BLASTX nr result
ID: Rehmannia24_contig00005780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia24_contig00005780 (3239 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 284 2e-73 pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 249 4e-63 ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S... 231 2e-57 gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 226 5e-56 gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 221 2e-54 gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 221 2e-54 pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1... 221 2e-54 gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 217 2e-53 ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627... 216 4e-53 ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786... 214 2e-52 gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 213 3e-52 emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 210 4e-51 emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 209 6e-51 emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 208 1e-50 ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 207 3e-50 dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ... 206 5e-50 gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 206 5e-50 ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581... 205 9e-50 gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza ... 204 2e-49 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 202 8e-49 >gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1374 Score = 284 bits (726), Expect = 2e-73 Identities = 156/459 (33%), Positives = 251/459 (54%), Gaps = 2/459 (0%) Frame = +1 Query: 1492 MRVCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNL 1671 MR+ WNC+G+G TV L+E L+ P+++FLCETKK+ ++ V L D + Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDL-HTV 59 Query: 1672 DPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQW 1851 +PIGKSGGL + W +S+Q+ + I+A +++ + +Y + ERG W Sbjct: 60 EPIGKSGGLALMWKDSVQIKVLQSDKRLIDALLI--WQDKEFYLTCIYGEPVQAERGELW 117 Query: 1852 DYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGE 2031 + L + W L GDFN++ EK GG R S + F + G+ E+ G Sbjct: 118 ERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGY 177 Query: 2032 EFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKK 2211 +F+W NR+ E V+ +LDR + W FP+ ++ SDH + +N N + Sbjct: 178 QFSWYGNRNDE-LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPL-INNLVGDNWR 235 Query: 2212 RHKRFQFDRRWVDQEGAEDLIKKAWSI-NVEGNAMYQVHHKVKNCRIELLKWNSAKQLNS 2388 + F++D+RWV +EG +DL+ WS + + NA+ K+ +CR E+ KW + +S Sbjct: 236 KWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMM--EKIASCRREISKWKRVSKPSS 293 Query: 2389 ASQVVHLNSSLESL-RAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKN 2565 A ++ L L++ + + DR + RLK EL Q YN EE FWQ+KSR+ W++ GD+N Sbjct: 294 AVRIQELQFKLDAATKQIPFDRR--ELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRN 351 Query: 2566 TKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHG 2745 TKYFHA T RR N I +LI E G ++ ++ + +++ LF SE +L Sbjct: 352 TKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVEELEN 411 Query: 2746 IPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + +S ++N+ L+ PI++ E+++A F ++PHK PGPDG Sbjct: 412 LTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDG 450 >pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana (fragment) Length = 1365 Score = 249 bits (637), Expect = 4e-63 Identities = 155/460 (33%), Positives = 234/460 (50%), Gaps = 5/460 (1%) Frame = +1 Query: 1498 VCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDP 1677 V WNC+GL P T+ LKE K H PD++FL ETK FV V L D ++P Sbjct: 2 VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGY-DFIHTVEP 60 Query: 1678 IGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVF-VYASTNERERGLQWD 1854 G+SGGL I W +++ + ++ + S K W + VY R W+ Sbjct: 61 EGRSGGLAIFWKSHLEIEFLYADKNLMDLQVS---SRNKVWFISCVYGLPVTHMRPKLWE 117 Query: 1855 YLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEE 2034 +L +K W L GDFNDI SN EK GG RS SF F + + + M E+ G Sbjct: 118 HLNSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNS 177 Query: 2035 FTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKR 2214 FTW NR+ + +V+ KLDR FG+ W FP + SDH + + +F N+ Sbjct: 178 FTWGGNRNDQ-WVQCKLDRCFGNPAWFSIFPNAHQWFLEKFGSDHRPVLV-KFTNDNELF 235 Query: 2215 HKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHK----VKNCRIELLKWNSAKQL 2382 +F++D+R D ++I ++W+ +AM Q H + CR + W + Sbjct: 236 RGQFRYDKRLDDDPYCIEVIHRSWN-----SAMSQGTHSSFFSLIECRRAISVWKHSSDT 290 Query: 2383 NSASQVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDK 2562 N+ S++ L L++ +++ W + +K +L AY +EE+FW+QKSR WL GDK Sbjct: 291 NAQSRIKRLRKDLDAEKSIQIPC-WPRIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDK 349 Query: 2563 NTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLH 2742 NT +FHA + R+ N +S L+ EN + K +SF+ NLFTS ++ L Sbjct: 350 NTGFFHATVHSERLKNELSFLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLE 409 Query: 2743 GIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 G+ ++ E+NH LI ++E E+ A+F ++ APGPDG Sbjct: 410 GLQAKVTSEMNHNLIQEVTELEVYNAVFSINKESAPGPDG 449 >ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] gi|241936261|gb|EES09406.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] Length = 753 Score = 231 bits (589), Expect = 2e-57 Identities = 137/463 (29%), Positives = 227/463 (49%), Gaps = 6/463 (1%) Frame = +1 Query: 1492 MRVCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNL 1671 M+ WNCRG+G P+TV +L++ K + P ++F+ ET+ V + L + + + Sbjct: 1 MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFA-V 59 Query: 1672 DPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQW 1851 + G+SGGL + W + + S++ I+ S G +R + F+Y N R W Sbjct: 60 NSSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMS-FIYGEPNRSFRYRTW 118 Query: 1852 DYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGE 2031 D + R W GDFN+I E+ G R + + + +++I +G Sbjct: 119 DIMKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRDIGYIGL 178 Query: 2032 EFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKK 2211 ++T+ +G +V +LDR SV WC +FP VQ + SDHC I L+ + + Sbjct: 179 DWTFEKKVAGGHFVRVRLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLSHVPDERNE 238 Query: 2212 ----RHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQ 2379 + K F+++ W E LI++ W N++ + K+ + EL W Sbjct: 239 GGGCQGKPFRYELMWETNERLSSLIEQIWKNGQHCNSVKDMKDKLFHLGEELKSWGGKTF 298 Query: 2380 LNSASQVVHLNSSLESLRAMDGDRDW--DQWNRLKAELHQAYNEEEIFWQQKSRVNWLKA 2553 ++ LE LRA D R+ ++ ++ + +EEI W+Q+SR+ WL Sbjct: 299 GVVRKELRVQKKRLEQLRA-DPSRNTVSEEEQKIVNRIILLNYQEEIMWRQRSRITWLHE 357 Query: 2554 GDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISS 2733 GD NTK+FH ++RR+ N I +L +G+ C E+ + V FY NLF SE ++ Sbjct: 358 GDSNTKFFHQRASRRRIRNRIDKLNRPDGSECTNVDELHQMVVDFYRNLFESEGTSNMNL 417 Query: 2734 QLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 L IP+ ++ ++N L P +E E+K ALF + P K+PGPDG Sbjct: 418 VLDHIPRKVTDDMNLFLCAPFNETEVKNALFQMFPTKSPGPDG 460 >gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1715 Score = 226 bits (576), Expect = 5e-56 Identities = 144/475 (30%), Positives = 238/475 (50%), Gaps = 4/475 (0%) Frame = +1 Query: 1450 SGGGSQPKLAPKLSMRVCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRT 1629 S GG+ +P MRV WNC+GLG P TV +L+E +++ D++FL ETK++ + R Sbjct: 352 SRGGAGTTTSP---MRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRD 408 Query: 1630 VCKQLKLGDRWKNLDPIGKSGGLLIAWAE--SIQM--HQVLISSFCIEAEFSRDGDNEKR 1797 + ++ D + P G SGGL++ W + SIQ+ H V + +E + N Sbjct: 409 LGVKMGFEDMCI-ISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYK------NFNF 461 Query: 1798 WAVFVYASTNERERGLQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVR 1977 + +Y ER W+ L W + GDFN+I + EK+GGR RS S Sbjct: 462 YLSCIYGHPIPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQN 521 Query: 1978 FNNFIRDMGMQEIPLLGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRM 2157 F N I M+++ G ++W R E +E LDRVF + +W FP + Sbjct: 522 FTNMINCCNMKDLKSKGNPYSWVGKRQNET-IESCLDRVFINSDWQASFPAFETEFLPIA 580 Query: 2158 SSDHCLIFLNEFEEVNKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVK 2337 SDH + ++ EEV KR + F++DRR E D +++ W+ ++ + K+ Sbjct: 581 GSDHAPVIIDIAEEVCTKRGQ-FRYDRRHFQFEDFVDSVQRGWNRG-RSDSHGGYYEKLH 638 Query: 2338 NCRIELLKWNSAKQLNSASQVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIF 2517 CR EL KW + N+A ++ L +++ D RL+ +L+QAY +EE++ Sbjct: 639 CCRQELAKWKRRTKTNTAEKIETLKYRVDAAER-DHTLPHQTILRLRQDLNQAYRDEELY 697 Query: 2518 WQQKSRVNWLKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSN 2697 W KSR W+ GD+NT +F+A T R+ N I + G + I K +++++ Sbjct: 698 WHLKSRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFAD 757 Query: 2698 LFTSESQPGISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 LFT+ + GI ++ ++NH L+ +++ E++ A+F + +APG DG Sbjct: 758 LFTTTQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDG 812 Score = 67.4 bits (163), Expect = 4e-08 Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 2/222 (0%) Frame = +2 Query: 137 MAQELTKKLQGFTLSDTERRGIELEERDVEVSKEECIRSLFGKVLGNKKVNFTGLKNTMN 316 MA + + LQ L E + L + V+ + ++ L G+ L + N + T+ Sbjct: 1 MADNVRRALQNINLGIDETP-VALPQAIVQRAVDDNRFCLLGRPLMPRNQNLRQILTTVP 59 Query: 317 GIWPIDEPCALREIGFNKFQFIFQSLGDKKRVIQGKLWSFDNQFLVMREWKEGVDMKKEN 496 W + R I +FQFIF S V++ WSF ++ LV+ W DM Sbjct: 60 RTWGLVGFVRGRIIQNRRFQFIFPSEESLDTVLRRGPWSFADRMLVVERWTP--DMDPLV 117 Query: 497 FSFIDMWIQVWDLPAHWISSEVGLKIGRLFSATRDVFIPETGSIKGRYLKINVPVEIEKP 676 +FI WIQV ++P +++ EV I + V + + +++I + ++ P Sbjct: 118 LNFIPFWIQVREIPLQFLNLEVIDNIAGSLGERKAVDFDPFTTTRVEFVRIQIKWDVNHP 177 Query: 677 L--LRGTTLTLKGETHWVSFKYENLIGCCFYCGWIGHHERMC 796 L R +L G +SF YE L G C CG + H C Sbjct: 178 LRFQRNYQFSL-GVNTVLSFYYERLRGFCDVCGRMTHDAGSC 218 >gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] Length = 1270 Score = 221 bits (563), Expect = 2e-54 Identities = 129/406 (31%), Positives = 205/406 (50%), Gaps = 3/406 (0%) Frame = +1 Query: 1654 DRWKNLDPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNER 1833 D+ ++P+GK GGL + W S+Q+ + ++A+ N VY + Sbjct: 17 DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVNF--CVSCVYGDPDRS 74 Query: 1834 ERGLQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQE 2013 +R W+ + V W + GDFNDI N EK GG RS FN I+ + E Sbjct: 75 KRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVE 134 Query: 2014 IPLLGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEF 2193 +P G FTWA R G+ +++ +LDR FG+ EW FP + SDH + + Sbjct: 135 MPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLM 193 Query: 2194 EEVNKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSA 2373 + R + F+FD+R++ +E ++ I + WS G + V +++ CR L W Sbjct: 194 SSQDSYRGQ-FRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQ 251 Query: 2374 KQLNSASQVVHLNSSLESLRAMDGDRDWDQWNR---LKAELHQAYNEEEIFWQQKSRVNW 2544 LNS ++ L ++LE +++ W + R LK +L +AY EEE +W+QKSR W Sbjct: 252 NNLNSLDKINQLEAALEKEQSLV----WPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKW 307 Query: 2545 LKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPG 2724 L++G++N+KYFHA Q R I +L NG + +E + +++ NLF S + G Sbjct: 308 LRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSG 367 Query: 2725 ISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + G+ +S +N L+ +S EIK+A+F + P APGPDG Sbjct: 368 FTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDG 413 >gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] Length = 1254 Score = 221 bits (563), Expect = 2e-54 Identities = 129/406 (31%), Positives = 205/406 (50%), Gaps = 3/406 (0%) Frame = +1 Query: 1654 DRWKNLDPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNER 1833 D+ ++P+GK GGL + W S+Q+ + ++A+ N VY + Sbjct: 20 DQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVNF--CVSCVYGDPDRS 77 Query: 1834 ERGLQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQE 2013 +R W+ + V W + GDFNDI N EK GG RS FN I+ + E Sbjct: 78 KRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVE 137 Query: 2014 IPLLGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEF 2193 +P G FTWA R G+ +++ +LDR FG+ EW FP + SDH + + Sbjct: 138 MPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLM 196 Query: 2194 EEVNKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSA 2373 + R + F+FD+R++ +E ++ I + WS G + V +++ CR L W Sbjct: 197 SSQDSYRGQ-FRFDKRFLFKEDVKEAIIRTWSRGKHGTNI-SVADRLRACRKSLSSWKKQ 254 Query: 2374 KQLNSASQVVHLNSSLESLRAMDGDRDWDQWNR---LKAELHQAYNEEEIFWQQKSRVNW 2544 LNS ++ L ++LE +++ W + R LK +L +AY EEE +W+QKSR W Sbjct: 255 NNLNSLDKINQLEAALEKEQSLV----WPIFQRVSVLKKDLAKAYREEEAYWKQKSRQKW 310 Query: 2545 LKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPG 2724 L++G++N+KYFHA Q R I +L NG + +E + +++ NLF S + G Sbjct: 311 LRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSG 370 Query: 2725 ISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + G+ +S +N L+ +S EIK+A+F + P APGPDG Sbjct: 371 FTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDG 416 >pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana] Length = 1333 Score = 221 bits (562), Expect = 2e-54 Identities = 141/460 (30%), Positives = 226/460 (49%), Gaps = 3/460 (0%) Frame = +1 Query: 1492 MRVCVWNCRGLGGPS--TVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLG-DRW 1662 M + WNC+GLG T+ +L E H P+++FL ETK V V Q LG +R Sbjct: 1 MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETKNCSNVV--VDLQEWLGYERV 58 Query: 1663 KNLDPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERG 1842 ++PIG SGGL + W + + + I+ F + + + VY + ++ Sbjct: 59 FTVNPIGLSGGLALFWKKGVDIVIKYADKNLID--FQIQFGSHEFYVSCVYGNPAFSDKH 116 Query: 1843 LQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPL 2022 L W+ + + W + GDFN I N EKRGG R SF+ F + + M E+P Sbjct: 117 LVWEKITRIGINRKEPWCMLGDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPS 176 Query: 2023 LGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEV 2202 +G FTW ++ E +++ +LDR FG+ W FP + + + SDH + + + Sbjct: 177 IGNPFTWGG-KTNEMWIQSRLDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVR-LTKT 234 Query: 2203 NKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQL 2382 ++ F+FD+R +Q ++ I +AW+ + N V K+K+CR L +W + Sbjct: 235 KEEYRGNFRFDKRLFNQPNVKETIVQAWN-GSQRNENLLVLDKLKHCRSALSRWKKENNI 293 Query: 2383 NSASQVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDK 2562 NS++++ ++LE L G D LK +L +A ++EE+FW QKSR W+ +GDK Sbjct: 294 NSSTRITQARAALE-LEQSSGFPRADLVFSLKNDLCKANHDEEVFWSQKSRAKWMHSGDK 352 Query: 2563 NTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLH 2742 NT +FHA R I QL NG EM +++S+LF S Sbjct: 353 NTSFFHASVKDNRGKQHIDQLCDVNGLFHKDEMNKGAIAEAYFSDLFKSTDPSSFVDLFE 412 Query: 2743 GIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 ++ +N+ LI +S+ EI++A+F + APG DG Sbjct: 413 DYQPRVTESMNNTLIAAVSKNEIREAVFAIRSSSAPGVDG 452 >gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa] Length = 1656 Score = 217 bits (553), Expect = 2e-53 Identities = 126/446 (28%), Positives = 224/446 (50%) Frame = +1 Query: 1525 GGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDPIGKSGGLLI 1704 GG T L+ K H P+++FL ET+++ ++ + LK D +DPI GL + Sbjct: 619 GGGKT---LRRICKKHNPEILFLMETRQQEGIIKEWKRNLKFTDHHV-VDPIATGRGLAL 674 Query: 1705 AWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWDYLLHARVKWG 1884 W +++Q+ + S ++ S D ++Y + ++ E+ W + Sbjct: 675 FWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRFPVQS 734 Query: 1885 ANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEFTWANNRSGE 2064 W + GDFN++ EK GG W F +F+ + ++++ G F+W R G Sbjct: 735 LPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGR 794 Query: 2065 GYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRHKRFQFDRRW 2244 +++E+LDR G++ W P T + ++ SDH + L+ ++ K + F+F++ W Sbjct: 795 VFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKT-RLFRFEQMW 853 Query: 2245 VDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLNSASQVVHLNSSLE 2424 E D+I+++W G+AM + + +C L W+ K N + QV L S +E Sbjct: 854 TTHEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIE 913 Query: 2425 SLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNTKYFHAVTNQRRM 2604 L + Q N L ++ + + ++E++W Q+SRVNWLK GD+N+ +FH T QRR Sbjct: 914 KLHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQ 973 Query: 2605 TNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHGIPQSISPELNHRL 2784 N I +L ++G +E ++ + +++ L+ S L + +++ E+N L Sbjct: 974 YNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKIL 1033 Query: 2785 ILPISEAEIKQALFDLHPHKAPGPDG 2862 P+S E+K+A+FDL KAPGPDG Sbjct: 1034 SSPVSLLEVKKAVFDLGATKAPGPDG 1059 >ref|XP_006485550.1| PREDICTED: uncharacterized protein LOC102627687 [Citrus sinensis] Length = 473 Score = 216 bits (551), Expect = 4e-53 Identities = 126/463 (27%), Positives = 230/463 (49%), Gaps = 7/463 (1%) Frame = +1 Query: 1507 WNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNL---DP 1677 W+CRGLG P TV L + K PD +FL ET + + +++LG + L + Sbjct: 6 WSCRGLGHPRTVQVLADLAKNKKPDFIFLMETLSDRDRLNGI--KIRLG--YVGLCVVEK 61 Query: 1678 IGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKR--WAVFVYASTNERERGLQ- 1848 +G+SGGL + W + +H + I+ +N KR W + E R + Sbjct: 62 VGRSGGLALFWKTNYNVHLLKFGRNVIDVAM----ENTKRVKWRTTCFYGFPESSRCRES 117 Query: 1849 WDYLLHA-RVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLL 2025 W+ L + + W + GDFND+ ++ EKRG V W F + + D+G+ ++ + Sbjct: 118 WNLKLRSLALSSYFPWVVLGDFNDLLNSTEKRGKLVHPNWKLQGFKDVVSDLGLHDLGME 177 Query: 2026 GEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVN 2205 G +FTW ++ + ++EE+LD S+ W FP+ V + SDH IF + V Sbjct: 178 GYQFTWEMSKGNKNWLEERLDHGLASINWIRLFPQAKVSSLKASCSDHLHIFFDPNPLVY 237 Query: 2206 KKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLN 2385 + R K+F+F+ W+ + + +++ +W+ + GN + K+ C +LL+W S + Sbjct: 238 QSRVKKFRFENLWLCEPDCQPIVQDSWASS--GNV--SIQSKINACGSDLLRWGSYLSRD 293 Query: 2386 SASQVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKN 2565 ++ + LR + + + ++ + EIFW+Q+S+ WLK GD N Sbjct: 294 FHKRIRDCKQRIGVLRGLRDVVSLGDFTEARNRYNELLHSHEIFWKQRSKSLWLKEGDLN 353 Query: 2566 TKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHG 2745 +YFHA+ + R+ N I +L + G C EI + + +++ +F+SE + Sbjct: 354 PRYFHAMASTRKRQNMIGKLRNSKGQWCTDPAEINELIGDYFTKIFSSEG-GSCDEVIQC 412 Query: 2746 IPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDGSLDQ 2874 + + + NH L+ P + A+++ A+F ++P K+P P+GS ++ Sbjct: 413 VEKKLMAGQNHSLMEPFTTADVRDAIFSMYPDKSPVPNGSQER 455 >ref|XP_004980332.1| PREDICTED: uncharacterized protein LOC101786154 [Setaria italica] Length = 720 Score = 214 bits (546), Expect = 2e-52 Identities = 134/469 (28%), Positives = 226/469 (48%), Gaps = 12/469 (2%) Frame = +1 Query: 1492 MRVCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWK-- 1665 M++ WNCRGLG + + L K PD++FL ETK ++ G RWK Sbjct: 1 MKIIAWNCRGLGNGAAIRGLLNVQKEEDPDILFLSETKLDEHRIK--------GLRWKLG 52 Query: 1666 --NL---DPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNE 1830 N+ D +G+SGGL + W + +H IS I+A+ R F Y Sbjct: 53 LTNVVVKDCVGRSGGLALFWRTGVDVHVRWISRLYIDADVQEADSFSWRLTGF-YGEPRT 111 Query: 1831 RERGLQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQ 2010 + L W L W GDFN+I EK GG R RF + + D + Sbjct: 112 ENKHLSWKALRTLNAARRKPWLCLGDFNEILMGAEKEGGLPRGQACMDRFRSALEDCELS 171 Query: 2011 EIPLLGEEFTWANN-RSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLN 2187 ++ G+ FTW NN + YV E+LDR + EW FP V SDH + + Sbjct: 172 DLGFAGDLFTWWNNSHNSNEYVRERLDRAVANEEWRAHFPLYKVINGEPRHSDHRPVVVL 231 Query: 2188 EFEEVN---KKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELL 2358 E+V+ ++ + F+F+ WV++E +++ AW +EG V V++ +L Sbjct: 232 TEEDVHSGARRGGQSFRFEAHWVEEEQCAPIVENAWKTVMEGRRG-TVMEAVQSVATDLG 290 Query: 2359 KWNSAKQLNSASQVVHLNSSLESLRAMD-GDRDWDQWNRLKAELHQAYNEEEIFWQQKSR 2535 WN + ++ L ++E+ R ++ + LK + +++++W+Q+++ Sbjct: 291 DWNRNVLGDLEKRMKQLRKAMEACRRGPINEQSLRRMELLKFRWERLEEQKDLYWRQRAK 350 Query: 2536 VNWLKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSES 2715 +W+ GD+NT +FH ++RR + I +L+ ++G V + E+E +T++Y NLFT+ + Sbjct: 351 AHWVSKGDRNTHFFHQYASERRKRSRIKRLVQDDGRVVEEDGELETLITNYYRNLFTTNA 410 Query: 2716 QPGISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + L + Q +S E+N +L+ +E E++Q L + KAPG DG Sbjct: 411 GDRMDELLQHVKQVVSNEMNDQLLRDFTEEEVRQGLDAIGDLKAPGADG 459 >gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1750 Score = 213 bits (543), Expect = 3e-52 Identities = 136/453 (30%), Positives = 225/453 (49%), Gaps = 5/453 (1%) Frame = +1 Query: 1519 GLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNL---DPIGKS 1689 G+G P T S+L ++++ D++FL ET + VCK L + N+ P G+S Sbjct: 391 GIGMPLTQSRLFRLFRMYNYDILFLVETLNQ---CDKVCK-LAYDLGFPNVITQPPNGRS 446 Query: 1690 GGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWDYLLHA 1869 GGL + W ++ + + I++ + + N+ + VY + ER W L H Sbjct: 447 GGLALMWKNNVSLSLISQDERLIDSHVTFN--NKSFYLSCVYGHPTQSERHQLWQTLEHI 504 Query: 1870 RVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEFTWAN 2049 A W L GDFN+I SN EK GG +R W+F F N + ++++ G+ F+W Sbjct: 505 SDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVG 564 Query: 2050 NRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRHKRFQ 2229 R V+ LDRVF + W FP ++ SDH + ++ F E +R K F+ Sbjct: 565 ERHTHT-VKCCLDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVH-FNESFPRRSKLFR 622 Query: 2230 FDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLNSASQVVHL 2409 FD R +D + +++ +W N + + ++ +CR + + A LNS ++ L Sbjct: 623 FDNRLIDIPTFKRIVQTSWRTNRNSRST-PITERISSCRQAMARLKHASNLNSEQRIKKL 681 Query: 2410 NSSLESLRAMDGDRDWDQW--NRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNTKYFHA 2583 SSL RAM+ R D+ +L+ L +A+++EEI+W+QKSR W+K GD+NT YFHA Sbjct: 682 QSSLN--RAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHA 739 Query: 2584 VTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHGIPQSIS 2763 T R N ++ ++ + G + + EI F++N+F++ +++ Sbjct: 740 CTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVT 799 Query: 2764 PELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 +N L S+ EI A+ + KAPGPDG Sbjct: 800 NTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDG 832 Score = 67.8 bits (164), Expect = 3e-08 Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 13/220 (5%) Frame = +2 Query: 176 LSDTERRGIE-----LEERDVEVSKEECIR-------SLFGKVLGNKKVNFTGLKNTMNG 319 +SD R+ ++ +++ V ++ E C + SL + +K N L M Sbjct: 1 MSDRLRKSVQDLNLGIDDEPVALTSEFCSQAAYVNRFSLVVTTVNPRKQNLRALIGQMPR 60 Query: 320 IWPIDEPCALREIGFNKFQFIFQSLGDKKRVIQGKLWSFDNQFLVMREWKEGVDMKKENF 499 +W + C R I + QF FQS V++ WSF++ L + W ++ + Sbjct: 61 VWGFPDSCVGRIIDKGRVQFKFQSEEAMNLVLRRGPWSFNDWMLSIHRWYP--NLSEAEM 118 Query: 500 SFIDMWIQVWDLPAHWISSEVGLKIGRLFSATRDVFIPETGSIKGRYLKINVPVEIEKPL 679 I W+Q+ +P ++++ + +G DV E + G ++++ + ++ PL Sbjct: 119 KIIPFWVQITGIPLLFLTNAMARCVGNRLGHVADVDFDENSNHTG-FVRVRINWNLDDPL 177 Query: 680 -LRGTTLTLKGETHWVSFKYENLIGCCFYCGWIGHHERMC 796 + GE + F++E L C CG + H ++C Sbjct: 178 RFQRNFQFADGENTVIKFRFERLRNFCTKCGSLKHDIKVC 217 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 210 bits (534), Expect = 4e-51 Identities = 131/466 (28%), Positives = 225/466 (48%), Gaps = 14/466 (3%) Frame = +1 Query: 1507 WNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDPIG- 1683 WNCRG+G PS +S L+ P +VFL ETK K + +V K+LK W+++ + Sbjct: 7 WNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLK----WEHMVAVDC 62 Query: 1684 ------KSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWA-VFVYASTNERERG 1842 + GGL + W I++ + +SS I+ + E R+ ++ Y +++ Sbjct: 63 EGECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKT 122 Query: 1843 LQWDYLLHARVKWGAN-WFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIP 2019 LL A + W GDFN + EK+GG ++ F N + + ++ Sbjct: 123 ---GALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLG 179 Query: 2020 LLGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLN---- 2187 +G EFTW NNR G+ ++E+LDR + W +KFP + V + SDH I + Sbjct: 180 FVGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGA 239 Query: 2188 EFEEVNKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWN 2367 + K+ KRF+F+ W+ + +++++K+ W + + +LL W+ Sbjct: 240 QSAATRTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGI------NLARTANKLLSWS 293 Query: 2368 SAKQLNSASQVVHLNSSLESLRAMDGDRDWDQWNR-LKAELHQAYNEEEIFWQQKSRVNW 2544 K + A ++ ++ L + D R L A + + EE++W Q+SR +W Sbjct: 294 KQKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDW 353 Query: 2545 LKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPG 2724 +K+GDKNTK+FH + R N + ++ +E G E ++ + ++ NLF S + Sbjct: 354 IKSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCE 413 Query: 2725 ISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + L+ + I+ EL +L P E+ AL +HP+KAPGPDG Sbjct: 414 MDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPNKAPGPDG 459 >emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana] gi|7267666|emb|CAB78094.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana] Length = 1274 Score = 209 bits (532), Expect = 6e-51 Identities = 129/422 (30%), Positives = 200/422 (47%) Frame = +1 Query: 1597 ETKKKYAFVRTVCKQLKLGDRWKNLDPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSR 1776 ETK + F+ + R+ + P G SGGL + W E++++ + + I+ Sbjct: 2 ETKNQDEFISKTFDWMGYAHRF-TIPPEGLSGGLALYWKENVEVEILEAAPNFID----- 55 Query: 1777 DGDNEKRWAVFVYASTNERERGLQWDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVR 1956 R + WD + + + W L GDFNDI N EK+GG +R Sbjct: 56 -------------------NRSVFWDKISSLGAQRSSAWLLTGDFNDILDNSEKQGGPLR 96 Query: 1957 SAWSFVRFNNFIRDMGMQEIPLLGEEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTT 2136 F+ F +F+ G+ +I G +W R +++ +LDR G+ W FP + Sbjct: 97 WEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRYSH-FIKSRLDRALGNCSWSELFPMSK 155 Query: 2137 VQAFFRMSSDHCLIFLNEFEEVNKKRHKRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMY 2316 + SDH + + F KR K F+FDRR ++E L+K+ W + + + +Y Sbjct: 156 CEYLRFEGSDHRPL-VTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELARQDSVLY 214 Query: 2317 QVHHKVKNCRIELLKWNSAKQLNSASQVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQA 2496 K+ CR ++KW + NSA + +LES + D D + EL A Sbjct: 215 ----KISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSADIP-DPSLIGSITQELEAA 269 Query: 2497 YNEEEIFWQQKSRVNWLKAGDKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKE 2676 Y +EE+FW+Q SRV WL +GD+N YFHA T RRM N +S + +G E +I Sbjct: 270 YRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIAST 329 Query: 2677 VTSFYSNLFTSESQPGISSQLHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGP 2856 ++S++ N+FT+ + + + IS N LI S EIK+ALF + KAPGP Sbjct: 330 ISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSISADKAPGP 389 Query: 2857 DG 2862 DG Sbjct: 390 DG 391 >emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1355 Score = 208 bits (529), Expect = 1e-50 Identities = 139/463 (30%), Positives = 219/463 (47%), Gaps = 6/463 (1%) Frame = +1 Query: 1492 MRVCVWNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNL 1671 M + WNCRGLG P +V QL+ PD++F+ ET V + L + + + Sbjct: 1 MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAF-GV 59 Query: 1672 DPIGKSGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWA-VFVYASTNERERGLQ 1848 +G++GGL + W E + V S I + D K+W V VY E E+ L Sbjct: 60 ASVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVE---DGNKKWRFVGVYGWAKEEEKHLT 116 Query: 1849 WDYLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLG 2028 W L H L GDFN+I S EK GG R + F + + + ++++ +G Sbjct: 117 WSLLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVG 176 Query: 2029 EEFTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNK 2208 +TW RS + E+LDR S W +P + + R SDH I L + + Sbjct: 177 TWYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRS-QRAGR 235 Query: 2209 KRHK--RFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQL 2382 R K R F+ W+ + E +++++W N EG M + C L++W++ K Sbjct: 236 PRGKTRRLHFETSWLLDDECEAVVRESWE-NSEGEVMTGRVASMGQC---LVRWSTKKFK 291 Query: 2383 NSASQVVHLNSSLESLRAMD-GDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGD 2559 N + Q+ +L + + + L+ +L + + + E +W +SRV +K GD Sbjct: 292 NLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKDGD 351 Query: 2560 KNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQ- 2736 KNTKYFH +QR+ N + L G IE TS++S++FTS + +S + Sbjct: 352 KNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSDLSLEA 411 Query: 2737 -LHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 + I ++ E N +L+ P S+ EI AL +HP KAPGPDG Sbjct: 412 VMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDG 454 >ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca subsp. vesca] Length = 1687 Score = 207 bits (526), Expect = 3e-50 Identities = 140/462 (30%), Positives = 220/462 (47%), Gaps = 10/462 (2%) Frame = +1 Query: 1507 WNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDPIGK 1686 WN RGLG P T LK+ + PDLVFL ETKKK + +C L ++ +GK Sbjct: 6 WNVRGLGNPHTFRALKKFLRAKDPDLVFLMETKKKKQEMANICFDLG----FEGCSVVGK 61 Query: 1687 ----SGGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWD 1854 SGGL + W +++ V S I+ G + Y + + + R WD Sbjct: 62 VGFSSGGLAMCWKNKMEVRPVGSSQGHIDVAVLFKGQVIR--VTGFYGNPDSQLRHFSWD 119 Query: 1855 YLLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEE 2034 L W + GDFN++ +KRGG R RF + + G+QE+ G Sbjct: 120 LLRRIAKSVRGPWIVFGDFNELLCIGDKRGGGERPEAQIRRFREAVDECGLQEVEFSGPT 179 Query: 2035 FTWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHC-LIFLNEFEEVNKK 2211 FTW G + E+LDR F + E + FP+ +SDH L+ +E +K Sbjct: 180 FTWKR-----GTLLERLDRCFINEEAGVLFPRFHEAHVDVGASDHLSLVLFSEGLNCGRK 234 Query: 2212 RH----KRFQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQ 2379 +RFQF+ W ++ ++ ++ AW +GN + V K+ EL +WN K Sbjct: 235 GGWKGLRRFQFEPFWAKEQESKQVVADAWQS--DGNQLNNVRAKLAGVSKELQRWNENKF 292 Query: 2380 LNSASQVVHLNSSLESLRAMDGDRD-WDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAG 2556 ++ LN LE D ++ N + AEL+++ EE W+Q+SR+NWL+ G Sbjct: 293 GLIPKKIRQLNKELEQCPFDSSDEVVQNRRNAIVAELNKSLEIEESIWRQRSRINWLQEG 352 Query: 2557 DKNTKYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQ 2736 D+NTK+FH R N + ++S G E EI++ + +S LFTSE + Sbjct: 353 DRNTKFFHGFAKGRGRKNRVLGIMSSTGEWIEQETEIQQAFNTHFSQLFTSEGCDHMELV 412 Query: 2737 LHGIPQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 L + + ++ ++N +L P ++ +I +AL + P K+PG DG Sbjct: 413 LDTVQRKVTDDMNAKLNKPFTKLDIDEALKQMGPDKSPGEDG 454 >dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1197 Score = 206 bits (524), Expect = 5e-50 Identities = 150/461 (32%), Positives = 226/461 (49%), Gaps = 9/461 (1%) Frame = +1 Query: 1507 WNCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKN--LDPI 1680 WNC+G+G P TV +++E K PD++FL ET + V K+L R+ + + P Sbjct: 3 WNCQGIGNPKTVRRVREILKKLSPDVIFLMETMNQD---EVVLKKLDFLKRYNHFLVSPS 59 Query: 1681 GKS-GGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWDY 1857 G+ GGL + W ++M V I+A S A +VY + ++G W+ Sbjct: 60 GQGKGGLALFWKHDVEMAIVSSCDNFIDARVSFK--RISFLATYVYGEPEQSKKGATWEK 117 Query: 1858 LLHARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEF 2037 L WFL GDFN+I N EK G R+ SFV F +F+ + G+ ++ LG Sbjct: 118 LKCLADNREEPWFLTGDFNEILDNSEKSEGPPRAEGSFVEFRSFMSECGLFDLKHLGNSL 177 Query: 2038 TWANNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRH 2217 +W R V +LDR + F + S+H I F +K+R Sbjct: 178 SWRGVRHTH-LVRARLDRAMSNGACLELFSRGRCDYRKFEGSNHRPIIT--FLRQDKQRK 234 Query: 2218 KR-FQFDRRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLNSAS 2394 K F++DRR + E +DLI AW+ ++ + V K+ CR ++ W Q NS Sbjct: 235 KGLFRYDRRLKENEEIKDLIAAAWNEDLSDS----VEKKLSRCRRAIISWTKETQRNSQK 290 Query: 2395 QVVHLNSSLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNTKY 2574 + L LE + + D ++ +EL AY EE FW+Q+SR NWL GD+N+ Y Sbjct: 291 IIEALKVKLEQAMVIPVN-DVCLLVQINSELSAAYLAEEAFWKQRSRQNWLSLGDQNSGY 349 Query: 2575 FHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSE-SQPGISSQLHGIP 2751 FHAVT R N +S ++ G + + + +++ Y LFTS+ S P S++ + Sbjct: 350 FHAVTKGRSCLNNLSVRETDLGEKVFEDSQFAEVISTCYQALFTSQLSNPEEISRI--VQ 407 Query: 2752 QSISP----ELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 +S+ P E N LI S EIK+ALF++HP KAPG DG Sbjct: 408 ESVHPKVIEEENDFLISIPSAMEIKEALFNVHPDKAPGYDG 448 >gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 206 bits (524), Expect = 5e-50 Identities = 134/458 (29%), Positives = 221/458 (48%), Gaps = 7/458 (1%) Frame = +1 Query: 1510 NCRGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDPIGKS 1689 NCRGLG +TV +L+ K P LVFL ETK + R + L + + G S Sbjct: 12 NCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQARNLMWSLGFSGSFA-VSCEGLS 70 Query: 1690 GGLLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAV-FVYASTNERERGLQWDYLLH 1866 GGL + W + + +S I+ S + W + FVY R W+ L Sbjct: 71 GGLALFWTTAYTVSLRGFNSHFIDVLVSTE--ELPPWRISFVYGEPKRELRHFFWNLLRR 128 Query: 1867 ARVKWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEFTWA 2046 +W W GDFN++ E G R RS F + + D G+ ++ +G +FTW+ Sbjct: 129 LHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSCLDDCGLIDLGFVGPKFTWS 188 Query: 2047 NNRSGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRH--- 2217 N + + +LDR + E+ F V+ SSDH I ++ + +R Sbjct: 189 NKQDANSNSKVRLDRAVANGEFSRYFEDCLVENVITTSSDHYAISIDLSRRNHGQRRIPI 248 Query: 2218 -KRFQFDRRWVDQEGAEDLIKKAWSINVEGNA-MYQVHHKVKNCRIELLKWNSAKQLNSA 2391 + F+F+ W+ E ++++ +W I+ G + V ++ + L W+ A + Sbjct: 249 QQGFRFEAAWLRAEDYREVVENSWRISSAGCVGLRGVWSVLQQVAVSLKDWSKASFGSVR 308 Query: 2392 SQVVHLNSSLESLRAMD-GDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNT 2568 +++ + L+SLR D + ++ +L + + +EEI +Q+SRV+WL+ GD+NT Sbjct: 309 RKILKMERKLKSLRQSPVNDVVIQEEKLIEQQLCELFEKEEIMARQRSRVDWLREGDRNT 368 Query: 2569 KYFHAVTNQRRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHGI 2748 +FHA + RR TN I +L+ ++G+ C+++ I++ FY NLF+SE + L I Sbjct: 369 AFFHARASARRRTNRIKELVRDDGSRCISQEGIKRMAEVFYENLFSSEPCDSMEEVLDAI 428 Query: 2749 PQSISPELNHRLILPISEAEIKQALFDLHPHKAPGPDG 2862 P + +N L + EIK ALF + KAPGPDG Sbjct: 429 PNKVGDFINGELGKQYTNEEIKTALFQMGSTKAPGPDG 466 >ref|XP_006345318.1| PREDICTED: uncharacterized protein LOC102581842 [Solanum tuberosum] Length = 278 Score = 205 bits (522), Expect = 9e-50 Identities = 96/245 (39%), Positives = 147/245 (60%) Frame = +2 Query: 137 MAQELTKKLQGFTLSDTERRGIELEERDVEVSKEECIRSLFGKVLGNKKVNFTGLKNTMN 316 M +E+ ++L FTL++ E+ + +E DV S +C SLFGKV+ +KKV+ G+KNTM Sbjct: 1 MTEEIIERLHQFTLTEEEKETVSIEISDVLSSTNDCEVSLFGKVVSDKKVDLQGVKNTMP 60 Query: 317 GIWPIDEPCALREIGFNKFQFIFQSLGDKKRVIQGKLWSFDNQFLVMREWKEGVDMKKEN 496 W ++EIG+N FQF F+ +V+ G W +D L ++ W+ G+ Sbjct: 61 VAWGNPTGLQIKEIGWNFFQFKFKDKEGMNKVLFGTPWLYDKFLLNIQIWEPGLKSTSSI 120 Query: 497 FSFIDMWIQVWDLPAHWISSEVGLKIGRLFSATRDVFIPETGSIKGRYLKINVPVEIEKP 676 F+ ++W+QVW++P HW+S +VG KIG D+ IPE GS +G+Y++ + I KP Sbjct: 121 FNVCELWVQVWNIPLHWMSMDVGRKIGNALGGIVDIVIPENGSKEGQYIRPKARMNITKP 180 Query: 677 LLRGTTLTLKGETHWVSFKYENLIGCCFYCGWIGHHERMCEERKFDIQNNNLREGRYGDW 856 L RG + L ET WV YENL C+YCG +GH+E+ C R D+Q+ ++ ++G W Sbjct: 181 LPRGKLIKLGSETTWVEISYENLPYVCYYCGLLGHNEKTCAHRAKDVQDGTVKTDQFGIW 240 Query: 857 LKAED 871 LKAE+ Sbjct: 241 LKAEN 245 >gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1833 Score = 204 bits (519), Expect = 2e-49 Identities = 128/434 (29%), Positives = 213/434 (49%), Gaps = 2/434 (0%) Frame = +1 Query: 1567 LHLPDLVFLCETKKKYAFVRTVCKQLKLG-DRWKNLDPIGKSGGLLIAWAESIQMHQVLI 1743 +H P +VFL ET++ V Q ++G R ++ +GK GGL + W ES+ + Sbjct: 9 IHRPKIVFLAETRQDQYMV-----QNRIGLRRCFTVNGVGKGGGLALFWDESMNVVLKSY 63 Query: 1744 SSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWDYLLHARVKWGANWFLAGDFNDIC 1923 +S I+ + R A FVY ++R L W L R G W + GDFN+ Sbjct: 64 NSRHIDVLITELDCCTWR-ATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAM 122 Query: 1924 SNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEFTWANNRSGEGYVEEKLDRVFGS 2103 E + R RS F + + + +I G +T+ N + V+ +LDR S Sbjct: 123 WQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGRNVKVRLDRGVAS 182 Query: 2104 VEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRHKRFQFDRRWVDQEGAEDLIKKA 2283 W +FP+ + SSDH + L E + K +++ W + ++I++A Sbjct: 183 PAWSSRFPQAVITHLTTPSSDHAPLLLEREETTLARPMKIMRYEEVWERESSLPEVIQEA 242 Query: 2284 WSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLNSASQVVHLNSSLESLRAMDGDRDWD- 2460 W++ + + + ++ K+K +L+ W+ K N ++ L L LR + G D D Sbjct: 243 WTMGADASTLGDINDKMKVTMTKLVSWSKDKIGNVRKKIKDLREKLGELRNI-GLLDTDN 301 Query: 2461 QWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNTKYFHAVTNQRRMTNGISQLISENG 2640 + + +K EL + + EEI+W+Q+SR+ WLK GD NT+YFH + R N I +L +G Sbjct: 302 EVHSVKKELEEMLHREEIWWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDG 361 Query: 2641 AVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHGIPQSISPELNHRLILPISEAEIKQA 2820 + + + E+++ SF+ L+T + + L+ + IS ++N LI P + EI A Sbjct: 362 STTMNKKEMKEINRSFFQQLYTKDDNLNPVNLLNMFHEKISEQMNADLIKPFTNEEISDA 421 Query: 2821 LFDLHPHKAPGPDG 2862 LF + P KAPGPDG Sbjct: 422 LFQIGPLKAPGPDG 435 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 202 bits (514), Expect = 8e-49 Identities = 129/449 (28%), Positives = 214/449 (47%) Frame = +1 Query: 1516 RGLGGPSTVSQLKESWKLHLPDLVFLCETKKKYAFVRTVCKQLKLGDRWKNLDPIGKSGG 1695 +G+G P T SQL K+ D++FL ET K + + L + P G SGG Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQ-PPQGHSGG 428 Query: 1696 LLIAWAESIQMHQVLISSFCIEAEFSRDGDNEKRWAVFVYASTNERERGLQWDYLLHARV 1875 L + W +S+++ + I+ S + N + VY + ER W + + Sbjct: 429 LALLWKDSVRLSNLYQDDRHIDVHISINNINF--YLSRVYGHPCQSERHSLWTHFENLSK 486 Query: 1876 KWGANWFLAGDFNDICSNLEKRGGRVRSAWSFVRFNNFIRDMGMQEIPLLGEEFTWANNR 2055 W L GDFN+I SN EK GG R W+F F N + +++I +G+ F+W R Sbjct: 487 TRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGER 546 Query: 2056 SGEGYVEEKLDRVFGSVEWCLKFPKTTVQAFFRMSSDHCLIFLNEFEEVNKKRHKRFQFD 2235 V+ LDR F + E FP ++ SDH +FL+ E+ ++ + F+FD Sbjct: 547 HSHT-VKCCLDRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLS-LEKTETRKMRPFRFD 604 Query: 2236 RRWVDQEGAEDLIKKAWSINVEGNAMYQVHHKVKNCRIELLKWNSAKQLNSASQVVHLNS 2415 +R ++ + +K W+ + G + + +V+ CR + K LNS ++ L + Sbjct: 605 KRLLEVPHFKTYVKAGWNKAINGQRKH-LPDQVRTCRQAMAKLKHKSNLNSRIRINQLQA 663 Query: 2416 SLESLRAMDGDRDWDQWNRLKAELHQAYNEEEIFWQQKSRVNWLKAGDKNTKYFHAVTNQ 2595 +L+ + + + ++ EL AY +EE +WQQKSR W+K GD+NT++FHA T Sbjct: 664 ALDKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKT 723 Query: 2596 RRMTNGISQLISENGAVCVTEMEIEKEVTSFYSNLFTSESQPGISSQLHGIPQSISPELN 2775 R N + + E G + + EI F++ ++ S +P G ++ ++N Sbjct: 724 RFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQIN 783 Query: 2776 HRLILPISEAEIKQALFDLHPHKAPGPDG 2862 L +S+ EI A+ + KAPGPDG Sbjct: 784 DDLTKDLSDLEIYNAICHIGDDKAPGPDG 812 Score = 60.1 bits (144), Expect = 6e-06 Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 10/217 (4%) Frame = +2 Query: 251 SLFGKVLGNKKVNFTGLKNTMNGIWPIDEPCALREIGFNKFQFIFQSLGDKKRVIQGKLW 430 SL + +K N L M +W + + C R +G + QF F++ V+Q W Sbjct: 38 SLIVTTVNPRKQNLRALIGQMPRVWGLVDSCVGRIVGNGRVQFKFRNEESMNLVLQRGPW 97 Query: 431 SFDNQFLVMREWKEGVDMKKENFSFIDMWIQVWDLPAHWISSEVGLKIGRLFSATRDVFI 610 SF++ L + W + + I W+Q+ +P ++++ + +G DV Sbjct: 98 SFNDWMLSVHRWFPNI--TEGEMKIIPFWVQIQGIPILYLTNAMARVVGSRLGYVTDVDF 155 Query: 611 PETGSIKGRYLKINVPVEIEKPL-LRGTTLTLKGETHWVSFKYENLIGCCFYCGWIGHHE 787 E + G ++++ + + L + + E + F++E L C CG + H Sbjct: 156 DENANQMG-FVRVKLAWNFDDHLRFQRNFQFQENENTIIKFRFERLRNFCTKCGSLKHDV 214 Query: 788 RMCE---------ERKFDIQNNNLREGRYGDWLKAED 871 + C D ++N +G D + AED Sbjct: 215 KECNLSFEEYVPVNVNDDNDDDNHDQGHDEDDMAAED 251