BLASTX nr result

ID: Rehmannia24_contig00005716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00005716
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355409.1| PREDICTED: transcription factor TCP2-like is...    60   2e-07
ref|XP_006355408.1| PREDICTED: transcription factor TCP2-like is...    60   2e-07
ref|XP_006468037.1| PREDICTED: transcription factor TCP2-like is...    58   1e-06
ref|XP_002305700.2| hypothetical protein POPTR_0004s06440g [Popu...    58   1e-06
ref|XP_006449018.1| hypothetical protein CICLE_v10014986mg [Citr...    57   3e-06

>ref|XP_006355409.1| PREDICTED: transcription factor TCP2-like isoform X2 [Solanum
           tuberosum]
          Length = 405

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = -3

Query: 260 TTSFTELLXXXXXXXXXXXXXXSVHQNHNNSDGTTNESNFFLKSPRHWSSTPMDYFTSGL 81
           ++SFTELL                  + NN+  T+   N    +PR WS+ P++YFTSGL
Sbjct: 220 SSSFTELLTGG--------------MSDNNNSNTSPNGNIHQNTPRQWSTNPLEYFTSGL 265

Query: 80  LGPPATR-----SGQMHLA--ANPFTSVASPLF 3
           LGP ATR     SGQ++L     P   V+SP+F
Sbjct: 266 LGPSATRGIDNSSGQIYLGNPLQPLRPVSSPMF 298


>ref|XP_006355408.1| PREDICTED: transcription factor TCP2-like isoform X1 [Solanum
           tuberosum]
          Length = 425

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
 Frame = -3

Query: 260 TTSFTELLXXXXXXXXXXXXXXSVHQNHNNSDGTTNESNFFLKSPRHWSSTPMDYFTSGL 81
           ++SFTELL                  + NN+  T+   N    +PR WS+ P++YFTSGL
Sbjct: 240 SSSFTELLTGG--------------MSDNNNSNTSPNGNIHQNTPRQWSTNPLEYFTSGL 285

Query: 80  LGPPATR-----SGQMHLA--ANPFTSVASPLF 3
           LGP ATR     SGQ++L     P   V+SP+F
Sbjct: 286 LGPSATRGIDNSSGQIYLGNPLQPLRPVSSPMF 318


>ref|XP_006468037.1| PREDICTED: transcription factor TCP2-like isoform X1 [Citrus
           sinensis] gi|568827375|ref|XP_006468038.1| PREDICTED:
           transcription factor TCP2-like isoform X2 [Citrus
           sinensis] gi|568827377|ref|XP_006468039.1| PREDICTED:
           transcription factor TCP2-like isoform X3 [Citrus
           sinensis] gi|568827379|ref|XP_006468040.1| PREDICTED:
           transcription factor TCP2-like isoform X4 [Citrus
           sinensis] gi|568827381|ref|XP_006468041.1| PREDICTED:
           transcription factor TCP2-like isoform X5 [Citrus
           sinensis] gi|568827383|ref|XP_006468042.1| PREDICTED:
           transcription factor TCP2-like isoform X6 [Citrus
           sinensis]
          Length = 504

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
 Frame = -3

Query: 281 SLNPISQTTSFTELLXXXXXXXXXXXXXXSVHQNHNNSDGTT-------NESNFFLKSP- 126
           ++NPISQ++SFTELL                  N+NN+  TT        E NFF K+  
Sbjct: 274 NVNPISQSSSFTELLTGGIGGSV---------NNNNNTSPTTASSQQQNEEPNFFHKATT 324

Query: 125 ---RHWSSTPMDYFTSGLLGPPATRSGQMHLA 39
              R W + PMDYF SGLLGP ++R    HL+
Sbjct: 325 AAVRPWPAAPMDYFNSGLLGPSSSRPPHHHLS 356


>ref|XP_002305700.2| hypothetical protein POPTR_0004s06440g [Populus trichocarpa]
           gi|550340451|gb|EEE86211.2| hypothetical protein
           POPTR_0004s06440g [Populus trichocarpa]
          Length = 473

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
 Frame = -3

Query: 281 SLNPISQTTSFTELLXXXXXXXXXXXXXXSVHQNHNNSDGTTNESNFFLKSP--RHWSST 108
           ++NPISQ ++FTELL              S   N+NN+  + +E+N F K+   R W ST
Sbjct: 245 NINPISQNSTFTELLTGGIGSVSNNNNSNSSSSNNNNA-ASPSEANLFQKAAAARQWLST 303

Query: 107 PMDYFTSGLLGPPATRS 57
           PMDY ++GLLGP ++R+
Sbjct: 304 PMDYISTGLLGPSSSRT 320


>ref|XP_006449018.1| hypothetical protein CICLE_v10014986mg [Citrus clementina]
           gi|567913411|ref|XP_006449019.1| hypothetical protein
           CICLE_v10014986mg [Citrus clementina]
           gi|557551629|gb|ESR62258.1| hypothetical protein
           CICLE_v10014986mg [Citrus clementina]
           gi|557551630|gb|ESR62259.1| hypothetical protein
           CICLE_v10014986mg [Citrus clementina]
          Length = 499

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 18/101 (17%)
 Frame = -3

Query: 281 SLNPISQTTSFTELLXXXXXXXXXXXXXXSVHQNHNNSDGTT-------NESNFFLKSP- 126
           ++NPISQ++SFTELL                  N+NN+  TT        E NFF K+  
Sbjct: 267 NVNPISQSSSFTELLTGGIGGSV---------NNNNNTSPTTASSQQQNEEPNFFHKATT 317

Query: 125 ---RHWSSTPMDYFTSGLLGPPATR-------SGQMHLAAN 33
              R W + PMDYF SGLLGP ++R       SGQ+ L ++
Sbjct: 318 AAVRPWPAAPMDYFNSGLLGPSSSRPPHHHHLSGQIQLGSS 358


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