BLASTX nr result

ID: Rehmannia24_contig00007234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00007234
         (828 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14233.1|TGA1B_TOBAC RecName: Full=TGACG-sequence-specific DN...    89   2e-15
ref|XP_004249119.1| PREDICTED: uncharacterized protein LOC101263...    80   1e-12
ref|XP_006364780.1| PREDICTED: uncharacterized protein LOC102579...    77   6e-12

>sp|P14233.1|TGA1B_TOBAC RecName: Full=TGACG-sequence-specific DNA-binding protein TGA-1B;
           Short=TGA1b; AltName: Full=HSBF
           gi|1345544|emb|CAA34469.1| unnamed protein product
           [Nicotiana sp.] gi|226462|prf||1513430B DNA binding
           protein TGA1b
          Length = 242

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 63/122 (51%), Positives = 76/122 (62%), Gaps = 14/122 (11%)
 Frame = +3

Query: 504 VLNSASLGLEPHQSSS----YLNVPSPESNGSNRETS-----ENCG-GDAKVSNWPSPES 653
           VLN+ S     HQ S     YLNVPSPESNGSN E S     +N G GDA+V N  SPES
Sbjct: 33  VLNATS-STSSHQVSGDVAGYLNVPSPESNGSNHEGSRESANDNKGLGDARVLNCHSPES 91

Query: 654 RGSGNFRSNISEDSN--NCVTRSVSSSPNLNTRSIRNGVVNQKIKFEEPSKRNVN--SSL 821
           +GSGN+ SN+SE  N  +   +SV SSPN    SI+NG V +KIK E  +  N++  SSL
Sbjct: 92  QGSGNYGSNVSEGLNYPSDSNKSVHSSPNFENNSIKNGAVEEKIKLEGVN-ANISKCSSL 150

Query: 822 LK 827
           LK
Sbjct: 151 LK 152


>ref|XP_004249119.1| PREDICTED: uncharacterized protein LOC101263260 [Solanum
           lycopersicum]
          Length = 822

 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 55/103 (53%), Positives = 63/103 (61%), Gaps = 9/103 (8%)
 Frame = +3

Query: 546 SSYLNVPSPESNGSN----RETSENCGG--DAKVSNWPSPESRGSGNFRS-NISEDSNNC 704
           S YLNVPSPESNGSN    RE+S +  G  DAKV N  SPES+GSGN    N   DSN  
Sbjct: 210 SGYLNVPSPESNGSNHDVSRESSNDKKGLSDAKVLNCHSPESQGSGNCGGLNYLSDSN-- 267

Query: 705 VTRSVSSSPNLNTRSIRNGVVNQKIKFEEPSKR--NVNSSLLK 827
             +SV SSPNL + S++ G V  K K E  S    N +SSLLK
Sbjct: 268 --KSVHSSPNLGSNSVKGGTVEHKFKLEGVSANISNCSSSLLK 308


>ref|XP_006364780.1| PREDICTED: uncharacterized protein LOC102579732 [Solanum tuberosum]
          Length = 822

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 54/103 (52%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
 Frame = +3

Query: 546 SSYLNVPSPESNGSN----RETSENCGG--DAKVSNWPSPESRGSGNFRS-NISEDSNNC 704
           S YLNVPSPESNGSN    RE+S +  G  DAKV N  SPES+GSGN    N   DSN  
Sbjct: 210 SGYLNVPSPESNGSNHDVSRESSNDKKGLSDAKVLNCHSPESQGSGNCGGLNYLSDSN-- 267

Query: 705 VTRSVSSSPNLNTRSIRNGVVNQKIKFEEPSKR--NVNSSLLK 827
             +SV SSPNL +  ++ GVV  K K E       N +SSLLK
Sbjct: 268 --KSVHSSPNLGSNLVKGGVVEHKFKLEGVGANISNCSSSLLK 308


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