BLASTX nr result
ID: Rehmannia24_contig00013576
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00013576
(491 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein... 73 3e-11
ref|XP_004243807.1| PREDICTED: putative F-box/LRR-repeat protein... 68 1e-09
ref|XP_006357504.1| PREDICTED: putative F-box/LRR-repeat protein... 64 2e-08
gb|AGO67237.1| f-box family protein [Silene vulgaris] 63 5e-08
ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g0303... 63 5e-08
ref|XP_006357510.1| PREDICTED: putative F-box protein At1g49610-... 62 8e-08
ref|XP_006357508.1| PREDICTED: putative F-box protein At1g49610-... 62 8e-08
ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g1409... 61 2e-07
gb|ACZ74679.1| cyclin-like F-box [Phaseolus vulgaris] 59 5e-07
ref|XP_006357505.1| PREDICTED: putative F-box/LRR-repeat protein... 58 1e-06
ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, part... 57 2e-06
ref|XP_006392158.1| hypothetical protein EUTSA_v10023862mg, part... 56 4e-06
ref|XP_002316908.2| hypothetical protein POPTR_0011s12210g [Popu... 56 4e-06
gb|EOY12496.1| Uncharacterized protein TCM_030985 [Theobroma cacao] 56 4e-06
ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein... 56 6e-06
emb|CBI23317.3| unnamed protein product [Vitis vinifera] 56 6e-06
emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera] 56 6e-06
ref|XP_006357506.1| PREDICTED: putative F-box/LRR-repeat protein... 55 7e-06
gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, pu... 55 7e-06
gb|EMJ15691.1| hypothetical protein PRUPE_ppa020362mg [Prunus pe... 55 7e-06
>ref|XP_004143230.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like
[Cucumis sativus] gi|449503744|ref|XP_004162155.1|
PREDICTED: putative F-box/LRR-repeat protein
At3g18150-like [Cucumis sativus]
Length = 512
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/106 (36%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Frame = -2
Query: 388 KRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCVYH 209
KR +T E D+I+ LP+ +LV ILS+LP RDA++ L+ RF LW + L D C YH
Sbjct: 6 KRTRTEEDRNDWISQLPESVLVDILSYLPTRDAVKMALISRFRNLWTYIHHLSFDECAYH 65
Query: 208 E----DDDDVEICDY-EKLMHIAHKVWNHHDNNTLDKLRLRFAFAL 86
+ D ++ + Y E+ +++ V H+ +D+ L+FAF L
Sbjct: 66 DHNIYDGENYDGPHYDERFLNLIRHVLILHERTIIDEFHLKFAFNL 111
>ref|XP_004243807.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like
[Solanum lycopersicum]
Length = 502
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Frame = -2
Query: 376 TCEVNKDFINDLPDLILVHILSFLPLRDAIRTV--LLPRFGKLWLSMPVLDLDNCVYHED 203
+C +N+D ++ LPD IL+HILS LPL+DA++ + RF KLW + L+ D C++ E
Sbjct: 9 SCVLNEDHLSGLPDDILIHILSLLPLKDAVKGICNASRRFHKLWPFIHTLNFDQCMFPEH 68
Query: 202 DDDVEICDY----------EKLMHIAHKVWNHHDNNTLDKLRLRFAFALTYLNTESALDH 53
D C+Y E +H V + T+ K L+F F L+Y + +
Sbjct: 69 D-----CNYYLEASRPDYDESFLHSVRHVLLRSKSPTILKFCLKFHFRLSYSFWQRISNS 123
Query: 52 LDVGAFERQELEKEKA 5
D+ ++ EK A
Sbjct: 124 TDIRLYDFLRSEKRMA 139
>ref|XP_006357504.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
X1 [Solanum tuberosum]
Length = 493
Score = 64.3 bits (155), Expect = 2e-08
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Frame = -2
Query: 379 KTCEVNKDFINDLPDLILVHILSFLPLRDAIRTV--LLPRFGKLWLSMPVLDLDNCVYHE 206
++C +N+D ++ LPD IL+HILS LPL+DA++ + RF KLW + L+ D ++ E
Sbjct: 8 RSCVLNEDRLSGLPDDILIHILSLLPLKDAVKGICNASRRFHKLWPFIHTLNFDQYMFPE 67
Query: 205 DDDDVEICDY----------EKLMHIAHKVWNHHDNNTLDKLRLRFAFALTY 80
D CDY E+ +H V + T+ K L+F F L+Y
Sbjct: 68 HD-----CDYYLEAGRPDYDERFVHSVRHVLLRSKSPTIHKFCLKFHFRLSY 114
>gb|AGO67237.1| f-box family protein [Silene vulgaris]
Length = 456
Score = 62.8 bits (151), Expect = 5e-08
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Frame = -2
Query: 388 KRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCVY- 212
KRL + ++D +++LPD ++V ILS++P+ DA+RTVLL RFG LW + L D Y
Sbjct: 7 KRLCLSKEDRDRLSELPDTVIVRILSYMPIIDAVRTVLLRRFGNLWTLVDTLKFDEDTYD 66
Query: 211 HEDDDDVEICDYEKLMHIAHKVWNHHDNNTLDKLRLRFAF 92
++D D EI + V H N ++ L F
Sbjct: 67 YKDHDCNEIKRVDWYCCFVRNVLMLHQNPSIHTFHLCIEF 106
>ref|XP_004300788.1| PREDICTED: F-box/LRR-repeat protein At3g03030-like [Fragaria vesca
subsp. vesca]
Length = 169
Score = 62.8 bits (151), Expect = 5e-08
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Frame = -2
Query: 424 SSNEEQETGWSPKRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWL 248
S+++ ++ + KRLK C ++D I+ LPD IL HILSFL R+A++T VL R+ +W
Sbjct: 3 SNSKRLKSCSNSKRLKPCSNHEDRISGLPDEILCHILSFLFTREAVKTSVLSHRWTNVWT 62
Query: 247 SMPVLDLDNCVYHED 203
S+P+LDLD +H D
Sbjct: 63 SVPILDLDEEEFHID 77
>ref|XP_006357510.1| PREDICTED: putative F-box protein At1g49610-like isoform X3
[Solanum tuberosum]
Length = 500
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Frame = -2
Query: 379 KTCEVNKDFINDLPDLILVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCVYHEDD 200
++C N+D + LPD IL++ILS LP +D + T+L+ RF LW + L+ D C++
Sbjct: 8 RSCVFNEDRFSGLPDAILIYILSLLPSKDVVNTMLIRRFHHLWPFIQTLNFDQCMW---- 63
Query: 199 DDVEICDY----------EKLMHIAHKVWNHHDNNTLDKLRLRFAFALTYLNTESALDHL 50
ICD EK ++ V H T+ K L+F F Y +
Sbjct: 64 -PGHICDCYARASRPIYDEKYVNFVRHVLLLHKGPTIHKFCLKFHFRSFYEFWQRTSGRT 122
Query: 49 DVGAFERQELEKEKA 5
D+ ++ EK A
Sbjct: 123 DIWHYDFLRSEKRMA 137
>ref|XP_006357508.1| PREDICTED: putative F-box protein At1g49610-like isoform X1
[Solanum tuberosum] gi|565382355|ref|XP_006357509.1|
PREDICTED: putative F-box protein At1g49610-like isoform
X2 [Solanum tuberosum]
Length = 560
Score = 62.0 bits (149), Expect = 8e-08
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Frame = -2
Query: 379 KTCEVNKDFINDLPDLILVHILSFLPLRDAIRTVLLPRFGKLWLSMPVLDLDNCVYHEDD 200
++C N+D + LPD IL++ILS LP +D + T+L+ RF LW + L+ D C++
Sbjct: 8 RSCVFNEDRFSGLPDAILIYILSLLPSKDVVNTMLIRRFHHLWPFIQTLNFDQCMW---- 63
Query: 199 DDVEICDY----------EKLMHIAHKVWNHHDNNTLDKLRLRFAFALTYLNTESALDHL 50
ICD EK ++ V H T+ K L+F F Y +
Sbjct: 64 -PGHICDCYARASRPIYDEKYVNFVRHVLLLHKGPTIHKFCLKFHFRSFYEFWQRTSGRT 122
Query: 49 DVGAFERQELEKEKA 5
D+ ++ EK A
Sbjct: 123 DIWHYDFLRSEKRMA 137
>ref|XP_004298789.1| PREDICTED: F-box/LRR-repeat protein At4g14096-like [Fragaria vesca
subsp. vesca]
Length = 516
Score = 60.8 bits (146), Expect = 2e-07
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = -2
Query: 424 SSNEEQETGWSPKRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWL 248
S+++ ++ RLK C N+D I+ +PD +L HILSFL R+A++T VL R+ +W
Sbjct: 3 SNSKRRKMASYSNRLKLCSDNEDRISGMPDAVLCHILSFLSTREAVKTSVLSHRWNNVWA 62
Query: 247 SMPVLDLDNCVYHED 203
S+P++D+D Y D
Sbjct: 63 SVPIVDVDEEQYQLD 77
>gb|ACZ74679.1| cyclin-like F-box [Phaseolus vulgaris]
Length = 402
Score = 59.3 bits (142), Expect = 5e-07
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = -2
Query: 358 DFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCVYHEDDDDVEIC 182
D I+ LPD IL +ILSFLP +D + T VL R+ LW S+P D D + D D+E+
Sbjct: 3 DIISCLPDSILCYILSFLPTKDVVTTSVLSKRWNLLWRSVPSFDFDLNTPYNLDYDIEME 62
Query: 181 DYEKLMHIAHKVWNHHD-NNTLDKLRLRFAFALTYLNTESALDHL--DVGAFERQELE 17
D+ + + A+ D + L +LR +F + + E ++ L G+ E LE
Sbjct: 63 DFSRFVRSANSFLRGRDMDQPLHRLRFICSFVYNFSSIERCIEDLLRISGSLEHLHLE 120
>ref|XP_006357505.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
X2 [Solanum tuberosum]
Length = 466
Score = 57.8 bits (138), Expect = 1e-06
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Frame = -2
Query: 379 KTCEVNKDFINDLPDLILVHILSFLPLRDAIRTV--LLPRFGKLWLSMPVLDLDNCVYHE 206
++C +N+D ++ LPD IL+HILS LPL+DA++ + RF KLW + L+ D ++ E
Sbjct: 8 RSCVLNEDRLSGLPDDILIHILSLLPLKDAVKGICNASRRFHKLWPFIHTLNFDQYMFPE 67
Query: 205 DDDDVEI----CDYEKLMHIAHKVWNHHDNNT 122
D D + DY++ +++ W N+T
Sbjct: 68 HDCDYYLEAGRPDYDE--RLSYSFWQRTSNST 97
>ref|XP_006301579.1| hypothetical protein CARUB_v10022017mg, partial [Capsella rubella]
gi|482570289|gb|EOA34477.1| hypothetical protein
CARUB_v10022017mg, partial [Capsella rubella]
Length = 292
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Frame = -2
Query: 382 LKTCEVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCVYHE 206
L+ +D I+ LPD IL+HILSF+P + AIRT VL R+ +W + P+L LDNC+
Sbjct: 16 LENKRAKRDVIDSLPDDILIHILSFVPTKFAIRTSVLSKRWRNIWCNTPLLYLDNCIVQP 75
Query: 205 DDDDVEICDY 176
D + Y
Sbjct: 76 SSIDESLNRY 85
>ref|XP_006392158.1| hypothetical protein EUTSA_v10023862mg, partial [Eutrema
salsugineum] gi|557088664|gb|ESQ29444.1| hypothetical
protein EUTSA_v10023862mg, partial [Eutrema salsugineum]
Length = 367
Score = 56.2 bits (134), Expect = 4e-06
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Frame = -2
Query: 403 TGWSPKRLKTCE-VNKDFINDLPDLILVHILSFLPLRDAIRTVLLP-RFGKLWLSMPVLD 230
T S +RL+ + ++D ++DLPD +L ILS L +D++RT LL R+ +WLS+PVLD
Sbjct: 8 TSLSKRRLRKSKGPSEDRLSDLPDELLCRILSELSTKDSVRTSLLSKRWRNIWLSVPVLD 67
Query: 229 LDNCVYHEDD 200
LD + +DD
Sbjct: 68 LDTRTFQDDD 77
>ref|XP_002316908.2| hypothetical protein POPTR_0011s12210g [Populus trichocarpa]
gi|550328213|gb|EEE97520.2| hypothetical protein
POPTR_0011s12210g [Populus trichocarpa]
Length = 486
Score = 56.2 bits (134), Expect = 4e-06
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = -2
Query: 388 KRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRTVLLPR-FGKLWLSMPVLDLDN 221
KR + EVNKD I+ LP++I+ HILSFLP +DA+ T +L + + +LW S+P D D+
Sbjct: 6 KRKRCEEVNKDMISSLPNVIIGHILSFLPTKDALCTCILSKSWRELWRSLPNFDFDD 62
>gb|EOY12496.1| Uncharacterized protein TCM_030985 [Theobroma cacao]
Length = 816
Score = 56.2 bits (134), Expect = 4e-06
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = -2
Query: 469 PLVPFRESQILTMDISSNEEQETGWSPKRLKTCEVNKDFINDLPDLILVHILSFLPLRDA 290
PL P R+ + T D + E++ I++LP+ +LVH LSFLP ++A
Sbjct: 15 PLSPIRQMSLETQDANKGEDR------------------ISNLPEDVLVHSLSFLPTKEA 56
Query: 289 IRT-VLLPRFGKLWLSMPVLDLDNCVY-HEDDDDVEICDYEKLMHIAHKVWNHHDNNTLD 116
IRT VL R+ LW+S+P L + +Y H + D V + + + HH N +
Sbjct: 57 IRTSVLSTRWQTLWMSLPNLTFTDLLYLHSNQDRVPELRASFMKLVDRSI--HHHNACIR 114
Query: 115 KLRL 104
KL L
Sbjct: 115 KLSL 118
>ref|XP_002271158.2| PREDICTED: putative F-box/LRR-repeat protein At3g18150-like [Vitis
vinifera]
Length = 665
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -2
Query: 370 EVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCVYHEDDDD 194
E D I++LPDL+LVHILSFLP+ AIRT VL RF W S P L D E DD
Sbjct: 31 ESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDSEWEIDDF 90
Query: 193 VEICDYEKLMH 161
+ + L+H
Sbjct: 91 ITFVNRALLLH 101
>emb|CBI23317.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -2
Query: 370 EVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCVYHEDDDD 194
E D I++LPDL+LVHILSFLP+ AIRT VL RF W S P L D E DD
Sbjct: 31 ESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDSEWEIDDF 90
Query: 193 VEICDYEKLMH 161
+ + L+H
Sbjct: 91 ITFVNRALLLH 101
>emb|CAN83117.1| hypothetical protein VITISV_017709 [Vitis vinifera]
Length = 526
Score = 55.8 bits (133), Expect = 6e-06
Identities = 34/71 (47%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -2
Query: 370 EVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWLSMPVLDLDNCVYHEDDDD 194
E D I++LPDL+LVHILSFLP+ AIRT VL RF W S P L D E DD
Sbjct: 31 ESRVDRISELPDLVLVHILSFLPMDAAIRTGVLSKRFAYKWASTPNLVFDQDSEWEIDDF 90
Query: 193 VEICDYEKLMH 161
+ + L+H
Sbjct: 91 ITFVNRALLLH 101
>ref|XP_006357506.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like isoform
X3 [Solanum tuberosum]
Length = 454
Score = 55.5 bits (132), Expect = 7e-06
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = -2
Query: 379 KTCEVNKDFINDLPDLILVHILSFLPLRDAIRTV--LLPRFGKLWLSMPVLDLDNCVYHE 206
++C +N+D ++ LPD IL+HILS LPL+DA++ + RF KLW + L+ D ++ E
Sbjct: 8 RSCVLNEDRLSGLPDDILIHILSLLPLKDAVKGICNASRRFHKLWPFIHTLNFDQYMFPE 67
Query: 205 DDDDVEICDY 176
D CDY
Sbjct: 68 HD-----CDY 72
>gb|EOY12921.1| F-box/RNI/FBD-like domains-containing protein, putative [Theobroma
cacao]
Length = 449
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = -2
Query: 424 SSNEEQETGWSPKRLKTCEVNKDFINDLPDLILVHILSFLPLRDAIRT-VLLPRFGKLWL 248
S+ +E ++L E D I+ LPD++L HILSFLP ++A+ T +L R+ LW
Sbjct: 4 SACQESNVSSKCQKLSDQETFLDRISQLPDVLLQHILSFLPTKEAMATSILSKRWLWLWT 63
Query: 247 SMPVLDLDNCVYHEDDDDV--EICDYEKLMHIAHKVWNHHDNNTLDKLRLRF 98
S+PVLDL++ ++ + + + + + + I +KV +LDK RL+F
Sbjct: 64 SVPVLDLEDSLFCKSNGKLRTDFIRFVTEVLILNKV------ASLDKFRLKF 109
>gb|EMJ15691.1| hypothetical protein PRUPE_ppa020362mg [Prunus persica]
Length = 439
Score = 55.5 bits (132), Expect = 7e-06
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Frame = -2
Query: 364 NKDFINDLPDLILVHILSFLPLRD-AIRTVLL-PRFGKLWLSMPVLDLD---NCVYHEDD 200
+KD+I++LPD +L ILSFLP A+RT +L R+ +W +P LDLD N YH
Sbjct: 3 DKDWISELPDALLCRILSFLPTTIWAVRTTILSKRWNNVWTCVPNLDLDCGGNFGYHH-- 60
Query: 199 DDVEICDYEKLMHIAHKVWNHHDNNTLDKLRLR 101
CD+++ +V D++ + K RLR
Sbjct: 61 -----CDHDRFAMFVDRVLCSRDSSDIKKFRLR 88