BLASTX nr result

ID: Rehmannia24_contig00011878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00011878
         (693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581...   109   9e-22
ref|XP_006343447.1| PREDICTED: uncharacterized protein At4g02000...    98   2e-18
ref|XP_002526851.1| conserved hypothetical protein [Ricinus comm...    64   4e-08
gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus pe...    63   8e-08
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    62   2e-07
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    62   2e-07
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    62   2e-07
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    62   2e-07
ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [S...    60   6e-07
ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [S...    59   1e-06
gb|EEC79287.1| hypothetical protein OsI_20089 [Oryza sativa Indi...    58   3e-06
ref|XP_002440777.1| hypothetical protein SORBIDRAFT_09g006416 [S...    57   7e-06

>ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581842 [Solanum tuberosum]
          Length = 278

 Score =  109 bits (272), Expect = 9e-22
 Identities = 60/148 (40%), Positives = 87/148 (58%)
 Frame = -3

Query: 691 WIST*TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSESYWV 512
           W+S   G KIG       D++IPE+GS +G++I+    +N+ KPL RG  IKLGSE+ WV
Sbjct: 137 WMSMDVGRKIGNALGGIVDIVIPENGSKEGQYIRPKARMNITKPLPRGKLIKLGSETTWV 196

Query: 511 DFRYENLLGLCYYCGHIGHFERGCSIRKEDVQKGSVCEGQFLEWMKAKDGFVLTRKNFST 332
           +  YENL  +CYYCG +GH E+ C+ R +DVQ G+V   QF  W+KA++       + S 
Sbjct: 197 EISYENLPYVCYYCGLLGHNEKTCAHRAKDVQDGTVKTDQFGIWLKAEN-------HASF 249

Query: 331 SNKNSEDFPNQAEGKAVKVPSKSEFLVS 248
           S K+ +   N   G  V    + E +V+
Sbjct: 250 SEKHRQQGTNSTNGSPVVNGRRVERIVN 277


>ref|XP_006343447.1| PREDICTED: uncharacterized protein At4g02000-like [Solanum
           tuberosum]
          Length = 177

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 46/96 (47%), Positives = 67/96 (69%)
 Frame = -3

Query: 691 WIST*TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSESYWV 512
           W+S   G KIG       D++IP++GS +G++I+L   +N+ KPL RG  IKLGSE+ WV
Sbjct: 79  WMSMGIGRKIGNTLGGIVDIVIPKNGSKEGQYIRLKARMNITKPLPRGKLIKLGSETTWV 138

Query: 511 DFRYENLLGLCYYCGHIGHFERGCSIRKEDVQKGSV 404
           + RY+NL  +CYYCG +GH E+ C+ R +DV+ G+V
Sbjct: 139 EIRYKNLPYVCYYCGLLGHNEKTCTHRAKDVRHGTV 174


>ref|XP_002526851.1| conserved hypothetical protein [Ricinus communis]
           gi|223533750|gb|EEF35482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 335

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
 Frame = -3

Query: 601 RFIKLLVYVNLRKPLLRGTNIKLGS-ESYWVDFRYENLLGLCYYCGHIGHFERGCSIRKE 425
           R ++L + ++LRKPL + T I +GS +  WV FRYE L   CY CG +GH  R C  R E
Sbjct: 32  RSVRLRIRIDLRKPLRKRTKIAMGSNKDMWVFFRYERLPSFCYVCGCLGHVMRDCDSRTE 91

Query: 424 DVQKGSVCEG--QFLEWMKA 371
           D    ++ E    F +WM+A
Sbjct: 92  DDGYDAMDEKLLPFGDWMRA 111


>gb|EMJ25951.1| hypothetical protein PRUPE_ppa024202mg [Prunus persica]
          Length = 1106

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = -3

Query: 673 GLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGS-ESYWVDFRYE 497
           G +IG    +  D+   + G   GRF+++ V +++ KPL  GT I L S ++ WVDFRYE
Sbjct: 6   GRQIGNCMGECIDVTQRQEGECMGRFLRVCVKMDITKPLKWGTKISLPSGQTEWVDFRYE 65

Query: 496 NLLGLCYYCGHIGHFERGCSIRKEDVQKGSVCEGQFLEWMKAKDGFVLTRKNFSTSNKNS 317
            L   CY CG +G     C    +DV K S   G FL   +    FV   K +STS K +
Sbjct: 66  RLPNFCYNCGQVGRIMGDCMF-VDDVLK-SAPYGSFL---RVVHDFV---KPWSTSPKRA 117

Query: 316 EDF 308
            ++
Sbjct: 118 SNW 120


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSES--YWVDFR 503
           TG+ IG+   +   + + E GS  G+F+++ + +++RKPL+RG  + +G++    W    
Sbjct: 39  TGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLV 98

Query: 502 YENLLGLCYYCGHIGHFERGC 440
           YE L   CY CG +GH E+ C
Sbjct: 99  YEFLPDFCYICGIVGHTEKLC 119


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSES--YWVDFR 503
           TG+ IG+   +   + + E GS  G+F+++ + +++RKPL+RG  + +G++    W    
Sbjct: 108 TGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLV 167

Query: 502 YENLLGLCYYCGHIGHFERGC 440
           YE L   CY CG +GH E+ C
Sbjct: 168 YEFLPDFCYICGIVGHTEKLC 188


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSES--YWVDFR 503
           TG+ IG+   +   + + E GS  G+F+++ + +++RKPL+RG  + +G++    W    
Sbjct: 111 TGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLV 170

Query: 502 YENLLGLCYYCGHIGHFERGC 440
           YE L   CY CG +GH E+ C
Sbjct: 171 YEFLPDFCYICGIVGHTEKLC 191


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSES--YWVDFR 503
           TG+ IG+   +   + + E GS  G+F+++ + +++RKPL+RG  + +G++    W    
Sbjct: 104 TGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCPLV 163

Query: 502 YENLLGLCYYCGHIGHFERGC 440
           YE L   CY CG +GH E+ C
Sbjct: 164 YEFLPDFCYICGIVGHTEKLC 184


>ref|XP_002452061.1| hypothetical protein SORBIDRAFT_04g017843 [Sorghum bicolor]
           gi|241931892|gb|EES05037.1| hypothetical protein
           SORBIDRAFT_04g017843 [Sorghum bicolor]
          Length = 503

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
 Frame = -3

Query: 673 GLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGSESY----WVDF 506
           G  IG++  K  D+   E+G   G F+++ V +++RKPL+RG  + +G   +    W   
Sbjct: 58  GELIGEMVGKVLDVDADENGRAVGEFLRIKVRLDIRKPLMRGVTLDIGDGDHENNKWCPL 117

Query: 505 RYENLLGLCYYCGHIGHFERGCSIRKEDVQKGSVCEGQFLEWMKAKDGFVLTRKNFSTSN 326
            YE L   C+ CG IGH +R C    ++         QF   ++    F+  RK F   +
Sbjct: 118 VYEFLPDFCFICGLIGHVDRACPYYAQNRS-----SPQFSRALR----FIPERKRFGEES 168

Query: 325 KNSE-----DFPNQAEGKAVKVPSKSEFLVSMPSKE 233
           K+ +      F    E    ++  K+   V    KE
Sbjct: 169 KDEKAKKGLTFEETVEASVKEITDKARGGVVAVDKE 204


>ref|XP_002467743.1| hypothetical protein SORBIDRAFT_01g033270 [Sorghum bicolor]
           gi|241921597|gb|EER94741.1| hypothetical protein
           SORBIDRAFT_01g033270 [Sorghum bicolor]
          Length = 542

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = -3

Query: 673 GLKIGK-LFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKL--GSESYWVDFR 503
           G +IG+ L + T+D      GS  G F+++ V +++RKPL+RG  ++   G +  W   R
Sbjct: 4   GNRIGRALAVDTED-----DGSAVGGFLRIKVKIDIRKPLMRGILLERAEGEDDCWCPIR 58

Query: 502 YENLLGLCYYCGHIGHFERGCSIRKEDVQKGSVCEGQFLEWMK 374
           YE L   CY CG +GH E+ C    E+     V   QF +W++
Sbjct: 59  YEYLPNFCYGCGLLGHVEKECDSCVEE----EVGFKQFGDWLR 97


>gb|EEC79287.1| hypothetical protein OsI_20089 [Oryza sativa Indica Group]
          Length = 892

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIK--LGSESYWVDFR 503
           TG  IG    K  ++   E GS  G ++++ V ++ RK L+RG  ++   G +  W   +
Sbjct: 69  TGRLIGNKIGKALEVDTDEDGSAVGGYLRVKVLMDARKALIRGVMMEGVAGEKENWCGVK 128

Query: 502 YENLLGLCYYCGHIGHFERGCSIRKEDVQKG 410
           YE L   CY CG +GH E     RK  V+KG
Sbjct: 129 YEFLPNFCYSCGVLGHVEECDDKRKSGVEKG 159


>ref|XP_002440777.1| hypothetical protein SORBIDRAFT_09g006416 [Sorghum bicolor]
           gi|241946062|gb|EES19207.1| hypothetical protein
           SORBIDRAFT_09g006416 [Sorghum bicolor]
          Length = 125

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
 Frame = -3

Query: 676 TGLKIGKLFLKTQDLMIPESGSPKGRFIKLLVYVNLRKPLLRGTNIKLGS--ESYWVDFR 503
           TG  +G+     +++ I       GR +++ V +++R+PL+RG  +K+G+     W  F 
Sbjct: 15  TGETLGEKIGVFKEVDIGLDAIAVGRVLRIKVLIDIRRPLMRGITVKVGNPEREKWCSFA 74

Query: 502 YENLLGLCYYCGHIGHFERGCSIRKE 425
           YE L   C+ CG +GH ++ CS+ +E
Sbjct: 75  YEFLPDSCHTCGLVGHTDKQCSLPRE 100


Top