREHSRER 215


>ref|NP_199096.1| Splicing factor U2af small subunit B [Arabidopsis thaliana]
           gi|42573547|ref|NP_974870.1| Splicing factor U2af small
           subunit B [Arabidopsis thaliana]
           gi|75334092|sp|Q9FMY5.1|U2AFB_ARATH RecName:
           Full=Splicing factor U2af small subunit B; AltName:
           Full=U2 auxiliary factor 35 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           small subunit B; Short=U2 snRNP auxiliary factor small
           subunit B; AltName: Full=Zinc finger CCCH
           domain-containing protein 60; Short=AtC3H60
           gi|10177285|dbj|BAB10638.1| U2 snRNP auxiliary factor,
           small subunit [Arabidopsis thaliana]
           gi|22531195|gb|AAM97101.1| U2 snRNP auxiliary factor
           small subunit [Arabidopsis thaliana]
           gi|23198022|gb|AAN15538.1| U2 snRNP auxiliary factor
           small subunit [Arabidopsis thaliana]
           gi|332007485|gb|AED94868.1| Splicing factor U2af small
           subunit B [Arabidopsis thaliana]
           gi|332007486|gb|AED94869.1| Splicing factor U2af small
           subunit B [Arabidopsis thaliana]
          Length = 283

 Score =  241 bits (615), Expect = 7e-62
 Identities = 118/148 (79%), Positives = 129/148 (87%), Gaps = 1/148 (0%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++  KIQ+HFEDF+EDI+EEL KFGE+ESLNVCDNLADHMIGNVYV FKEED AAAAL A
Sbjct: 69  LDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVK I RELRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP-PQHHHRRER 442
               R  G+RSRSRS+SP  +  H RER
Sbjct: 189 RRSYRR-GSRSRSRSISPRRKREHSRER 215


>ref|XP_002307825.1| U2 snRNP auxiliary factor small subunit family protein [Populus
           trichocarpa] gi|222857274|gb|EEE94821.1| U2 snRNP
           auxiliary factor small subunit family protein [Populus
           trichocarpa]
          Length = 272

 Score =  241 bits (614), Expect = 9e-62
 Identities = 118/150 (78%), Positives = 133/150 (88%), Gaps = 3/150 (2%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++  KIQEHFEDF+EDI+EEL KFGEIE+LNVCDNLADHMIGNVYVQFKEEDQAAAAL +
Sbjct: 69  LDPHKIQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFKEEDQAAAALQS 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQYEEN+CNRGGYCNFMHVK+IG++LRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKLIGKDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP---PQHHHRRER 442
                Y  +RSRSRSVSP    + + RRER
Sbjct: 189 R---GYRVSRSRSRSVSPRRRDRDYDRRER 215


>ref|XP_002458285.1| hypothetical protein SORBIDRAFT_03g030670 [Sorghum bicolor]
           gi|241930260|gb|EES03405.1| hypothetical protein
           SORBIDRAFT_03g030670 [Sorghum bicolor]
          Length = 288

 Score =  239 bits (609), Expect = 4e-61
 Identities = 118/147 (80%), Positives = 129/147 (87%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+ RK+QEHFEDF+EDIYEEL KFGEIE+LNVCDNLADHMIGNVYVQF+EEDQAAAA  A
Sbjct: 69  IDPRKMQEHFEDFYEDIYEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPI+ DFSPVTDFREATCRQYEENSCNRGGYCNFMHVK IGR+LR+K+FG  
Sbjct: 129 LQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKKIGRDLRKKMFG-- 186

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRER 442
            H+ R +  R RSRS SP   HHRRER
Sbjct: 187 -HYKRPY--RGRSRSPSP---HHRRER 207


>ref|XP_002300614.1| hypothetical protein POPTR_0002s00480g [Populus trichocarpa]
           gi|566155509|ref|XP_006386121.1| hypothetical protein
           POPTR_0002s00480g [Populus trichocarpa]
           gi|566155511|ref|XP_006386122.1| U2 snRNP auxiliary
           factor small subunit family protein [Populus
           trichocarpa] gi|222842340|gb|EEE79887.1| hypothetical
           protein POPTR_0002s00480g [Populus trichocarpa]
           gi|550343978|gb|ERP63918.1| hypothetical protein
           POPTR_0002s00480g [Populus trichocarpa]
           gi|550343979|gb|ERP63919.1| U2 snRNP auxiliary factor
           small subunit family protein [Populus trichocarpa]
          Length = 273

 Score =  239 bits (609), Expect = 4e-61
 Identities = 118/150 (78%), Positives = 132/150 (88%), Gaps = 3/150 (2%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           ++  KIQEHFE+F+EDI+EEL KFGEIESLNVCDNLADHMIGNVYV FKEEDQAAAAL A
Sbjct: 69  LDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPIIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVK+IGR+LRRKLFG++
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSP---PQHHHRRER 442
                Y  +RSRSRSVSP    + + RRER
Sbjct: 189 R---GYRVSRSRSRSVSPRKRERDYDRRER 215


>ref|XP_004969477.1| PREDICTED: splicing factor U2af small subunit B-like isoform X1
           [Setaria italica] gi|514779946|ref|XP_004969478.1|
           PREDICTED: splicing factor U2af small subunit B-like
           isoform X2 [Setaria italica]
           gi|514779950|ref|XP_004969479.1| PREDICTED: splicing
           factor U2af small subunit B-like isoform X3 [Setaria
           italica] gi|514779954|ref|XP_004969480.1| PREDICTED:
           splicing factor U2af small subunit B-like isoform X4
           [Setaria italica]
          Length = 293

 Score =  235 bits (600), Expect = 4e-60
 Identities = 113/147 (76%), Positives = 125/147 (85%)
 Frame = +2

Query: 2   IEARKIQEHFEDFFEDIYEELRKFGEIESLNVCDNLADHMIGNVYVQFKEEDQAAAALNA 181
           I+ RK+QEHFEDF+EDI+EEL KFGEIE+LNVCDNLADHMIGNVYVQF+EEDQAAAA  A
Sbjct: 69  IDPRKMQEHFEDFYEDIFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTA 128

Query: 182 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGRELRRKLFGKH 361
           LQGRFYSGRPI+ DFSPVTDFREATCRQYEENSCNRGGYCNFMHVK IGR+LR+KLFG++
Sbjct: 129 LQGRFYSGRPIVVDFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQIGRDLRKKLFGRY 188

Query: 362 NHHGRYWGTRSRSRSVSPPQHHHRRER 442
                    R RSRS SP     RR+R
Sbjct: 189 RR-----PHRGRSRSPSPVHRRERRDR 210