BLASTX nr result
ID: Rehmannia24_contig00013525
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00013525
(893 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago ... 68 4e-09
ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutr... 67 7e-09
gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus pe... 66 2e-08
gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus... 65 3e-08
ref|XP_004138110.1| PREDICTED: putative exosome complex componen... 65 3e-08
ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809... 65 3e-08
ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycin... 65 3e-08
ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana] g... 65 3e-08
ref|XP_002318044.1| exonuclease-related family protein [Populus ... 64 6e-08
ref|XP_002282635.1| PREDICTED: putative exosome complex componen... 64 6e-08
gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus... 64 8e-08
ref|XP_003518749.1| PREDICTED: putative exosome complex componen... 64 8e-08
ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arab... 64 8e-08
gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao] 63 1e-07
gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao] 63 1e-07
ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Caps... 63 1e-07
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr... 62 3e-07
ref|XP_004298940.1| PREDICTED: putative exosome complex componen... 62 3e-07
ref|XP_006476772.1| PREDICTED: putative exosome complex componen... 60 8e-07
gb|EOY20708.1| PNAS-3 related isoform 5 [Theobroma cacao] 60 1e-06
>ref|XP_003613959.1| Exosome complex exonuclease RRP40 [Medicago truncatula]
gi|217074508|gb|ACJ85614.1| unknown [Medicago
truncatula] gi|355515294|gb|AES96917.1| Exosome complex
exonuclease RRP40 [Medicago truncatula]
gi|388510130|gb|AFK43131.1| unknown [Medicago
truncatula]
Length = 240
Score = 68.2 bits (165), Expect = 4e-09
Identities = 32/46 (69%), Positives = 38/46 (82%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGDV 691
ME K + + ++F+DQ V PGDVV+DLS M NQTIKLGGGLRQDGDV
Sbjct: 1 MESKSAGSSTNFVDQLVYPGDVVLDLSTMTNQTIKLGGGLRQDGDV 46
>ref|XP_006412506.1| hypothetical protein EUTSA_v10026115mg [Eutrema salsugineum]
gi|557113676|gb|ESQ53959.1| hypothetical protein
EUTSA_v10026115mg [Eutrema salsugineum]
Length = 240
Score = 67.4 bits (163), Expect = 7e-09
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
M+ K S +P S IDQ V+PGDVV+DLS M NQTIKLG GLRQDGD
Sbjct: 1 MDTKVSVSPKSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLRQDGD 45
>gb|EMJ10724.1| hypothetical protein PRUPE_ppa010609mg [Prunus persica]
Length = 243
Score = 65.9 bits (159), Expect = 2e-08
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
M K + +P+SF+DQ V+PGDVV+DL+ M NQTIKLGGGLRQD D
Sbjct: 1 MAEKATGSPASFVDQSVVPGDVVLDLTSMANQTIKLGGGLRQDCD 45
>gb|ESW26341.1| hypothetical protein PHAVU_003G111100g [Phaseolus vulgaris]
Length = 240
Score = 65.5 bits (158), Expect = 3e-08
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME KPS+ ++ +DQ V PGDVV+DLS M NQTIKLGGGLRQD D
Sbjct: 1 METKPSSYSTNLVDQLVCPGDVVLDLSSMTNQTIKLGGGLRQDCD 45
>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
putative exosome complex component rrp40-like [Cucumis
sativus]
Length = 243
Score = 65.5 bits (158), Expect = 3e-08
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
M KPS++ S+ +DQ V+PGDVV+DLS M N+TIKLGGGLRQD D
Sbjct: 1 MVEKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQD 45
>ref|XP_006572879.1| PREDICTED: uncharacterized protein LOC100809941 isoform X1 [Glycine
max] gi|571433381|ref|XP_006572880.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X2 [Glycine
max] gi|571433383|ref|XP_006572881.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X3 [Glycine
max] gi|571433385|ref|XP_006572882.1| PREDICTED:
uncharacterized protein LOC100809941 isoform X4 [Glycine
max]
Length = 240
Score = 65.1 bits (157), Expect = 3e-08
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K +++ ++ +DQ V PGDVV+DLSKM+NQTIKLGGGLRQD D
Sbjct: 1 METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCD 45
>ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycine max]
gi|255636017|gb|ACU18353.1| unknown [Glycine max]
Length = 179
Score = 65.1 bits (157), Expect = 3e-08
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K +++ ++ +DQ V PGDVV+DLSKM+NQTIKLGGGLRQD D
Sbjct: 1 METKSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCD 45
>ref|NP_565592.1| PNAS-3 related protein [Arabidopsis thaliana]
gi|15010706|gb|AAK74012.1| At2g25350/F13B15.1
[Arabidopsis thaliana] gi|20197753|gb|AAM15233.1|
Expressed protein [Arabidopsis thaliana]
gi|20198061|gb|AAM15377.1| Expressed protein
[Arabidopsis thaliana] gi|23308267|gb|AAN18103.1|
At2g25350/F13B15.1 [Arabidopsis thaliana]
gi|330252599|gb|AEC07693.1| PNAS-3 related protein
[Arabidopsis thaliana]
Length = 241
Score = 65.1 bits (157), Expect = 3e-08
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGDV 691
M + ST+P+S IDQ V+PGDVV+DLS M NQTIKLG GLRQD +V
Sbjct: 1 MGTEVSTSPTSLIDQTVVPGDVVLDLSNMTNQTIKLGSGLRQDNEV 46
>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
gi|118482713|gb|ABK93275.1| unknown [Populus
trichocarpa] gi|222858717|gb|EEE96264.1|
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 64.3 bits (155), Expect = 6e-08
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K S +P++FID V+PGDVV+DLS M NQTIKLG GLRQD D
Sbjct: 1 MESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCD 45
>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
product [Vitis vinifera]
Length = 237
Score = 64.3 bits (155), Expect = 6e-08
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = -3
Query: 807 TPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
TP+SF+DQ V+PGDVV+DLSKM NQTIKLGGGL QD D
Sbjct: 5 TPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCD 42
>gb|ESW29698.1| hypothetical protein PHAVU_002G091200g [Phaseolus vulgaris]
Length = 240
Score = 63.9 bits (154), Expect = 8e-08
Identities = 30/45 (66%), Positives = 36/45 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME KPS+ ++ +DQ V PGDV++DLS M NQTIKLGGGLRQD D
Sbjct: 1 METKPSSYFANLVDQLVCPGDVILDLSSMTNQTIKLGGGLRQDCD 45
>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Glycine max] gi|571439680|ref|XP_006574927.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Glycine max]
Length = 240
Score = 63.9 bits (154), Expect = 8e-08
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K S++ ++ +DQ V PGDV++DLS M NQTIKLGGGLRQD D
Sbjct: 1 METKSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCD 45
>ref|XP_002869291.1| hypothetical protein ARALYDRAFT_491516 [Arabidopsis lyrata subsp.
lyrata] gi|297315127|gb|EFH45550.1| hypothetical protein
ARALYDRAFT_491516 [Arabidopsis lyrata subsp. lyrata]
Length = 241
Score = 63.9 bits (154), Expect = 8e-08
Identities = 31/46 (67%), Positives = 35/46 (76%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGDV 691
M K S +P+S IDQ V+PGDVV+DLS M NQTIKLG GL QD DV
Sbjct: 1 MAAKVSVSPTSLIDQIVVPGDVVLDLSNMTNQTIKLGSGLHQDNDV 46
>gb|EOY20706.1| PNAS-3 related isoform 3 [Theobroma cacao]
Length = 230
Score = 63.2 bits (152), Expect = 1e-07
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K S +P S ID V+PGDVV+DLS M NQTI LGGGLRQD D
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCD 45
>gb|EOY20704.1| PNAS-3 related isoform 1 [Theobroma cacao]
Length = 240
Score = 63.2 bits (152), Expect = 1e-07
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME K S +P S ID V+PGDVV+DLS M NQTI LGGGLRQD D
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQDCD 45
>ref|XP_006294895.1| hypothetical protein CARUB_v10023945mg [Capsella rubella]
gi|482563603|gb|EOA27793.1| hypothetical protein
CARUB_v10023945mg [Capsella rubella]
Length = 241
Score = 63.2 bits (152), Expect = 1e-07
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
M + ST+P+S I Q V+PGDVV+DLS M NQTIKLG GLRQD D
Sbjct: 1 MSTEVSTSPTSLIGQTVVPGDVVLDLSNMTNQTIKLGSGLRQDND 45
>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gi|567894648|ref|XP_006439812.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542073|gb|ESR53051.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542074|gb|ESR53052.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 62.0 bits (149), Expect = 3e-07
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME KPSTT + +D+ V+PGDVV+DLS M NQTIKLGGGLRQ+ D
Sbjct: 1 MEAKPSTT--NLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECD 43
>ref|XP_004298940.1| PREDICTED: putative exosome complex component rrp40-like [Fragaria
vesca subsp. vesca]
Length = 241
Score = 62.0 bits (149), Expect = 3e-07
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = -3
Query: 804 PSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
P++F+DQ V+PGDVV+DL+ M NQTIKLGGGLRQD D
Sbjct: 6 PANFVDQSVVPGDVVLDLTNMANQTIKLGGGLRQDCD 42
>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Citrus sinensis] gi|568845839|ref|XP_006476773.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Citrus sinensis]
Length = 238
Score = 60.5 bits (145), Expect = 8e-07
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQDGD 694
ME KPST ++ +D+ V+PGDVV+DLS M NQTIKLGGGLRQ+ D
Sbjct: 1 MEAKPST--ANLVDKIVVPGDVVLDLSSMTNQTIKLGGGLRQECD 43
>gb|EOY20708.1| PNAS-3 related isoform 5 [Theobroma cacao]
Length = 201
Score = 59.7 bits (143), Expect = 1e-06
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -3
Query: 828 MEPKPSTTPSSFIDQQVLPGDVVMDLSKMVNQTIKLGGGLRQ 703
ME K S +P S ID V+PGDVV+DLS M NQTI LGGGLRQ
Sbjct: 1 MEKKQSGSPPSLIDSTVVPGDVVLDLSSMTNQTIMLGGGLRQ 42