BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00009360
         (1884 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352367.1| PREDICTED: transcription initiation factor I...   572   e-160
ref|XP_006352364.1| PREDICTED: transcription initiation factor I...   572   e-160
ref|XP_002262798.2| PREDICTED: transcription initiation factor I...   565   e-158
emb|CBI33123.3| unnamed protein product [Vitis vinifera]              565   e-158
ref|XP_004250258.1| PREDICTED: transcription initiation factor I...   565   e-158
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   555   e-155
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   552   e-154
ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   550   e-154
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   544   e-152
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   542   e-151
gb|EOY28869.1| Transcription activators,DNA binding,RNA polymera...   538   e-150
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   528   e-147
ref|XP_004486214.1| PREDICTED: transcription initiation factor I...   522   e-145
gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus...   521   e-145
gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus...   518   e-144
gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus pe...   517   e-144
ref|XP_003594206.1| Transcription initiation factor IIF subunit ...   513   e-142
ref|XP_004152016.1| PREDICTED: transcription initiation factor I...   505   e-140
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|...   500   e-139
ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [A...   499   e-138

>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X4 [Solanum tuberosum]
          Length = 535

 Score =  572 bits (1474), Expect = e-160
 Identities = 314/520 (60%), Positives = 343/520 (65%), Gaps = 4/520 (0%)
 Frame = +2

Query: 8    ELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFAT 187
            +LYGS+CKHLTLC++CGK MAE R KCYECG P+TRLIREYNVRACSS+DKN+FI RFA+
Sbjct: 19   DLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDKNHFIARFAS 78

Query: 188  GLPNF-KKKNENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQSA 364
            GLP F KKKN++KW LQKEGLQGRQVTD+LREKYKNKPWLLEDETGQFQ+HG LEG+QSA
Sbjct: 79   GLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLEDETGQFQFHGHLEGAQSA 138

Query: 365  TYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 544
             YYLLM+QG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN
Sbjct: 139  QYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 198

Query: 545  NGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXXXX 724
            NG AAFGEVE+ DDKE                DE NASD GDEDEEEEA+RKN       
Sbjct: 199  NGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLNKR 258

Query: 725  XXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 904
                                      WEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI
Sbjct: 259  GIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 318

Query: 905  KQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISPVLAPK- 1081
            KQ                           +ANGLN                ISPVLAPK 
Sbjct: 319  KQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDTEEDISPVLAPKP 378

Query: 1082 KEAPKEEPVD-NSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKTENE 1258
            KEAPKEEPV+ NSPL                              T +GAPLKKVKTE +
Sbjct: 379  KEAPKEEPVETNSPLKPAASGSNRGTPTSKSAKTKRKANGDESKPT-SGAPLKKVKTETD 437

Query: 1259 VKSVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTTQDLVA 1438
             K  KDE  SS K+S                      VTEDEIR VLLQ+ PVTTQDLV+
Sbjct: 438  AKPGKDETPSSAKNS--ALPKGASSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVS 495

Query: 1439 KFKSRLKLKEDKDAFAAILRRISKIQK-TNGANYVVLRER 1555
            +FKSRLK KEDK AFA +LR+ISKIQK T G++YVVLRER
Sbjct: 496  QFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 535


>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Solanum tuberosum]
            gi|565371548|ref|XP_006352365.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Solanum tuberosum] gi|565371550|ref|XP_006352366.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like isoform X3 [Solanum tuberosum]
          Length = 538

 Score =  572 bits (1474), Expect = e-160
 Identities = 314/520 (60%), Positives = 343/520 (65%), Gaps = 4/520 (0%)
 Frame = +2

Query: 8    ELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFAT 187
            +LYGS+CKHLTLC++CGK MAE R KCYECG P+TRLIREYNVRACSS+DKN+FI RFA+
Sbjct: 19   DLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDKNHFIARFAS 78

Query: 188  GLPNF-KKKNENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQSA 364
            GLP F KKKN++KW LQKEGLQGRQVTD+LREKYKNKPWLLEDETGQFQ+HG LEG+QSA
Sbjct: 79   GLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLEDETGQFQFHGHLEGAQSA 138

Query: 365  TYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 544
             YYLLM+QG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN
Sbjct: 139  QYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 198

Query: 545  NGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXXXX 724
            NG AAFGEVE+ DDKE                DE NASD GDEDEEEEA+RKN       
Sbjct: 199  NGPAAFGEVERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLNKR 258

Query: 725  XXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 904
                                      WEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI
Sbjct: 259  GIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 318

Query: 905  KQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISPVLAPK- 1081
            KQ                           +ANGLN                ISPVLAPK 
Sbjct: 319  KQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDTEEDISPVLAPKP 378

Query: 1082 KEAPKEEPVD-NSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKTENE 1258
            KEAPKEEPV+ NSPL                              T +GAPLKKVKTE +
Sbjct: 379  KEAPKEEPVETNSPLKPAASGSNRGTPTSKSAKTKRKANGDESKPT-SGAPLKKVKTETD 437

Query: 1259 VKSVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTTQDLVA 1438
             K  KDE  SS K+S                      VTEDEIR VLLQ+ PVTTQDLV+
Sbjct: 438  AKPGKDETPSSAKNS--ALPKGASSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVS 495

Query: 1439 KFKSRLKLKEDKDAFAAILRRISKIQK-TNGANYVVLRER 1555
            +FKSRLK KEDK AFA +LR+ISKIQK T G++YVVLRER
Sbjct: 496  QFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 535


>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Vitis vinifera]
          Length = 534

 Score =  565 bits (1457), Expect = e-158
 Identities = 311/525 (59%), Positives = 339/525 (64%), Gaps = 7/525 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC++CGKTMAEN  KCY+CG P+TRLIREYNVR  SS DKNYFIGRF
Sbjct: 12   TTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNSSGDKNYFIGRF 71

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP F KK   +NKW+L KEGLQGRQV+D+LREKYKNKPWLLEDETGQ+QYHGQLEGS
Sbjct: 72   VTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETGQYQYHGQLEGS 131

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRR+TADGYQRWMMK
Sbjct: 132  QSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMK 191

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXD--EANASDRGDEDEEEEASRKNXX 709
            AANNG AAFGEVEK DDKE+               D  E N SD+ +EDEEEEA RKN  
Sbjct: 192  AANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRL 251

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIP 889
                                           WEHEEIFTDDDEAVGNDPEEREDLAPE+P
Sbjct: 252  GLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVP 311

Query: 890  APPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN-XXXXXXXXXXXXXXXXISP 1066
            APPEIKQ                           +A G+N                 +SP
Sbjct: 312  APPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSP 371

Query: 1067 VLAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
            VLAPK K+ PKEEP DNSP+                              T NG P KKV
Sbjct: 372  VLAPKQKDVPKEEPADNSPM-KSATASARSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKV 430

Query: 1244 KTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            KTENE K S KDE  S +K +  T                   VTEDEIR VLLQK PVT
Sbjct: 431  KTENESKSSAKDEGPSPSKVTA-TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVT 489

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TQDLVAKFK+RLK +EDK AFA ILRRISKIQKTNG NYVVLR++
Sbjct: 490  TQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 534


>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  565 bits (1457), Expect = e-158
 Identities = 311/525 (59%), Positives = 339/525 (64%), Gaps = 7/525 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC++CGKTMAEN  KCY+CG P+TRLIREYNVR  SS DKNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLSCGKTMAENHGKCYDCGTPVTRLIREYNVRTNSSGDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP F KK   +NKW+L KEGLQGRQV+D+LREKYKNKPWLLEDETGQ+QYHGQLEGS
Sbjct: 77   VTGLPGFSKKKNADNKWSLHKEGLQGRQVSDALREKYKNKPWLLEDETGQYQYHGQLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRR+TADGYQRWMMK
Sbjct: 137  QSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRRTADGYQRWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXD--EANASDRGDEDEEEEASRKNXX 709
            AANNG AAFGEVEK DDKE+               D  E N SD+ +EDEEEEA RKN  
Sbjct: 197  AANNGPAAFGEVEKLDDKETGGAAGGGRGRKKQTGDEEEGNVSDKAEEDEEEEAERKNRL 256

Query: 710  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIP 889
                                           WEHEEIFTDDDEAVGNDPEEREDLAPE+P
Sbjct: 257  GLNKRSGDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVP 316

Query: 890  APPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN-XXXXXXXXXXXXXXXXISP 1066
            APPEIKQ                           +A G+N                 +SP
Sbjct: 317  APPEIKQDEEDEDDSNEEEGGLSKSGKELKKLLGKAAGMNDSDAEDDDDDEEEDEIGLSP 376

Query: 1067 VLAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
            VLAPK K+ PKEEP DNSP+                              T NG P KKV
Sbjct: 377  VLAPKQKDVPKEEPADNSPM-KSATASARSTPPTSKSSKGKRKSNGDDMKTTNGGPPKKV 435

Query: 1244 KTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            KTENE K S KDE  S +K +  T                   VTEDEIR VLLQK PVT
Sbjct: 436  KTENESKSSAKDEGPSPSKVTA-TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVT 494

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TQDLVAKFK+RLK +EDK AFA ILRRISKIQKTNG NYVVLR++
Sbjct: 495  TQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRDK 539


>ref|XP_004250258.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Solanum lycopersicum]
          Length = 534

 Score =  565 bits (1455), Expect = e-158
 Identities = 312/520 (60%), Positives = 343/520 (65%), Gaps = 4/520 (0%)
 Frame = +2

Query: 8    ELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFAT 187
            +LYGS+CKHLTLC++CGK MAE R KCYECG P+TRLIREYNVRACSS+DKN+FI RFA+
Sbjct: 19   DLYGSSCKHLTLCLSCGKNMAETRDKCYECGTPVTRLIREYNVRACSSNDKNHFIARFAS 78

Query: 188  GLPNF-KKKNENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQSA 364
            GLP F KKKN++KW LQKEGLQGRQVTD+LREKYKNKPWLLEDETGQFQ+HG LEG+QSA
Sbjct: 79   GLPKFSKKKNDSKWTLQKEGLQGRQVTDTLREKYKNKPWLLEDETGQFQFHGHLEGAQSA 138

Query: 365  TYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 544
             YYLLM+QG+E  AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN
Sbjct: 139  QYYLLMMQGEELFAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAAN 198

Query: 545  NGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXXXX 724
            NG AAFGE+E+ DDKE                DE NASD GDEDEEEEA+RKN       
Sbjct: 199  NGPAAFGELERFDDKEGGSGGTRGRKKTSGDEDEGNASDHGDEDEEEEAARKNRLGLNKR 258

Query: 725  XXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 904
                                      WEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI
Sbjct: 259  GIDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEI 318

Query: 905  KQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISPVLAPK- 1081
            KQ                           +ANGLN                ISPVLAPK 
Sbjct: 319  KQDEDDEEEGEEEGGGLSKSGKELKKLLGKANGLN-ESDEDDDDDDDTEEDISPVLAPKP 377

Query: 1082 KEAPKEEPVD-NSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKTENE 1258
            KEAPKEEPV+ NSPL                              T +GAPLKKVKTE +
Sbjct: 378  KEAPKEEPVETNSPLKAAASGSNRGTPTSKSAKTKRKANGDESKPT-SGAPLKKVKTEAD 436

Query: 1259 VKSVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTTQDLVA 1438
             K  KDE  SS K++                      VTEDEIR VLLQ+ PVTTQDLV+
Sbjct: 437  AKPGKDETPSSAKNT--ALPKGASSSSKTAPSSATGPVTEDEIRAVLLQRKPVTTQDLVS 494

Query: 1439 KFKSRLKLKEDKDAFAAILRRISKIQK-TNGANYVVLRER 1555
            +FKSRLK KEDK AFA +LR+ISKIQK T G++YVVLRER
Sbjct: 495  QFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLRER 534


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  555 bits (1429), Expect = e-155
 Identities = 307/523 (58%), Positives = 340/523 (65%), Gaps = 5/523 (0%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC++CGKTMAEN AKC++CG  ++RLIREYNVRA SSSDKNYFIGRF
Sbjct: 18   TTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNVRASSSSDKNYFIGRF 77

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKW+LQKEGLQGRQ+TD+LREKYKN+PWLLEDETGQFQY G LEGS
Sbjct: 78   VTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLEDETGQFQYQGHLEGS 137

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLL+LQGKEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+NRRKTADGY+RWMMK
Sbjct: 138  QSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMRNRRKTADGYERWMMK 197

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNG AAFGEVEK DDK+S               +E N SDRGDEDEEEEA+RKN    
Sbjct: 198  AANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGDEDEEEEAARKNRLGL 257

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGND EEREDLAPE+PAP
Sbjct: 258  NKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGNDREEREDLAPEVPAP 317

Query: 896  PEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN--XXXXXXXXXXXXXXXXISPV 1069
            PEIKQ                           RA GLN                  ISPV
Sbjct: 318  PEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDDDDDDDMDEDVSISPV 376

Query: 1070 LAPKKEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKT 1249
            LAP K+ PKEEP DNSP                                 N AP KKVKT
Sbjct: 377  LAP-KQTPKEEPADNSPAKPMTSASSKGTPSTSKSAKGKRKLNSDEAKQTNVAPQKKVKT 435

Query: 1250 ENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTTQ 1426
            ENE+K +VK+E A ++KSS                      VTE+EIR VLLQ  PVTTQ
Sbjct: 436  ENELKPTVKEESAPTSKSSA-----TPKAAPPSAKTGSTSPVTEEEIRAVLLQNGPVTTQ 490

Query: 1427 DLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            DLVA+FKSRLK  EDK AFA ILRRISKIQKT+G++YVVLR++
Sbjct: 491  DLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRDK 533


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  552 bits (1422), Expect = e-154
 Identities = 306/526 (58%), Positives = 338/526 (64%), Gaps = 9/526 (1%)
 Frame = +2

Query: 5    VELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFA 184
            V+LYGS CKH+TLC+ CGKTMAEN+AKC++CG  +TRLIREYNVR  +SSDKNYFIGRF 
Sbjct: 18   VDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNVRPSNSSDKNYFIGRFV 77

Query: 185  TGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQ 358
            +GLP+F KK   ENKW L K+GLQGRQVTD+LREKYKNKPW+LEDETGQ QY G LEGSQ
Sbjct: 78   SGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLEDETGQAQYQGHLEGSQ 137

Query: 359  SATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKA 538
            SATYYLL++  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGY+RWMMKA
Sbjct: 138  SATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKA 197

Query: 539  ANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXX 718
            ANNGAAAFGEVEK DDKES               DE N SDRG+EDE+EEA RKN     
Sbjct: 198  ANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLN 257

Query: 719  XXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPP 898
                                        WEHEEIFTDDDEAVGNDPEEREDLAPE+PAPP
Sbjct: 258  KRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPP 317

Query: 899  EIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN---XXXXXXXXXXXXXXXXISPV 1069
            EIKQ                           RANGLN                    SP+
Sbjct: 318  EIKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAEDDDDEDDDMEDEVGFSPI 375

Query: 1070 LAPK-KEAP-KEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
            LAPK K+ P KEEP DNSP                                P+GAPLKKV
Sbjct: 376  LAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKSNGDDARAPSGAPLKKV 435

Query: 1244 KTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            KTENE K S +DE  S++KSS P                    VT +EIR VLLQ+ PVT
Sbjct: 436  KTENETKSSARDENVSASKSSAPA---KGASSSRTGSTSASGPVTAEEIRAVLLQQAPVT 492

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNG-ANYVVLRER 1555
            TQDLVAKFK RL+  ED+ AFA IL+RISKIQKTNG +NYVVLRE+
Sbjct: 493  TQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLREK 538


>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis]
          Length = 538

 Score =  550 bits (1418), Expect = e-154
 Identities = 305/525 (58%), Positives = 337/525 (64%), Gaps = 9/525 (1%)
 Frame = +2

Query: 8    ELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFAT 187
            +LYGS CKH+TLC+ CGKTMAEN+AKC++CG  +TRLIREYNVR  +SSDKNYFIGRF +
Sbjct: 19   DLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYNVRPSNSSDKNYFIGRFVS 78

Query: 188  GLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQS 361
            GLP+F KK   ENKW L K+GLQGRQVTD+LREKYKNKPW+LEDETGQ QY G LEGSQS
Sbjct: 79   GLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWMLEDETGQAQYQGHLEGSQS 138

Query: 362  ATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAA 541
            ATYYLL++  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGY+RWMMKAA
Sbjct: 139  ATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMKAA 198

Query: 542  NNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXXX 721
            NNGAAAFGEVEK DDKES               DE N SDRG+EDE+EEA RKN      
Sbjct: 199  NNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRGEEDEDEEAKRKNRLGLNK 258

Query: 722  XXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPE 901
                                       WEHEEIFTDDDEAVGNDPEEREDLAPE+PAPPE
Sbjct: 259  RGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAPPE 318

Query: 902  IKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN---XXXXXXXXXXXXXXXXISPVL 1072
            IKQ                           RANGLN                    SP+L
Sbjct: 319  IKQ--DEEDEDEEEEGGLSKSGKELKKLLGRANGLNESDAEDDDDEDDDMEDEVGFSPIL 376

Query: 1073 APK-KEAP-KEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVK 1246
            APK K+ P KEEP DNSP                                P+GAPLKKVK
Sbjct: 377  APKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKSNGDDARAPSGAPLKKVK 436

Query: 1247 TENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTT 1423
            TENE K S +DE  S++KSS P                    VT +EIR VLLQ+ PVTT
Sbjct: 437  TENETKSSARDENVSASKSSAPA---KGASSSRTGSTSASGPVTAEEIRAVLLQQAPVTT 493

Query: 1424 QDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNG-ANYVVLRER 1555
            QDLVAKFK RL+  ED+ AFA IL+RISKIQKTNG +NYVVLRE+
Sbjct: 494  QDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLREK 538


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  544 bits (1402), Expect = e-152
 Identities = 300/526 (57%), Positives = 338/526 (64%), Gaps = 8/526 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC+ CGKTMAENR KC++CG  +TRLIREYNVRA +SS+KNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYNVRASTSSEKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP F KK   ENKW+L KEG+ GRQ+TD+LREK+KNKPWLLEDETGQFQY G LEGS
Sbjct: 77   VTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLLEDETGQFQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWM 529
            QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEEKMKNRRKTADGY+RWM
Sbjct: 137  QSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWM 196

Query: 530  MKAANNGAAAFGEVEKSDDKES-XXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNX 706
            MKAA+NGAAAFGEVEK DDK+                 DE N SD+G+EDEEEEA RK+ 
Sbjct: 197  MKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDKGEEDEEEEAGRKSR 256

Query: 707  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEI 886
                                            WEHEEIFTDDDEAV  DPEEREDLAPE+
Sbjct: 257  LGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAPEV 316

Query: 887  PAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISP 1066
            PAPPEIKQ                           +ANGLN                ISP
Sbjct: 317  PAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDMDDDISP 375

Query: 1067 VLAPKKE--APKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKK 1240
            VLAPK++   PKEEP DNSP                               T NGAP+KK
Sbjct: 376  VLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAPVKK 435

Query: 1241 VKTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
            VKTENEVK +VK+E + +TK +  T                   VTE+EIR VLLQ  PV
Sbjct: 436  VKTENEVKPTVKEESSPATKGTA-TPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPV 494

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TTQDLVA+FKSRL+  EDK AFA ILRRISKIQKT+G+N+VVLR++
Sbjct: 495  TTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 540


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  542 bits (1397), Expect = e-151
 Identities = 301/526 (57%), Positives = 337/526 (64%), Gaps = 8/526 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC+NCGKTMAENR KC++CG  ++RLIREYNVRA +SSDKNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYNVRASTSSDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKW+L KEG+ GRQ+TD+LREK+KNKPWLLEDETGQ QY G LEGS
Sbjct: 77   VTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLLEDETGQSQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWM 529
            QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEEKMKNRRKTADGY+RWM
Sbjct: 137  QSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWM 196

Query: 530  MKAANNGAAAFGEVEKSDDKES-XXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNX 706
            MKAANNGAAAFGEVEK DDKE                 DE N SDRG+EDEEEEA RK+ 
Sbjct: 197  MKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVSDRGEEDEEEEAGRKSR 256

Query: 707  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEI 886
                                            WEHEEIFTDDDEAV  DPEEREDLAPE+
Sbjct: 257  LGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAPEV 316

Query: 887  PAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISP 1066
            PAPPEIKQ                           +ANGLN                ISP
Sbjct: 317  PAPPEIKQ-DEDDEDEENEEGGLSKSGKELKKLLGKANGLNESDVEDDDDDEDMDDDISP 375

Query: 1067 VLAPKKE--APKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKK 1240
            VLAPK++   PKEE  D SP                               + NGAP+KK
Sbjct: 376  VLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKGKRKLNGEDAKSSNGAPVKK 435

Query: 1241 VKTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
            VKTENEVK +VK+E + +TK +  T                   VTE+EIR VLLQ  PV
Sbjct: 436  VKTENEVKPAVKEESSPATKGTA-TPKVTPPSSKTGSTSGSTGPVTEEEIRAVLLQNGPV 494

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TTQDLVA+FKSRL+  EDK AFA ILRRISKIQKT+G+NYVVLR++
Sbjct: 495  TTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNYVVLRDK 540


>gb|EOY28869.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao]
          Length = 549

 Score =  538 bits (1386), Expect = e-150
 Identities = 303/536 (56%), Positives = 338/536 (63%), Gaps = 18/536 (3%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            TV+LYGS CKH+TLCV CGKTMAEN+ KC+ECG  +TRLIREYNVR   S+DKN+FIGRF
Sbjct: 17   TVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYNVRPSPSTDKNFFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             +GLP+F KK   ENKW+LQKEGLQGRQ+TD LREKYKNKPW+LEDETGQ QY G LEGS
Sbjct: 77   MSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWMLEDETGQAQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM+QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGY+RWMMK
Sbjct: 137  QSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYERWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNGAAAFGEVEK DDK++               DE + SDRG+EDEEEEA+RKN    
Sbjct: 197  AANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRGEEDEEEEAARKNRLGL 256

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGN+PEER DLAPE+PAP
Sbjct: 257  DKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVGNEPEER-DLAPEVPAP 315

Query: 896  PEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN-XXXXXXXXXXXXXXXXISPVL 1072
            PEIK+                           +A GLN                  +P  
Sbjct: 316  PEIKE--DEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADDDDDDDDDDDMSFNPAP 373

Query: 1073 APK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKT 1249
            A K K+APKEEP DNSP+                                NG PLKKVK+
Sbjct: 374  ASKQKDAPKEEPADNSPMKPASSASARGTSTASKSAKGKRKANGDDTKASNGTPLKKVKS 433

Query: 1250 ENEVK-SVKDEPASSTKSSVP------------TXXXXXXXXXXXXXXXXXXXVTEDEIR 1390
            E + K SVK+E AS++K SVP            T                   VTE+EIR
Sbjct: 434  ETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSSAKAGSASTAGPVTEEEIR 493

Query: 1391 TVLLQKTPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGA-NYVVLRER 1555
             VLLQK PVTT DLVAKFK+RLK  EDK AFA ILRRISKIQKTNG  NYVVLR++
Sbjct: 494  AVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLRDK 549


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  528 bits (1361), Expect = e-147
 Identities = 295/526 (56%), Positives = 333/526 (63%), Gaps = 8/526 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC+ CGKTMAENR KC++CG  +TRLIREYNVRA +SS+KNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYNVRASTSSEKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP F KK   ENKW+L KEG+ GRQ+TD+LREK+KNKPWLLEDETGQFQY G LEGS
Sbjct: 77   VTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLLEDETGQFQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWM 529
            QSATYYLLM+ GKEFVAIPAGSW  YNFNKVA YKQLTLEEAEEKMKNRRKTADGY+RWM
Sbjct: 137  QSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEEKMKNRRKTADGYERWM 196

Query: 530  MKAANNGAAAFGEVEKSDDKES-XXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNX 706
            MKAA+NGAAAFGEVEK DDK+                 DE N SD+G+EDEEEEA RK+ 
Sbjct: 197  MKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVSDKGEEDEEEEAGRKSR 256

Query: 707  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEI 886
                                            WEHEEIFTDDDEAV  DPEEREDLAPE+
Sbjct: 257  LGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVAIDPEEREDLAPEV 316

Query: 887  PAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXISP 1066
            PAPPEIKQ                           +ANGLN                ISP
Sbjct: 317  PAPPEIKQ-DEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAEDDDDDDDMDDDISP 375

Query: 1067 VLAPKKE--APKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKK 1240
            VLAPK++   PKEEP DNSP                               T NGAP+KK
Sbjct: 376  VLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKRKLNADDAKTSNGAPVKK 435

Query: 1241 VKTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
                 EVK +VK+E + +TK +  T                   VTE+EIR VLLQ  PV
Sbjct: 436  -----EVKPTVKEESSPATKGTA-TPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPV 489

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TTQDLVA+FKSRL+  EDK AFA ILRRISKIQKT+G+N+VVLR++
Sbjct: 490  TTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 535


>ref|XP_004486214.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Cicer arietinum]
          Length = 538

 Score =  522 bits (1344), Expect = e-145
 Identities = 296/527 (56%), Positives = 331/527 (62%), Gaps = 9/527 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC+ CGKTMAENRAKCY+CG  +TRLIREYNVRA S++DKNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLTCGKTMAENRAKCYDCGATLTRLIREYNVRASSANDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKW LQK+GLQ R+VTD+LREK+KN+PWLLEDETGQ QY G LEGS
Sbjct: 77   MTGLPDFSKKKSAENKWCLQKDGLQRREVTDALREKFKNRPWLLEDETGQSQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM + KEFVA PAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMK
Sbjct: 137  QSATYYLLMKEKKEFVAXPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNG AAFGE  K D+KES               DE   SD+G+EDE+EE  RK+    
Sbjct: 197  AANNGPAAFGEHGKLDEKESNTGGGRSRKKTGDD-DEGVVSDKGEEDEDEEVDRKSRLGL 255

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--WEHEEIFTDDDEAVGNDPEEREDLAPEIP 889
                                           WEHEEIFTDDDEAVGNDPEEREDLAPEIP
Sbjct: 256  NKKSGYDDDEDEGPKGGDSDIDGDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEIP 315

Query: 890  APPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGL---NXXXXXXXXXXXXXXXXI 1060
            APPEIKQ                           R +GL   +                +
Sbjct: 316  APPEIKQDDDEEDEDNEEEGGLSKSGKELKKLLGRTSGLDESDAEDDDDDDDDIDDEVGV 375

Query: 1061 SPVLAPKKEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKK 1240
             PV A KKE PKEEPVD SP                                PN AP KK
Sbjct: 376  PPVTAAKKE-PKEEPVDTSP---SKPTTTGPARGTPTSKSSKGKRKASEEAKPNIAPTKK 431

Query: 1241 VKTENEVKSV-KDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
            VKTENE KS  KD   S++KS+ P+                   VTE+EIRTVL+QKTPV
Sbjct: 432  VKTENEPKSSGKDVNGSTSKSNAPSKGAPPPPSKAGSSTAASGPVTEEEIRTVLMQKTPV 491

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQK-TNGANYVVLRER 1555
            TTQDLVAKFK+RL+  EDK AFA IL+RISKIQK TNG++YV+LR R
Sbjct: 492  TTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTNGSSYVILRGR 538


>gb|ESW26005.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  521 bits (1342), Expect = e-145
 Identities = 285/526 (54%), Positives = 337/526 (64%), Gaps = 8/526 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC+ CGKTMAEN+AKC++CG  +TRLIREY+VRA S SDK+YFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYSVRASSGSDKHYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             +GLP+F KK   ENKW+LQKEGLQ RQVTD+LREKYKNKPWLLEDETGQ Q+ G LEG+
Sbjct: 77   VSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLLEDETGQSQFQGHLEGA 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM++ KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMK
Sbjct: 137  QSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNG AAFGE  + D+KES               +E + SD+G+EDE++E +R++    
Sbjct: 197  AANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKGEEDEDDEVARRSRLGL 256

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGNDPEEREDLAPE+PAP
Sbjct: 257  NKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAP 316

Query: 896  PEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN--XXXXXXXXXXXXXXXXISPV 1069
            PEIKQ                           R +GLN                  + PV
Sbjct: 317  PEIKQ-DDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNESDAEDDDDDDDVDDEAGVPPV 375

Query: 1070 LAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVK 1246
            +A K K+APKEEP DNSP                                 NGAP KKVK
Sbjct: 376  IASKPKDAPKEEPADNSP-SKPAVTGTARGTLSTSKPSKGKRKLNEETKAANGAPPKKVK 434

Query: 1247 TENEVKS-VKDEPASSTKSSVPT--XXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
             ENE KS VKDE  S++K++ P+                     V+E+EIR VL+QKTP+
Sbjct: 435  IENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPIASGPVSEEEIRAVLMQKTPL 494

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TTQDLVAKF++RL+  EDK AFA IL+RISKIQKTN ++YV+LR+R
Sbjct: 495  TTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNASSYVILRDR 540


>gb|ESW19654.1| hypothetical protein PHAVU_006G143600g [Phaseolus vulgaris]
          Length = 540

 Score =  518 bits (1333), Expect = e-144
 Identities = 293/527 (55%), Positives = 333/527 (63%), Gaps = 9/527 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T +LYGS CKH+TLC++CGKTMAENRAKC +CG  +TRLIREYNVRA S++DKNYFIGRF
Sbjct: 17   TTDLYGSNCKHMTLCLSCGKTMAENRAKCVDCGVTLTRLIREYNVRASSTNDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKWALQKEGL GRQ+TD+LREKYKNKPWLLEDETGQ QY G LEGS
Sbjct: 77   MTGLPDFSKKKSAENKWALQKEGLLGRQITDTLREKYKNKPWLLEDETGQSQYQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMK
Sbjct: 137  QSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNG AAFG+  K D+KES               +E + SD+G+EDE++E+ RKN    
Sbjct: 197  AANNGPAAFGDHGKFDEKES-NTGGGRSRKKTGEEEEGHVSDKGEEDEDDESERKNRLGL 255

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGNDPEEREDLAPE+PAP
Sbjct: 256  YKRPADDDEEGPRGGDHDLEDDDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAP 315

Query: 896  PEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLN---XXXXXXXXXXXXXXXXISP 1066
            PEIKQ                           +A+GLN                     P
Sbjct: 316  PEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDEDDDDDDMDDEVGNPP 375

Query: 1067 VLAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
            V+A K K+APKEEPVDNSP                                 N A  KKV
Sbjct: 376  VIATKTKDAPKEEPVDNSP--SKPTATGPARGTPSSKSSKGKRKSNEEVKPTNTATPKKV 433

Query: 1244 KTENEVK-SVKDEPASSTKSSV-PTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPV 1417
            K ENE K S KD   S++KS+  P                    V+E+EIR VL QKTPV
Sbjct: 434  KQENEPKSSAKDVNGSASKSNAPPKGTPPSSSSKPGSSATASGPVSEEEIRAVLRQKTPV 493

Query: 1418 TTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKT-NGANYVVLRER 1555
            TTQDLVAKFK+RL+  EDK AFA IL+RISKIQKT NG++YV+LR++
Sbjct: 494  TTQDLVAKFKARLRSSEDKQAFAEILKRISKIQKTANGSSYVILRDK 540


>gb|EMJ12738.1| hypothetical protein PRUPE_ppa003970mg [Prunus persica]
          Length = 537

 Score =  517 bits (1332), Expect = e-144
 Identities = 290/526 (55%), Positives = 336/526 (63%), Gaps = 8/526 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T ELYGS CKH+TLC++CGKTMAENRAKC++CG  +TRLIREYNVRA + +DKNYFIGRF
Sbjct: 17   TSELYGSNCKHMTLCLSCGKTMAENRAKCFDCGAIVTRLIREYNVRASTVNDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKW+L KEGLQGRQ++D+LR+KYKNKPW+LEDETGQ QY G LEG+
Sbjct: 77   VTGLPSFSKKKNAENKWSLHKEGLQGRQLSDTLRDKYKNKPWVLEDETGQSQYQGHLEGA 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            Q+ATYYLLM QGKEF AIPAGSW+NFNKVAQYKQLTLEEAEEK+KNR+KTADGY+RWMMK
Sbjct: 137  QTATYYLLMRQGKEFSAIPAGSWFNFNKVAQYKQLTLEEAEEKIKNRKKTADGYERWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNGAAAFGEVE+ D   S                E N SD+G+EDEEEE +RKN    
Sbjct: 197  AANNGAAAFGEVERFDKDNSVTSGKGRKKAGDDDDGEGNVSDKGEEDEEEELARKN-RLN 255

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGN+PEEREDL  E+PAP
Sbjct: 256  KKGGDDDDDDGARGADADLDDDDVEKGDDWEHEEIFTDDDEAVGNNPEEREDLELEVPAP 315

Query: 896  PEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGL---NXXXXXXXXXXXXXXXXISP 1066
            PEIKQ                           R  GL   +                   
Sbjct: 316  PEIKQ-DDEDEDEDDKEGGLSKSGKELKKLLGRTGGLDDSDAEDDDDDDDDMDDDIGFPQ 374

Query: 1067 VLAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
              APK K+A KEEP DNSP                               T N AP KKV
Sbjct: 375  AAAPKQKDASKEEPSDNSPSKPVPSGSARGTPSTAKSAKGKRKLSADDAKTSNSAPPKKV 434

Query: 1244 KTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            K+ENE K S K+EPAS++KSS P+                   VTE+EIRTVL+Q+TPVT
Sbjct: 435  KSENEQKVSTKEEPASASKSSTPS---KGTPSVKVEPTSSSGPVTEEEIRTVLVQRTPVT 491

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQK-TNGANYVVLRER 1555
            TQDLVA+FK+RL+L+EDK AFAAILR+ISKIQK TNG++YVVLR++
Sbjct: 492  TQDLVARFKARLRLQEDKTAFAAILRKISKIQKTTNGSSYVVLRDK 537


>ref|XP_003594206.1| Transcription initiation factor IIF subunit alpha [Medicago
            truncatula] gi|87241158|gb|ABD33016.1| Transcription
            Factor IIF, Rap30/Rap74, interaction [Medicago
            truncatula] gi|355483254|gb|AES64457.1| Transcription
            initiation factor IIF subunit alpha [Medicago truncatula]
          Length = 536

 Score =  513 bits (1321), Expect = e-142
 Identities = 287/525 (54%), Positives = 326/525 (62%), Gaps = 7/525 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T  LYGS CKHLT+C  CGKTMAENR+KC  CG  +TRLIREYNVRA S++DKNYFIGRF
Sbjct: 15   TTGLYGSNCKHLTICAPCGKTMAENRSKCSTCGALLTRLIREYNVRASSANDKNYFIGRF 74

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             TGLP+F KK   ENKW+LQK+GL+GRQVTD+ REKYKN+PWLLEDETGQ Q+ G LEGS
Sbjct: 75   MTGLPDFSKKKSAENKWSLQKDGLKGRQVTDATREKYKNRPWLLEDETGQSQFQGHLEGS 134

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLLM + KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGYQRWMMK
Sbjct: 135  QSATYYLLMKEKKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYQRWMMK 194

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AANNG AAFGE  K DDKES               DE  +SD+G+EDE+EE  RK     
Sbjct: 195  AANNGPAAFGEHGKLDDKESNAGGGRGRKKTGDDEDEGPSSDKGEEDEDEEVDRKK-RPN 253

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAP 895
                                         WEHEEIFTDDDEAVGNDPEEREDLAPE+PAP
Sbjct: 254  KKNTFDDDEEGPRGGDHDEDDYDVEKGDDWEHEEIFTDDDEAVGNDPEEREDLAPEVPAP 313

Query: 896  PEIKQ--XXXXXXXXXXXXXXXXXXXXXXXXXXXRANGL--NXXXXXXXXXXXXXXXXIS 1063
            PEIKQ                             R  GL  +                + 
Sbjct: 314  PEIKQDDEEEEEDEDNEEGGGLSKSGKELKKLLGRTGGLSESDDDDDDDDDDIDDEDGVP 373

Query: 1064 PVLAPKKEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
             V A K++ PKEEPVDNSP                                    P KKV
Sbjct: 374  AVTATKQKEPKEEPVDNSPSKPTATGPARGTPTSKSSKAKRKANEEAKPSI--SVPPKKV 431

Query: 1244 KTENEVK-SVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            KTENE K S KD   SS+KS+ P                    VTE+EI+ VLLQ+TP+T
Sbjct: 432  KTENEPKSSAKDVNGSSSKSNAPPRGTPPPSSNSGSSNAASGPVTEEEIKAVLLQRTPLT 491

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGANYVVLRER 1555
            TQ+LVAKF++RL+ KEDK+AFA IL+RISKIQKTNG++YV+LRE+
Sbjct: 492  TQELVAKFRARLRCKEDKEAFANILKRISKIQKTNGSSYVILREK 536


>ref|XP_004152016.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Cucumis sativus] gi|449517383|ref|XP_004165725.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Cucumis sativus]
          Length = 538

 Score =  505 bits (1301), Expect = e-140
 Identities = 286/525 (54%), Positives = 324/525 (61%), Gaps = 8/525 (1%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRF 181
            T ELYGS CKH+TLC+ CGKTMAEN+ KCY+CG  +TRLIREYNVRA +S+DKNYFIGRF
Sbjct: 17   TTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVTRLIREYNVRASASNDKNYFIGRF 76

Query: 182  ATGLPNFKKKN--ENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGS 355
             +GLPNF KK   ENKW+L KEGLQGRQ++D+LREKYKN+PWLLEDETGQFQ+ G LEGS
Sbjct: 77   MSGLPNFSKKRNAENKWSLYKEGLQGRQLSDALREKYKNRPWLLEDETGQFQFQGHLEGS 136

Query: 356  QSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMK 535
            QSATYYLL+LQGKEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMK
Sbjct: 137  QSATYYLLVLQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMK 196

Query: 536  AANNGAAAFGEVEKSDDKESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            AA+NG AAFGEVEK DDKE+               +E N SDRG+EDEEEEA+RKN    
Sbjct: 197  AASNGPAAFGEVEKFDDKETVGTSGRGRRKTTGDENEGNVSDRGEEDEEEEAARKNRLGL 256

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--WEHEEIFTDDDEAVGNDPEEREDLAPEIP 889
                                           WEHEEIFTDDDE    D EEREDLAPE+P
Sbjct: 257  SKKGGGDDDDEEGPRGGDHDLDDDDIEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVP 316

Query: 890  APPEIKQXXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXI--S 1063
            APPEIKQ                           R  GLN                   +
Sbjct: 317  APPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDVDEDTGGT 376

Query: 1064 PVLAPK-KEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKK 1240
            PVL  K K+  KEE   NSP                                P+ AP KK
Sbjct: 377  PVLPSKQKDTVKEEAAANSP--SKPTPSGSAKGTPSTAKTAKGKRKNGEDVKPSSAPPKK 434

Query: 1241 VKTENEVKSVKDEPASSTKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVT 1420
            +KTE E K+  DE   ++KS   T                   VTE+EIR VL Q+TPVT
Sbjct: 435  MKTETESKAT-DEGVPTSKS---TASKGAPASVKTEPSSHSGPVTEEEIRAVLRQRTPVT 490

Query: 1421 TQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTNGA-NYVVLRE 1552
            TQDLVAKFK+RL+  EDK+AFA ILRRIS+IQKTNG  +YVVLR+
Sbjct: 491  TQDLVAKFKARLRTPEDKNAFAEILRRISRIQKTNGGPSYVVLRK 535


>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|223530933|gb|EEF32792.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 584

 Score =  500 bits (1287), Expect = e-139
 Identities = 289/569 (50%), Positives = 330/569 (57%), Gaps = 51/569 (8%)
 Frame = +2

Query: 2    TVELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLI-------------------- 121
            T +LYGS CKH+TLC+NCGKTMAENR KC++CG  IT+ +                    
Sbjct: 17   TTDLYGSNCKHMTLCLNCGKTMAENRRKCFDCGVTITQRLLGLGSLSWAGHQVHVSLPIN 76

Query: 122  ------------------------REYNVRACSSSDKNYFIGRFATGLPNFKKKN--ENK 223
                                    +EYNVRA  SSDKNYFIGRF TGLP F KK   ENK
Sbjct: 77   QFLNAGVDPKEISLPHEFILNWDTKEYNVRASPSSDKNYFIGRFVTGLPIFSKKKNAENK 136

Query: 224  WALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQSATYYLLMLQGKEFV 403
            W++ KEGLQGRQ+TD+LREK+KNKPWLLEDETGQ+QYHG LEGSQSATYYLL+LQGKEFV
Sbjct: 137  WSIHKEGLQGRQLTDALREKFKNKPWLLEDETGQYQYHGHLEGSQSATYYLLILQGKEFV 196

Query: 404  AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAANNGAAAFGEVEKSD 583
            AIPA SWYNFNKVAQYK LTLEEAEEKMKNRRKTADGY+RWMMKAANNG AAFGE+EK D
Sbjct: 197  AIPAASWYNFNKVAQYKMLTLEEAEEKMKNRRKTADGYERWMMKAANNGPAAFGEMEKPD 256

Query: 584  DKE-SXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXXXXXXXXXXXXXXXXX 760
            DK+                 DE   SD+G+EDEEEE SRKN                   
Sbjct: 257  DKDVRTTSGRGRRKTAGDDDDEGKISDKGEEDEEEEMSRKNRLGLNRQGGGDDDEGPRGG 316

Query: 761  XXXXXXXXXXXXXXWEHEEIFTDDDEAVGNDPEEREDLAPEIPAPPEIKQXXXXXXXXXX 940
                          WEHEEIFTDDDEAVGNDPEER+DL PE+PAPPEIKQ          
Sbjct: 317  DHDMDDDDVEKGDDWEHEEIFTDDDEAVGNDPEERQDLGPELPAPPEIKQ-DEDDEDEEN 375

Query: 941  XXXXXXXXXXXXXXXXXRANGL-NXXXXXXXXXXXXXXXXISPVLAPK-KEAP-KEEPVD 1111
                             R+ GL +                +SPVLA K K+AP KEEP D
Sbjct: 376  EEGGLSKSGKELKALLGRSGGLDDTDAEDDDDDDMDEDTGLSPVLAQKQKDAPIKEEPGD 435

Query: 1112 NSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKVKTENEVKS-VKDEPAS 1288
            NSP                               T N +P KKVKTENE K  VK+E   
Sbjct: 436  NSPAKPMHSSSAKGALSASKSAKGKRKTNGDDGKTSNVSPQKKVKTENESKHIVKEENVP 495

Query: 1289 STKSSVPTXXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKTPVTTQDLVAKFKSRLKLKE 1468
            ++KS                       VT++EI+ VLLQ  PVTTQDLVAKFKSRLK +E
Sbjct: 496  TSKSKSSANPKGAAASLRTESTSSTGFVTDEEIKAVLLQNGPVTTQDLVAKFKSRLKTRE 555

Query: 1469 DKDAFAAILRRISKIQKTNGANYVVLRER 1555
            DK+AF   L+RIS+IQKT+G +YVVLR++
Sbjct: 556  DKEAFTHTLKRISRIQKTSGGSYVVLRDK 584


>ref|XP_006857695.1| hypothetical protein AMTR_s00061p00167160 [Amborella trichopoda]
            gi|548861791|gb|ERN19162.1| hypothetical protein
            AMTR_s00061p00167160 [Amborella trichopoda]
          Length = 558

 Score =  499 bits (1286), Expect = e-138
 Identities = 284/529 (53%), Positives = 324/529 (61%), Gaps = 13/529 (2%)
 Frame = +2

Query: 8    ELYGSTCKHLTLCVNCGKTMAENRAKCYECGNPITRLIREYNVRACSSSDKNYFIGRFAT 187
            +LYGS CKHLTLC +CGKTMAE R+KCYECG PITRLIREYNVRA  ++DK Y+I RF  
Sbjct: 30   DLYGSNCKHLTLCQSCGKTMAETRSKCYECGTPITRLIREYNVRANVNTDKTYYISRFVM 89

Query: 188  GLPNF--KKKNENKWALQKEGLQGRQVTDSLREKYKNKPWLLEDETGQFQYHGQLEGSQS 361
            GLP F  KK  + KW LQKEGLQGRQVT+SLREK+KNKPWLLEDETGQ QYHGQLEG+QS
Sbjct: 90   GLPGFSRKKNGDVKWTLQKEGLQGRQVTESLREKFKNKPWLLEDETGQHQYHGQLEGAQS 149

Query: 362  ATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKTADGYQRWMMKAA 541
            ATYYLL  QGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRK A+GY+RW+MKAA
Sbjct: 150  ATYYLLTNQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRRKNAEGYERWIMKAA 209

Query: 542  NNGAAAFGEVEKSDDK--ESXXXXXXXXXXXXXXXDEANASDRGDEDEEEEASRKNXXXX 715
            NNGA+AF ++EK D                     D+A  SDR  ED+++E +RKN    
Sbjct: 210  NNGASAFRDMEKIDGSGGNGGASGGRRRKGSGDEDDDAVRSDREGEDDDDEEARKNRLGL 269

Query: 716  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WEHEEIFTDDDEAVGNDPEEREDLAPEIPA 892
                                          WEHEEIFTDDDEAVGNDPEERED APE+PA
Sbjct: 270  NKKTFDDEGEEVPRGDDHDFDDDDIEKGDDWEHEEIFTDDDEAVGNDPEEREDFAPEVPA 329

Query: 893  PPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXXXXRANGLNXXXXXXXXXXXXXXXXI--S 1063
            PPEIKQ                            RA GLN                +  S
Sbjct: 330  PPEIKQDDEDEDEGNEDEEGGLSKSGRELKKLLGRAGGLNESDGDDDDDDDDLDDDMGTS 389

Query: 1064 PVLAPKKEAPKEEPVDNSPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPNGAPLKKV 1243
             VLAPK++  KEEPVDNSP                                   AP KK 
Sbjct: 390  SVLAPKQKEVKEEPVDNSPTKTATSGSNRGTPSTSKSTKAKRKSGSDDAKPAASAPSKKP 449

Query: 1244 KTENEVK---SVKDEPASSTKSSVPT-XXXXXXXXXXXXXXXXXXXVTEDEIRTVLLQKT 1411
            K EN+ K   +VKDEPAS+ +S+ P                     VTEDEIR VLLQ  
Sbjct: 450  KIENDSKPATTVKDEPASAQRSNTPVKLPSSSGTKPAGSPVAAAVPVTEDEIRAVLLQMA 509

Query: 1412 PVTTQDLVAKFKSRLKLKEDKDAFAAILRRISKIQKTN-GANYVVLRER 1555
            PVTTQDLV KFK+RL+ KEDKD+FAA+L++IS+IQKTN GAN+VVLR++
Sbjct: 510  PVTTQDLVGKFKARLRTKEDKDSFAAVLKKISRIQKTNGGANFVVLRDK 558