BLASTX nr result
ID: Rehmannia24_contig00009002
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00009002
(420 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloro... 60 4e-14
ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citr... 68 1e-13
ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus... 72 3e-13
gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma ca... 64 8e-13
gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus pe... 63 2e-12
ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloro... 62 2e-12
ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloro... 60 4e-12
gb|EPS64680.1| hypothetical protein M569_10102, partial [Genlise... 74 5e-12
ref|XP_002329074.1| predicted protein [Populus trichocarpa] gi|5... 63 8e-12
ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloro... 64 2e-10
gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK4693... 70 4e-10
gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis] 67 2e-09
ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycin... 67 3e-09
ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatu... 61 7e-09
gb|ESW05227.1| hypothetical protein PHAVU_011G162800g [Phaseolus... 63 5e-08
ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloro... 62 8e-08
ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycin... 62 8e-08
ref|XP_006298594.1| hypothetical protein CARUB_v10014678mg [Caps... 62 1e-07
ref|XP_006407001.1| hypothetical protein EUTSA_v10021521mg [Eutr... 62 1e-07
ref|XP_002882919.1| hypothetical protein ARALYDRAFT_897793 [Arab... 62 1e-07
>ref|XP_004244249.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
lycopersicum]
Length = 184
Score = 60.5 bits (145), Expect(2) = 4e-14
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSEVRTR+K VLEALE L KK+DA+ EEV+ VEKLIAEA
Sbjct: 90 KAKKSEVRTRIKTVLEALETLRKKTDAESEEVVSVEKLIAEA 131
Score = 42.7 bits (99), Expect(2) = 4e-14
Identities = 29/64 (45%), Positives = 30/64 (46%)
Frame = +2
Query: 83 SCWGLPAKLKTLSLTNSPHAACKPXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRSIVCEA 262
SC K TLSL N PHA +G VSV PVQM P RRSIVCEA
Sbjct: 9 SCLSFSTKFNTLSL-NGPHADAFRSLSFSANTSLNLFSKGTVSVNPVQM-PFRRSIVCEA 66
Query: 263 GTKK 274
K
Sbjct: 67 APTK 70
>ref|XP_006451780.1| hypothetical protein CICLE_v10009636mg [Citrus clementina]
gi|568820617|ref|XP_006464806.1| PREDICTED: 30S
ribosomal protein S20, chloroplastic-like [Citrus
sinensis] gi|557555006|gb|ESR65020.1| hypothetical
protein CICLE_v10009636mg [Citrus clementina]
Length = 185
Score = 67.8 bits (164), Expect(2) = 1e-13
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSEV+TRMKKVLEAL+ L KK DAQPEEVLPVEKLIAEA
Sbjct: 96 KSRKSEVKTRMKKVLEALDGLRKKPDAQPEEVLPVEKLIAEA 137
Score = 33.9 bits (76), Expect(2) = 1e-13
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +2
Query: 74 HCVS---CWGLPAKLKTLSLTN--SPHA--ACKPXXXXXXXXXXXXXXRGLVSVRPVQMS 232
HC+S C + +K KTLSL N S H+ A G +++ P+Q
Sbjct: 4 HCLSSSSCLTIQSKFKTLSLNNNSSSHSSFATFKSLCFSNKLSHNVFSTGSLTMSPIQR- 62
Query: 233 PNRRSIVCEAGTKK 274
P R S+VC+A TKK
Sbjct: 63 PMRHSVVCKAATKK 76
>ref|XP_002532240.1| 30S ribosomal protein S20, putative [Ricinus communis]
gi|223528058|gb|EEF30134.1| 30S ribosomal protein S20,
putative [Ricinus communis]
Length = 185
Score = 71.6 bits (174), Expect(2) = 3e-13
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KAHKSEVRTRMKKVLEAL+ L KKSDAQ EEVLP+EKLIAEA
Sbjct: 95 KAHKSEVRTRMKKVLEALDDLRKKSDAQAEEVLPIEKLIAEA 136
Score = 28.9 bits (63), Expect(2) = 3e-13
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 83 SCWGLPAKLKTLSLTNSPHAA----CKPXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRSI 250
SC+ +P KLK+LSLT + + +G +S+ V+ P SI
Sbjct: 9 SCFSVPTKLKSLSLTTTSSSTITYPALRSLSFSSAISHDVFNKGCLSMSIVK-RPIGHSI 67
Query: 251 VCEAGTKK 274
VCEA KK
Sbjct: 68 VCEAAPKK 75
>gb|EOY13088.1| 30S ribosomal protein S20 isoform 1 [Theobroma cacao]
Length = 193
Score = 64.3 bits (155), Expect(2) = 8e-13
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSEVRTRMKKVLEAL+VL KK DAQ EE+ +EKLIAEA
Sbjct: 104 KARKSEVRTRMKKVLEALDVLRKKPDAQAEEIFSIEKLIAEA 145
Score = 34.7 bits (78), Expect(2) = 8e-13
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Frame = +2
Query: 83 SCWGLPAKLKTLSLTNS---------PHAACKPXXXXXXXXXXXXXXRGLVSVRPVQMSP 235
SC+ L +KLK+LSL NS +++ +G +S+ + +P
Sbjct: 12 SCFTLQSKLKSLSLRNSADSSSYALHQNSSAFKTLSFSNSLSHNFFSKGSLSISTMTQNP 71
Query: 236 NRRSIVCEAGTKK 274
RR++VCEA KK
Sbjct: 72 IRRTVVCEAAPKK 84
>gb|EMJ13317.1| hypothetical protein PRUPE_ppa012008mg [Prunus persica]
Length = 187
Score = 62.8 bits (151), Expect(2) = 2e-12
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSE++TRMKKVLEAL+VL KK DA PEEVL +EKLI EA
Sbjct: 99 KSRKSEIKTRMKKVLEALDVLRKKPDATPEEVLSIEKLIGEA 140
Score = 35.0 bits (79), Expect(2) = 2e-12
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = +2
Query: 74 HCVS-CWGLPAKLKTLSLTNSPHAACKPXXXXXXXXXXXXXX--------RGLVSVRPVQ 226
HC+S C LP+KL LSL N P + +G S+ PVQ
Sbjct: 6 HCLSSCLALPSKLSNLSL-NGPSTSSATHSTSTHFTSLSFSASLSHNFFSKGYFSLSPVQ 64
Query: 227 MSPNRRSIVCEAGTKK 274
P RRS+VCE T K
Sbjct: 65 R-PTRRSVVCEVATTK 79
>ref|XP_004291502.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 186
Score = 62.0 bits (149), Expect(2) = 2e-12
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSE++TRMKKVLEAL+VL KK DAQ EEVL +EKLI EA
Sbjct: 97 KSRKSEIKTRMKKVLEALDVLKKKPDAQAEEVLSIEKLIGEA 138
Score = 35.4 bits (80), Expect(2) = 2e-12
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 74 HCVS--CWGLPAKLKTLSL----TNSPHAACKPXXXXXXXXXXXXXXRGLVSVRPVQMSP 235
HC+S C LP+K LSL T+S + P +G +++ PVQ S
Sbjct: 6 HCLSSSCLALPSKFGNLSLNGPSTSSASSTHFPSLSFSANLSHDFFSKGFLNLGPVQRSV 65
Query: 236 NRRSIVCEAGTKK 274
RRS+VCEA K
Sbjct: 66 -RRSVVCEAAPTK 77
>ref|XP_006348272.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Solanum
tuberosum]
Length = 184
Score = 60.5 bits (145), Expect(2) = 4e-12
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSEVRTR+K VLEALE L KK+DA+ EEV+ VEKLIAEA
Sbjct: 90 KAKKSEVRTRIKTVLEALETLRKKTDAESEEVVSVEKLIAEA 131
Score = 36.2 bits (82), Expect(2) = 4e-12
Identities = 27/64 (42%), Positives = 29/64 (45%)
Frame = +2
Query: 83 SCWGLPAKLKTLSLTNSPHAACKPXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRSIVCEA 262
SC K TLSL N HA +G VS+ PVQM P RRSIVCEA
Sbjct: 9 SCLIFTTKFNTLSL-NGLHADAFRSLSFCANTSLNLFSKGTVSLNPVQM-PFRRSIVCEA 66
Query: 263 GTKK 274
K
Sbjct: 67 APTK 70
>gb|EPS64680.1| hypothetical protein M569_10102, partial [Genlisea aurea]
Length = 123
Score = 73.9 bits (180), Expect(2) = 5e-12
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE+RTRMKKVLEALEVLGKK DAQPEEV+PVEKLI EA
Sbjct: 36 KARKSEIRTRMKKVLEALEVLGKKPDAQPEEVVPVEKLIGEA 77
Score = 22.3 bits (46), Expect(2) = 5e-12
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2
Query: 239 RRSIVCEAGTKK 274
R SIVCEAG KK
Sbjct: 6 RFSIVCEAGGKK 17
>ref|XP_002329074.1| predicted protein [Populus trichocarpa]
gi|566153920|ref|XP_006370215.1| chloroplast 30S
ribosomal protein S20 [Populus trichocarpa]
gi|550349394|gb|ERP66784.1| chloroplast 30S ribosomal
protein S20 [Populus trichocarpa]
Length = 182
Score = 62.8 bits (151), Expect(2) = 8e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSEV+TRMKKVLEAL+ L KK +AQ EEVLP+EKLIAEA
Sbjct: 92 KARKSEVKTRMKKVLEALDDLKKKPEAQFEEVLPIEKLIAEA 133
Score = 32.7 bits (73), Expect(2) = 8e-12
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 86 CWGLPAKLKTLSLTNSPHAACK-PXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRSIVCEA 262
C GLP KLK LSL ++ + +G +S+R Q S + SIVCE+
Sbjct: 9 CLGLPPKLKNLSLNSTTCSTSTFSSLSFSSSLSHSIFNKGCLSMRTTQRSIHNFSIVCES 68
Query: 263 GTKK 274
KK
Sbjct: 69 TPKK 72
>ref|XP_002285149.1| PREDICTED: 30S ribosomal protein S20, chloroplastic [Vitis
vinifera] gi|302142967|emb|CBI20262.3| unnamed protein
product [Vitis vinifera]
Length = 183
Score = 64.3 bits (155), Expect(2) = 2e-10
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE+RTRMKKVLE L+ L KK DAQ EEVLP+EKLIAEA
Sbjct: 95 KARKSEIRTRMKKVLEELDGLKKKPDAQAEEVLPIEKLIAEA 136
Score = 26.6 bits (57), Expect(2) = 2e-10
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 86 CWGLPAKLKTLSLTNSPHAACK---PXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRSIVC 256
C LP+K + LSL S ++C +G +S+ ++ P SIVC
Sbjct: 11 CLALPSKFRILSLNASSSSSCSVPFTSLGFSSNLSQTVFSKGRLSISTIR-GPTHHSIVC 69
Query: 257 EA 262
+A
Sbjct: 70 DA 71
>gb|AFK46331.1| unknown [Lotus japonicus] gi|388517753|gb|AFK46938.1| unknown
[Lotus japonicus]
Length = 177
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/42 (80%), Positives = 38/42 (90%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE++TRMKKVLEALE L KKSDAQPEE+LP+EKLI EA
Sbjct: 89 KARKSEIKTRMKKVLEALESLKKKSDAQPEEILPIEKLIGEA 130
>gb|EXC08476.1| hypothetical protein L484_009619 [Morus notabilis]
Length = 180
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSEV+TRMKKVLEAL+ L KK DAQ EEVLPVEKLIAEA
Sbjct: 92 KARKSEVKTRMKKVLEALDTLKKKQDAQAEEVLPVEKLIAEA 133
>ref|NP_001237852.1| uncharacterized protein LOC100499656 [Glycine max]
gi|255625577|gb|ACU13133.1| unknown [Glycine max]
Length = 180
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE++TR KKVLEALEVL KKSDAQ EE+LP+EKLI EA
Sbjct: 92 KARKSEIKTRTKKVLEALEVLKKKSDAQAEEILPIEKLIGEA 133
>ref|XP_003628554.1| 30S ribosomal protein S20 [Medicago truncatula]
gi|355522576|gb|AET03030.1| 30S ribosomal protein S20
[Medicago truncatula]
Length = 173
Score = 60.8 bits (146), Expect(2) = 7e-09
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE+RTR KKVLEALE+L KKSDAQ EE+ +EK+I EA
Sbjct: 85 KARKSEIRTRTKKVLEALELLKKKSDAQAEEITSIEKMIGEA 126
Score = 24.6 bits (52), Expect(2) = 7e-09
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 80 VSC--WGLPAKLKTLSLTNSPHAACKPXXXXXXXXXXXXXXRGLVSVRPVQMSPNRRS-- 247
VSC LP+K+K L+LT+S ++ +G S+ VQ RR
Sbjct: 4 VSCSLLNLPSKMKNLTLTSSSNSG--SLSFSRNISQSRVLSQGTFSLNTVQ----RRGVV 57
Query: 248 IVCEAGTKK 274
+VCEA KK
Sbjct: 58 VVCEAAPKK 66
>gb|ESW05227.1| hypothetical protein PHAVU_011G162800g [Phaseolus vulgaris]
Length = 178
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE++TR KKVLEALEVL KK DA EE+LP+EKLI EA
Sbjct: 90 KARKSEIKTRTKKVLEALEVLKKKQDAASEEILPIEKLIGEA 131
>ref|XP_004146049.1| PREDICTED: 30S ribosomal protein S20, chloroplastic-like [Cucumis
sativus] gi|449507080|ref|XP_004162928.1| PREDICTED: 30S
ribosomal protein S20, chloroplastic-like [Cucumis
sativus]
Length = 184
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/42 (73%), Positives = 37/42 (88%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE++TRMKKVLEAL+ L KK++AQ EEVLP+E LIAEA
Sbjct: 96 KARKSEIKTRMKKVLEALDGLKKKAEAQSEEVLPIETLIAEA 137
>ref|NP_001241947.1| uncharacterized protein LOC100786192 [Glycine max]
gi|255640470|gb|ACU20521.1| unknown [Glycine max]
Length = 164
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
KA KSE++TR KKVLEALEVL KK DAQ EE+L +EKLI EA
Sbjct: 76 KARKSEIKTRTKKVLEALEVLKKKQDAQAEEILSIEKLIGEA 117
>ref|XP_006298594.1| hypothetical protein CARUB_v10014678mg [Capsella rubella]
gi|482567303|gb|EOA31492.1| hypothetical protein
CARUB_v10014678mg [Capsella rubella]
Length = 200
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSE RTRMKKVLEALE L KK+DAQP+E++ VEKLI EA
Sbjct: 105 KSKKSEARTRMKKVLEALEGLKKKADAQPDEIVSVEKLIGEA 146
>ref|XP_006407001.1| hypothetical protein EUTSA_v10021521mg [Eutrema salsugineum]
gi|312281953|dbj|BAJ33842.1| unnamed protein product
[Thellungiella halophila] gi|557108147|gb|ESQ48454.1|
hypothetical protein EUTSA_v10021521mg [Eutrema
salsugineum]
Length = 209
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSE RTRMKKVLEALE L KK+DAQP+E++ VEKLI EA
Sbjct: 112 KSKKSEARTRMKKVLEALEGLKKKADAQPDEIVTVEKLIGEA 153
>ref|XP_002882919.1| hypothetical protein ARALYDRAFT_897793 [Arabidopsis lyrata subsp.
lyrata] gi|297328759|gb|EFH59178.1| hypothetical protein
ARALYDRAFT_897793 [Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 294 KAHKSEVRTRMKKVLEALEVLGKKSDAQPEEVLPVEKLIAEA 419
K+ KSE RTRMKKVLEALE L KK+DAQP+E++ VEKLI EA
Sbjct: 103 KSKKSEARTRMKKVLEALEGLKKKTDAQPDEIVTVEKLIGEA 144