BLASTX nr result
ID: Rehmannia24_contig00005572
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00005572
(770 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao] 406 e-111
ref|XP_002513521.1| transcription initiation factor iib, putativ... 404 e-110
ref|XP_002277679.1| PREDICTED: transcription initiation factor I... 389 e-106
gb|ABR16853.1| unknown [Picea sitchensis] 385 e-104
ref|XP_004957467.1| PREDICTED: transcription initiation factor I... 384 e-104
dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare] 384 e-104
ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [S... 384 e-104
ref|XP_006660890.1| PREDICTED: transcription initiation factor I... 384 e-104
ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group] g... 384 e-104
ref|XP_002534470.1| transcription initiation factor iib, putativ... 383 e-104
gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma c... 383 e-104
ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Caps... 382 e-104
ref|XP_004304334.1| PREDICTED: transcription initiation factor I... 382 e-104
tpg|DAA40631.1| TPA: hypothetical protein ZEAMMB73_839050 [Zea m... 382 e-104
ref|XP_003578512.1| PREDICTED: transcription initiation factor I... 382 e-104
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi... 382 e-104
ref|NP_001149721.1| transcription initiation factor IIB [Zea may... 382 e-104
ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidop... 382 e-104
dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas] 382 e-104
ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Caps... 381 e-103
>gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]
Length = 312
Score = 406 bits (1044), Expect = e-111
Identities = 200/242 (82%), Positives = 211/242 (87%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
MAD +CP+CKRPTEVVFDHSAGD VC ECGLVLEAHSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MADSFCPDCKRPTEVVFDHSAGDIVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLLADGGLSTVIS PN RWQNR +NPDRSLIQAFKTIATM+DRLG
Sbjct: 61 GPSNPLLADGGLSTVISKPNGSSGDFLTSSLGRWQNRGANPDRSLIQAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVEDQKPLRGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQLE+EMGQ+MEMGTIHAGDFLR FCSHLGM N SEEL
Sbjct: 181 KEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMSNQTVKAAQEAVQKSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_002513521.1| transcription initiation factor iib, putative [Ricinus communis]
gi|223547429|gb|EEF48924.1| transcription initiation
factor iib, putative [Ricinus communis]
Length = 312
Score = 404 bits (1039), Expect = e-110
Identities = 199/242 (82%), Positives = 210/242 (86%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
MAD YCP+CKRPTEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MADTYCPDCKRPTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESADNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLLADGGLSTVIS P RWQNR SNPDRSLIQAFKTIATM+DRLG
Sbjct: 61 GPSNPLLADGGLSTVISKPTGASGDFLTSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVEDQKPLRGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKPLRGRNQDAVLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQLE+E+GQ+MEMGTIHAGDFLR FCSHLGM N SEEL
Sbjct: 181 KEIGRAKEYIVKQLEVELGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAAQEAVKKSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
gi|297734946|emb|CBI17180.3| unnamed protein product
[Vitis vinifera]
Length = 314
Score = 389 bits (1000), Expect = e-106
Identities = 195/244 (79%), Positives = 205/244 (84%), Gaps = 2/244 (0%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M D YCPECKR TEVV DHSAGDTVC ECGLVLEAHSIDE SEWRTFANE+ DNDPVRVG
Sbjct: 1 MTDTYCPECKRYTEVVLDHSAGDTVCSECGLVLEAHSIDEASEWRTFANESADNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXX--RWQNRASNPDRSLIQAFKTIATMADR 396
GP+NPLLADGGLST+IS P+ RWQNR SNPDRSLIQAFKTIATM DR
Sbjct: 61 GPSNPLLADGGLSTLISKPSNGGPSNDFLSSSLGRWQNRGSNPDRSLIQAFKTIATMCDR 120
Query: 397 LGLVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGA 576
LGLVATIKD ANEIYKKVEDQKPLRGRNQDA+LAAC+YIACRQEDKPRT+KEICSVANGA
Sbjct: 121 LGLVATIKDLANEIYKKVEDQKPLRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGA 180
Query: 577 TKKEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSE 756
TKKEIGRAKE+IVKQLE+EMGQ+MEMGTIHAGDFLR FCSHLGM N SE
Sbjct: 181 TKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSE 240
Query: 757 ELDI 768
ELDI
Sbjct: 241 ELDI 244
>gb|ABR16853.1| unknown [Picea sitchensis]
Length = 313
Score = 385 bits (988), Expect = e-104
Identities = 189/237 (79%), Positives = 202/237 (85%)
Frame = +1
Query: 58 CPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGPTNP 237
CP+CK+ TEVVFDHSAGDTVC+ECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGP+NP
Sbjct: 7 CPDCKKQTEVVFDHSAGDTVCVECGLVLEAHSIDETSEWRTFANETGDNDPVRVGGPSNP 66
Query: 238 LLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLGLVATI 417
LL DGGLSTVIS PN RWQNR SNPDRSLI AFKTI TM+DRLGLVATI
Sbjct: 67 LLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIMAFKTIGTMSDRLGLVATI 126
Query: 418 KDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATKKEIGR 597
KDRANEIYKKVED K +RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGA+KKE+GR
Sbjct: 127 KDRANEIYKKVEDSKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGASKKEVGR 186
Query: 598 AKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEELDI 768
AKEFIVKQLE EMG++MEMGTIHAGDFLR FCSHLGM + SEELDI
Sbjct: 187 AKEFIVKQLEEEMGKSMEMGTIHAGDFLRRFCSHLGMGHQAVKAATEAVKKSEELDI 243
>ref|XP_004957467.1| PREDICTED: transcription initiation factor IIB-like [Setaria
italica]
Length = 312
Score = 384 bits (986), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>dbj|BAK05040.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 312
Score = 384 bits (986), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D YCP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDTYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_002460572.1| hypothetical protein SORBIDRAFT_02g031020 [Sorghum bicolor]
gi|241923949|gb|EER97093.1| hypothetical protein
SORBIDRAFT_02g031020 [Sorghum bicolor]
Length = 312
Score = 384 bits (986), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSFCPDCKKQTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_006660890.1| PREDICTED: transcription initiation factor IIB-like [Oryza
brachyantha]
Length = 312
Score = 384 bits (985), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|NP_001063775.1| Os09g0534800 [Oryza sativa Japonica Group]
gi|21362998|sp|Q8W0W3.1|TF2B_ORYSJ RecName:
Full=Transcription initiation factor IIB; AltName:
Full=General transcription factor TFIIB
gi|18481632|gb|AAL73491.1|AF464908_1 general
transcription factor TFIIB [Oryza sativa]
gi|50725809|dbj|BAD33339.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|50726577|dbj|BAD34211.1| Transcription initiation
factor IIB [Oryza sativa Japonica Group]
gi|113632008|dbj|BAF25689.1| Os09g0534800 [Oryza sativa
Japonica Group] gi|125564497|gb|EAZ09877.1| hypothetical
protein OsI_32170 [Oryza sativa Indica Group]
gi|125606444|gb|EAZ45480.1| hypothetical protein
OsJ_30135 [Oryza sativa Japonica Group]
gi|347737122|gb|AEP20532.1| transcription factor [Oryza
sativa Japonica Group]
Length = 312
Score = 384 bits (985), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_002534470.1| transcription initiation factor iib, putative [Ricinus communis]
gi|223525233|gb|EEF27913.1| transcription initiation
factor iib, putative [Ricinus communis]
Length = 312
Score = 383 bits (984), Expect = e-104
Identities = 190/242 (78%), Positives = 202/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M D YC +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MGDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGLSTVI+ PN RWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>gb|EOY09190.1| Cyclin-like family protein isoform 1 [Theobroma cacao]
Length = 312
Score = 383 bits (983), Expect = e-104
Identities = 190/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
MAD +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MADAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGLSTVI+ PN RWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_006298174.1| hypothetical protein CARUB_v10014225mg [Capsella rubella]
gi|482566883|gb|EOA31072.1| hypothetical protein
CARUB_v10014225mg [Capsella rubella]
Length = 277
Score = 382 bits (982), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGL+TVIS PN RWQNR SNPDR LI AFKTIATMADRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYK+VEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_004304334.1| PREDICTED: transcription initiation factor IIB-like [Fragaria vesca
subsp. vesca]
Length = 312
Score = 382 bits (982), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D YC +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGLSTVI+ PN RWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYK+VEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>tpg|DAA40631.1| TPA: hypothetical protein ZEAMMB73_839050 [Zea mays]
Length = 330
Score = 382 bits (982), Expect = e-104
Identities = 187/242 (77%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D YCP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAQGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEI+KK+ED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIFKKIEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_003578512.1| PREDICTED: transcription initiation factor IIB-like [Brachypodium
distachyon]
Length = 312
Score = 382 bits (982), Expect = e-104
Identities = 188/242 (77%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +CP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDTFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAHGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
lyrata] gi|565481070|ref|XP_006298175.1| hypothetical
protein CARUB_v10014225mg [Capsella rubella]
gi|297328501|gb|EFH58920.1| transcription initiation
factor IIB-2 [Arabidopsis lyrata subsp. lyrata]
gi|482566884|gb|EOA31073.1| hypothetical protein
CARUB_v10014225mg [Capsella rubella]
Length = 312
Score = 382 bits (982), Expect = e-104
Identities = 189/242 (78%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGL+TVIS PN RWQNR SNPDR LI AFKTIATMADRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYK+VEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|NP_001149721.1| transcription initiation factor IIB [Zea mays]
gi|195629762|gb|ACG36522.1| transcription initiation
factor IIB [Zea mays] gi|414590059|tpg|DAA40630.1| TPA:
transcription initiation factor IIB [Zea mays]
Length = 312
Score = 382 bits (982), Expect = e-104
Identities = 187/242 (77%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D YCP+CK+ TEV FDHSAGDTVC ECGLVLEAHS+DETSEWRTFANE+ DNDPVRVG
Sbjct: 1 MSDSYCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GP+NPLL DGGLSTVI+ PN RWQNR SNPDRSLI AF+TIA MADRLG
Sbjct: 61 GPSNPLLTDGGLSTVIAKPNGAQGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEI+KK+ED K +RGRNQDA+LAACLYIACRQED+PRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIFKKIEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKEFIVKQLE+EMGQ+MEMGTIHAGDFLR FCS LGM N SEEL
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMTNQAVNAAKEAVQRSEEL 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|NP_187644.1| transcription initiation factor IIB-2 [Arabidopsis thaliana]
gi|21363045|sp|Q9SS44.1|TF2B2_ARATH RecName:
Full=Transcription initiation factor IIB-2; AltName:
Full=General transcription factor TFIIB-2;
Short=AtTFIIB2 gi|6056193|gb|AAF02810.1|AC009400_6
transcription initiation factor IIB (TFIIB) [Arabidopsis
thaliana] gi|15215784|gb|AAK91437.1| AT3g10330/F14P13_7
[Arabidopsis thaliana] gi|16974427|gb|AAL31139.1|
AT3g10330/F14P13_7 [Arabidopsis thaliana]
gi|21593436|gb|AAM65403.1| transcription initiation
factor IIB (TFIIB) [Arabidopsis thaliana]
gi|39545880|gb|AAR28003.1| TFIIB2 [Arabidopsis thaliana]
gi|332641371|gb|AEE74892.1| transcription initiation
factor IIB-2 [Arabidopsis thaliana]
Length = 312
Score = 382 bits (980), Expect = e-104
Identities = 189/242 (78%), Positives = 202/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGL+TVIS PN RWQNR SNPDR LI AFKTIATMADRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYK+VEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ +EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>dbj|BAJ53205.1| JHL06B08.6 [Jatropha curcas]
Length = 312
Score = 382 bits (980), Expect = e-104
Identities = 189/242 (78%), Positives = 202/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGLSTVI+ PN RWQNR SNPDR LI AFKTIATM+DRLG
Sbjct: 61 GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYKKVEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+IVKQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAMKAAQEAVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242
>ref|XP_006289549.1| hypothetical protein CARUB_v10003094mg [Capsella rubella]
gi|482558255|gb|EOA22447.1| hypothetical protein
CARUB_v10003094mg [Capsella rubella]
Length = 312
Score = 381 bits (978), Expect = e-103
Identities = 188/242 (77%), Positives = 203/242 (83%)
Frame = +1
Query: 43 MADLYCPECKRPTEVVFDHSAGDTVCLECGLVLEAHSIDETSEWRTFANETGDNDPVRVG 222
M+D +C +CKR TEVVFDHSAGDTVC ECGLVLE+HSIDETSEWRTFANE+GDNDPVRVG
Sbjct: 1 MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
Query: 223 GPTNPLLADGGLSTVISNPNXXXXXXXXXXXXRWQNRASNPDRSLIQAFKTIATMADRLG 402
GPTNPLLADGGL+TVIS PN RWQNR SNPDR LI AFKTIATMADRLG
Sbjct: 61 GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120
Query: 403 LVATIKDRANEIYKKVEDQKPLRGRNQDAMLAACLYIACRQEDKPRTMKEICSVANGATK 582
LVATIKDRANEIYK+VEDQK RGRNQDA+LAACLYIACRQEDKPRT+KEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
Query: 583 KEIGRAKEFIVKQLELEMGQAMEMGTIHAGDFLRHFCSHLGMINXXXXXXXXXXXXSEEL 762
KEIGRAKE+I+KQL LE GQ++EMGTIHAGDF+R FCS+LGM N SEE
Sbjct: 181 KEIGRAKEYIIKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMGNQTVKAAQESVQKSEEF 240
Query: 763 DI 768
DI
Sbjct: 241 DI 242