BLASTX nr result

ID: Rehmannia24_contig00004472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00004472
         (896 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356119.1| PREDICTED: uncharacterized protein LOC102593...    72   3e-10
ref|XP_006467553.1| PREDICTED: suppressor protein SRP40-like [Ci...    63   1e-07

>ref|XP_006356119.1| PREDICTED: uncharacterized protein LOC102593382 [Solanum tuberosum]
          Length = 264

 Score = 72.0 bits (175), Expect = 3e-10
 Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 5/243 (2%)
 Frame = -3

Query: 714 GDEVSSPASQDHHSSQNNLTXXXXXEIDEG----DNVSNHPSVEGVKIVDKPPNTVTEEN 547
           G +VS   SQDH  +    T     EI       DN  ++   +G   V+K    + E  
Sbjct: 30  GGDVSYSTSQDHQFNDKEGTREKLLEIPHSESSIDNNKSNALEKGSNEVNKV--AMVEGG 87

Query: 546 FVPVEREFKIDDESDRKNDGGFEHDETAXXXXXXXXXXXXXXXXXXXXXXSHEIKSSQAV 367
            V VERE K++DES R N      +                            + +S + 
Sbjct: 88  IVQVERELKLEDESMRNNINIECVEPAKLPHEGSLRRRSSSSSKPAMSEDIVRVATSASD 147

Query: 366 VENIPAVISEKKSLLGEKSELDMSFPANNNSVAPTIVESELKENGEKMPSSGEDKVGISD 187
           ++N+    SEK++   E   +D        +++  +V++ L++          + V  S+
Sbjct: 148 IDNVAFGSSEKENEKREMGVID-----EKPTMSDVVVDTGLEKRDY-------EAVATSN 195

Query: 186 TTECIAQETDDRSSLSYNPPIASVNNGA-DQEKDSGISEPLLAPAPQPVQTTSWKSCCGL 10
                A + DD+  + Y+ P       A D E      +PL+A  P+PVQTTSWKSCCGL
Sbjct: 196 AKPSKAVKDDDKLEIPYDEPAVDAGVRANDMEGSPHEHQPLVALDPRPVQTTSWKSCCGL 255

Query: 9   FEV 1
           FEV
Sbjct: 256 FEV 258


>ref|XP_006467553.1| PREDICTED: suppressor protein SRP40-like [Citrus sinensis]
          Length = 323

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 41/280 (14%)
 Frame = -3

Query: 717 EGDEVSSPASQDHHSSQNNLTXXXXXEIDEGDNVSNHPSVEGVKIVDKPPNTVTE----- 553
           +G E  SPASQDHH+ Q+           EG+          V+  D    ++ E     
Sbjct: 46  DGGEAGSPASQDHHNHQH--------PFQEGNGELEKRDPTPVRSSDSERKSMAEVAQGL 97

Query: 552 ENFVPVEREFKIDDESDRK--NDGGFEHDETAXXXXXXXXXXXXXXXXXXXXXXSHEIKS 379
           E+ V + RE K +D+S  +  N    E  + +                      SH  ++
Sbjct: 98  EDAVNIGREVKTEDDSGSQSINIRHVEFVKESHGGSSSSSSSDNESQVCEKRAASHNGEN 157

Query: 378 SQAVVENIPAVISEKKSLLGEKSELDMSFPANNNSVAPTIVESE---------------- 247
           + A +     +   +K+ L E     +      +SV P I ESE                
Sbjct: 158 NPADLFPKEVIQGNEKASLVEADNSAVETAPTGHSVEPLITESEEVIHVTQGDLVEISAV 217

Query: 246 ------LKENGEKMPSSG------EDKVGISDT-TECIAQETDDRSSLSYNPPIASVNNG 106
                 LKEN E   +        ED  G S T  E +  E + +   +   P   ++N 
Sbjct: 218 PDVVESLKENKESKRNEEKGNPFVEDNNGTSPTVVETVTNENEGKILPTSVTPTDEISNV 277

Query: 105 ADQEKDSGI-----SEPLLAPAPQPVQTTSWKSCCGLFEV 1
            +  +DS I     ++P +A AP+  Q TSW SCCGLF+V
Sbjct: 278 GESTRDSKIPDCSENQPFIASAPRVEQRTSWMSCCGLFDV 317


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