BLASTX nr result
ID: Rehmannia24_contig00004419
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00004419
(749 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343079.1| PREDICTED: 30S ribosomal protein S17, chloro... 151 2e-34
ref|XP_004235675.1| PREDICTED: 30S ribosomal protein S17, chloro... 151 2e-34
ref|XP_002298222.1| predicted protein [Populus trichocarpa] 147 3e-33
ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloro... 147 5e-33
emb|CBI36128.3| unnamed protein product [Vitis vinifera] 145 2e-32
gb|EOY26810.1| Ribosomal protein S17 [Theobroma cacao] 141 2e-31
ref|XP_006389718.1| hypothetical protein EUTSA_v10019289mg [Eutr... 140 5e-31
ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloro... 140 5e-31
gb|EXB74518.1| 30S ribosomal protein S17 [Morus notabilis] 138 2e-30
gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Ara... 138 2e-30
ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana... 138 2e-30
ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arab... 137 4e-30
gb|EMJ16307.1| hypothetical protein PRUPE_ppa012825mg [Prunus pe... 136 9e-30
ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus... 132 9e-29
ref|XP_006301046.1| hypothetical protein CARUB_v10021438mg [Caps... 130 6e-28
ref|XP_006426951.1| hypothetical protein CICLE_v10026679mg [Citr... 129 8e-28
pdb|3BBN|Q Chain Q, Homology Model For The Spinach Chloroplast 3... 128 2e-27
ref|XP_006465621.1| PREDICTED: 30S ribosomal protein S17, chloro... 127 4e-27
ref|XP_004302895.1| PREDICTED: 30S ribosomal protein S17, chloro... 125 1e-26
ref|XP_006595131.1| PREDICTED: 30S ribosomal protein S17, chloro... 123 6e-26
>ref|XP_006343079.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Solanum
tuberosum]
Length = 153
Score = 151 bits (382), Expect = 2e-34
Identities = 85/154 (55%), Positives = 103/154 (66%)
Frame = -1
Query: 701 MLLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGR 522
M +TSP + QFKSL+++ PFLHG+++ + A P I+AMR++QGR
Sbjct: 1 MSVTSPLLSQFKSLTISTPFLHGSSSLSRLSKPSSSITSQKPSPPAFLPPIRAMRSMQGR 60
Query: 521 VVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTK 342
VVC+TNDKTV+VEV RLAPHP YQAHDPLNQF++GD VQLEK RPISKTK
Sbjct: 61 VVCSTNDKTVSVEVTRLAPHPKYKRRVRKKKKYQAHDPLNQFQVGDYVQLEKSRPISKTK 120
Query: 341 TFWAVPVPGRAGQKAKGEAAPLQELGIPLESSQS 240
TF AVPVP R K K E QELG+PLES Q+
Sbjct: 121 TFVAVPVPPRNQPKVKEEEN--QELGLPLESLQT 152
>ref|XP_004235675.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Solanum
lycopersicum]
Length = 153
Score = 151 bits (382), Expect = 2e-34
Identities = 84/154 (54%), Positives = 103/154 (66%)
Frame = -1
Query: 701 MLLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGR 522
M +TSP + QFKSL+++ PFLHG+++ + A P I+AMR++QGR
Sbjct: 1 MSVTSPLLSQFKSLTISTPFLHGSSSLSRLSTPSSSITSQKPSPPAFLPPIRAMRSMQGR 60
Query: 521 VVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTK 342
VVC+TNDKTV+VEV RLAPHP YQAHDPLNQF++GD VQLEK RPISKTK
Sbjct: 61 VVCSTNDKTVSVEVTRLAPHPKYKRRVRKKKKYQAHDPLNQFQVGDYVQLEKSRPISKTK 120
Query: 341 TFWAVPVPGRAGQKAKGEAAPLQELGIPLESSQS 240
TF A+PVP R K K E QELG+PLES Q+
Sbjct: 121 TFVAIPVPPRNQTKVKEEEN--QELGLPLESLQT 152
>ref|XP_002298222.1| predicted protein [Populus trichocarpa]
Length = 160
Score = 147 bits (372), Expect = 3e-33
Identities = 88/157 (56%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
Frame = -1
Query: 701 MLLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVF-PVIKAMRTLQG 525
MLLT SL+L+ PFLHG TT +H+ K F P I+AM++LQG
Sbjct: 1 MLLTMSLTSSLNSLTLSTPFLHG-TTQLSHLSKPTSSLTLRPAKPFTFLPPIRAMKSLQG 59
Query: 524 RVVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKT 345
+VVCAT+DKTVAVEV RLAPHP YQAHDP NQFK+GDLVQLEK RPISKT
Sbjct: 60 KVVCATSDKTVAVEVTRLAPHPKYKRRVRKKKKYQAHDPENQFKVGDLVQLEKSRPISKT 119
Query: 344 KTFWAVPVPGR-AGQKAKGEAAPL--QELGIPLESSQ 243
K+F AVPVP R +K +GE + QELGIPLES Q
Sbjct: 120 KSFLAVPVPARKKKEKKEGEEGGVGSQELGIPLESQQ 156
>ref|XP_004141765.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Cucumis
sativus] gi|449519627|ref|XP_004166836.1| PREDICTED: 30S
ribosomal protein S17, chloroplastic-like [Cucumis
sativus]
Length = 164
Score = 147 bits (370), Expect = 5e-33
Identities = 84/153 (54%), Positives = 98/153 (64%), Gaps = 1/153 (0%)
Frame = -1
Query: 698 LLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVF-PVIKAMRTLQGR 522
LL PP+ K LS+++ FLHG+T P + + K F P I+AMR+LQGR
Sbjct: 10 LLQIPPVQSLKKLSISSSFLHGST-PLSFLSKPSSSSSPFPSQTPNFLPSIRAMRSLQGR 68
Query: 521 VVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTK 342
VVCATNDKTVAVEVVRLAPHP YQAHDP NQF++GD V+LEK RPISK K
Sbjct: 69 VVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFQVGDFVELEKCRPISKMK 128
Query: 341 TFWAVPVPGRAGQKAKGEAAPLQELGIPLESSQ 243
TF A+PVP R +K E ELGIPLES Q
Sbjct: 129 TFLAIPVPARNSKKKAVEGGEGGELGIPLESQQ 161
>emb|CBI36128.3| unnamed protein product [Vitis vinifera]
Length = 189
Score = 145 bits (365), Expect = 2e-32
Identities = 81/154 (52%), Positives = 99/154 (64%)
Frame = -1
Query: 701 MLLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGR 522
+LL +P + +SL LT PFLHG++ + P I+AM+++QGR
Sbjct: 38 ILLPNPAMSLLQSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKSMQGR 97
Query: 521 VVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTK 342
VVCAT+DKTVAVEVVRLAPHP YQAHDP NQFK+GD+VQLEK RPISKTK
Sbjct: 98 VVCATSDKTVAVEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISKTK 157
Query: 341 TFWAVPVPGRAGQKAKGEAAPLQELGIPLESSQS 240
TF A+PVP R +AK + A EL IPLES Q+
Sbjct: 158 TFVAIPVPNR--NRAKSQEAAAGELEIPLESQQA 189
>gb|EOY26810.1| Ribosomal protein S17 [Theobroma cacao]
Length = 152
Score = 141 bits (356), Expect = 2e-31
Identities = 77/142 (54%), Positives = 94/142 (66%)
Frame = -1
Query: 668 KSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKTVA 489
+SL L++PFLHG+T+ + P I+A+++LQG+VVCATNDKTV+
Sbjct: 8 QSLKLSSPFLHGSTSLSLLSKPNSSLSHQPLKTPTFLPPIRALKSLQGKVVCATNDKTVS 67
Query: 488 VEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRA 309
VEVVRLAPHP +QAHDP NQFK+GD VQLEK RPISKTKTF AVPVP +
Sbjct: 68 VEVVRLAPHPKYKRRVRKKKKFQAHDPDNQFKVGDYVQLEKSRPISKTKTFIAVPVPSKN 127
Query: 308 GQKAKGEAAPLQELGIPLESSQ 243
G++ K E ELGIPLES Q
Sbjct: 128 GRQEKKETG---ELGIPLESQQ 146
>ref|XP_006389718.1| hypothetical protein EUTSA_v10019289mg [Eutrema salsugineum]
gi|557086152|gb|ESQ27004.1| hypothetical protein
EUTSA_v10019289mg [Eutrema salsugineum]
Length = 150
Score = 140 bits (353), Expect = 5e-31
Identities = 78/142 (54%), Positives = 98/142 (69%)
Frame = -1
Query: 668 KSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKTVA 489
++L L++PF HG+T P + + K + PVI+AM+T+QGRVVCATNDKTVA
Sbjct: 9 QALKLSSPFAHGST-PLSSLSKPNFFANPPRPA--LVPVIRAMKTMQGRVVCATNDKTVA 65
Query: 488 VEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRA 309
VEVVRLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+F A+PV R+
Sbjct: 66 VEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVVTRS 125
Query: 308 GQKAKGEAAPLQELGIPLESSQ 243
G+KA+ +LGIPLES Q
Sbjct: 126 GRKAEVGGESGNDLGIPLESQQ 147
>ref|XP_002284468.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Vitis
vinifera]
Length = 145
Score = 140 bits (353), Expect = 5e-31
Identities = 78/143 (54%), Positives = 93/143 (65%)
Frame = -1
Query: 668 KSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKTVA 489
+SL LT PFLHG++ + P I+AM+++QGRVVCAT+DKTVA
Sbjct: 5 QSLKLTTPFLHGSSNLSLLSKPSSTSLASPPPPPTFLPPIRAMKSMQGRVVCATSDKTVA 64
Query: 488 VEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRA 309
VEVVRLAPHP YQAHDP NQFK+GD+VQLEK RPISKTKTF A+PVP R
Sbjct: 65 VEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVQLEKSRPISKTKTFVAIPVPNR- 123
Query: 308 GQKAKGEAAPLQELGIPLESSQS 240
+AK + A EL IPLES Q+
Sbjct: 124 -NRAKSQEAAAGELEIPLESQQA 145
>gb|EXB74518.1| 30S ribosomal protein S17 [Morus notabilis]
Length = 167
Score = 138 bits (347), Expect = 2e-30
Identities = 89/166 (53%), Positives = 101/166 (60%), Gaps = 10/166 (6%)
Frame = -1
Query: 710 LKKMLLTSPPILQFKSLSLTAP-------FLHGATTPATHIFKXXXXXXXXXXXXAVF-P 555
L LL PP+ K S T P FLHG+ P + + K F P
Sbjct: 3 LTASLLHLPPLHSLKLSSSTTPTTTTTTHFLHGSI-PLSLLSKPSSSLTNPTSCPPNFLP 61
Query: 554 VIKAMRTLQGRVVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQ 375
I+AMR+LQGRVVCAT+DKTVAVEV+RLAPHP +QAHDP NQFK+GD VQ
Sbjct: 62 PIRAMRSLQGRVVCATSDKTVAVEVLRLAPHPKYKRRVRKKKKFQAHDPDNQFKVGDYVQ 121
Query: 374 LEKGRPISKTKTFWAVPVPGRAGQK--AKGEAAPLQELGIPLESSQ 243
LEK RPISKTKTF AVPVP R +K A GE+A ELGIPLES Q
Sbjct: 122 LEKSRPISKTKTFVAVPVPARNSRKKDADGESA---ELGIPLESQQ 164
>gb|AAA84030.1| ribosomal protein S17, partial (chloroplast) [Arabidopsis thaliana]
Length = 159
Score = 138 bits (347), Expect = 2e-30
Identities = 80/152 (52%), Positives = 102/152 (67%)
Frame = -1
Query: 698 LLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRV 519
++TS ++L L++PF HG+T P + + K + PVI+AM+T+QGRV
Sbjct: 11 MITSSLTSSLQALKLSSPFAHGST-PLSSLSKPNSFPNHRMPA--LVPVIRAMKTMQGRV 67
Query: 518 VCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKT 339
VCAT+DKTVAVEVVRLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+
Sbjct: 68 VCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKS 127
Query: 338 FWAVPVPGRAGQKAKGEAAPLQELGIPLESSQ 243
F A+PV RA +KA EA + LG+PLES Q
Sbjct: 128 FVALPVIARAARKA--EAGGDELLGLPLESQQ 157
>ref|NP_178103.1| 30S ribosomal protein S17 [Arabidopsis thaliana]
gi|133815|sp|P16180.1|RR17_ARATH RecName: Full=30S
ribosomal protein S17, chloroplastic; AltName:
Full=CS17; Flags: Precursor
gi|12324576|gb|AAG52237.1|AC011717_5 30S ribosomal
protein S17, chloroplast precursor (CS17); 62258-62707
[Arabidopsis thaliana]
gi|14423474|gb|AAK62419.1|AF386974_1 30S ribosomal
protein S17, chloroplast precursor (CS17) [Arabidopsis
thaliana] gi|16503|emb|CAA77502.1| Plastid ribosomal
protein CS17 [Arabidopsis thaliana]
gi|18377576|gb|AAL66954.1| 30S ribosomal protein S17,
chloroplast precursor (CS17) [Arabidopsis thaliana]
gi|332198192|gb|AEE36313.1| 30S ribosomal protein S17
[Arabidopsis thaliana]
Length = 149
Score = 138 bits (347), Expect = 2e-30
Identities = 80/152 (52%), Positives = 102/152 (67%)
Frame = -1
Query: 698 LLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRV 519
++TS ++L L++PF HG+T P + + K + PVI+AM+T+QGRV
Sbjct: 1 MITSSLTSSLQALKLSSPFAHGST-PLSSLSKPNSFPNHRMPA--LVPVIRAMKTMQGRV 57
Query: 518 VCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKT 339
VCAT+DKTVAVEVVRLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+
Sbjct: 58 VCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKS 117
Query: 338 FWAVPVPGRAGQKAKGEAAPLQELGIPLESSQ 243
F A+PV RA +KA EA + LG+PLES Q
Sbjct: 118 FVALPVIARAARKA--EAGGDELLGLPLESQQ 147
>ref|XP_002887857.1| hypothetical protein ARALYDRAFT_477281 [Arabidopsis lyrata subsp.
lyrata] gi|297333698|gb|EFH64116.1| hypothetical protein
ARALYDRAFT_477281 [Arabidopsis lyrata subsp. lyrata]
Length = 148
Score = 137 bits (345), Expect = 4e-30
Identities = 80/151 (52%), Positives = 100/151 (66%)
Frame = -1
Query: 695 LTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVV 516
+TS ++L L++PF HG+T P + + K + PVI+AM+T+QGRVV
Sbjct: 1 MTSSLTSSLQALKLSSPFAHGST-PLSSLSKPNSFPNHRMPA--LAPVIRAMKTMQGRVV 57
Query: 515 CATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTF 336
CAT+DKTVAVEV RLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+F
Sbjct: 58 CATSDKTVAVEVTRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSF 117
Query: 335 WAVPVPGRAGQKAKGEAAPLQELGIPLESSQ 243
A+PV RA +KA+ A L LGIPLES Q
Sbjct: 118 VALPVVPRAARKAEAGAGDL--LGIPLESQQ 146
>gb|EMJ16307.1| hypothetical protein PRUPE_ppa012825mg [Prunus persica]
Length = 153
Score = 136 bits (342), Expect = 9e-30
Identities = 74/142 (52%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Frame = -1
Query: 665 SLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVF-PVIKAMRTLQGRVVCATNDKTVA 489
S L+ FLHG++TP + + K F P ++A++ LQGRVVC+T+DKTVA
Sbjct: 11 SPKLSTQFLHGSSTPLSPLSKPTSSLSFPTLQRHSFLPPVRALKYLQGRVVCSTSDKTVA 70
Query: 488 VEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRA 309
VEV RLAPHP YQAHDP NQF++GD+VQLEK RPISKTKTF AVP+P +
Sbjct: 71 VEVTRLAPHPKYKRRVRKKKKYQAHDPENQFQVGDVVQLEKSRPISKTKTFIAVPLPAKN 130
Query: 308 GQKAKGEAAPLQELGIPLESSQ 243
+ GE +ELGIPLES Q
Sbjct: 131 VKSKSGEEDASKELGIPLESQQ 152
>ref|XP_002516024.1| 30S ribosomal protein S17, putative [Ricinus communis]
gi|223544929|gb|EEF46444.1| 30S ribosomal protein S17,
putative [Ricinus communis]
Length = 152
Score = 132 bits (333), Expect = 9e-29
Identities = 79/154 (51%), Positives = 97/154 (62%), Gaps = 1/154 (0%)
Frame = -1
Query: 701 MLLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVF-PVIKAMRTLQG 525
M LTS SL+L+ PFL+G T P +++ K F P ++AM+++QG
Sbjct: 1 MSLTS----SLNSLTLSTPFLNG-TAPLSNLSKPTSSLSLQHPNPFSFMPPVRAMKSIQG 55
Query: 524 RVVCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKT 345
RVVCATNDKTV+VEV RLAPHP +QAHDP NQFK+GDLVQLEK +PISKT
Sbjct: 56 RVVCATNDKTVSVEVTRLAPHPKYKRRVRKKKKFQAHDPENQFKVGDLVQLEKSKPISKT 115
Query: 344 KTFWAVPVPGRAGQKAKGEAAPLQELGIPLESSQ 243
K F A+PVP R +K K + LGIPLES Q
Sbjct: 116 KAFIAIPVPARI-RKEKKQENDDGGLGIPLESQQ 148
>ref|XP_006301046.1| hypothetical protein CARUB_v10021438mg [Capsella rubella]
gi|482569756|gb|EOA33944.1| hypothetical protein
CARUB_v10021438mg [Capsella rubella]
Length = 144
Score = 130 bits (326), Expect = 6e-28
Identities = 77/142 (54%), Positives = 94/142 (66%)
Frame = -1
Query: 668 KSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKTVA 489
++L L++PF HG+T P + + K + PVI+AM+T+QGRVVCATNDKTVA
Sbjct: 9 QALKLSSPFAHGST-PLSSLSKPNSFPSPRMPA--LVPVIRAMKTMQGRVVCATNDKTVA 65
Query: 488 VEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRA 309
VEVVRLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+F A+PV R
Sbjct: 66 VEVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKSFVALPVVPRK 125
Query: 308 GQKAKGEAAPLQELGIPLESSQ 243
Q G+ LGIPLES Q
Sbjct: 126 SQ-GGGDGI----LGIPLESQQ 142
>ref|XP_006426951.1| hypothetical protein CICLE_v10026679mg [Citrus clementina]
gi|557528941|gb|ESR40191.1| hypothetical protein
CICLE_v10026679mg [Citrus clementina]
Length = 157
Score = 129 bits (325), Expect = 8e-28
Identities = 82/147 (55%), Positives = 97/147 (65%), Gaps = 6/147 (4%)
Frame = -1
Query: 665 SLSLTAP---FLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKT 495
SL L++P FL+G+T P T + K FP IKAM+ +QGRVVCA++DKT
Sbjct: 10 SLKLSSPKSRFLNGST-PLTRLSKPTSTPQNLPYAS--FPQIKAMKKMQGRVVCASSDKT 66
Query: 494 VAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPG 315
VAVEVVRL PHP YQAHDP NQF++GDLVQLEK RPISKTK+F AV +P
Sbjct: 67 VAVEVVRLDPHPKYKRRIRKKKKYQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPP 126
Query: 314 R-AGQKAKGEA--APLQELGIPLESSQ 243
R A +KA GE+ A ELGIPLES Q
Sbjct: 127 RNASKKAAGESSNAGNNELGIPLESEQ 153
>pdb|3BBN|Q Chain Q, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 142
Score = 128 bits (322), Expect = 2e-27
Identities = 71/135 (52%), Positives = 92/135 (68%)
Frame = -1
Query: 698 LLTSPPILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRV 519
++TS ++L L++PF HG+T P + + K + PVI+AM+T+QGRV
Sbjct: 11 MITSSLTSSLQALKLSSPFAHGST-PLSSLSKPNSFPNHRMPA--LVPVIRAMKTMQGRV 67
Query: 518 VCATNDKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKT 339
VCAT+DKTVAVEVVRLAPHP YQAHDP NQFK+GD+V+LEK RPISKTK+
Sbjct: 68 VCATSDKTVAVEVVRLAPHPKYKRRVRMKKKYQAHDPDNQFKVGDVVRLEKSRPISKTKS 127
Query: 338 FWAVPVPGRAGQKAK 294
F A+PV RA +KA+
Sbjct: 128 FVALPVIARAARKAE 142
>ref|XP_006465621.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Citrus
sinensis]
Length = 157
Score = 127 bits (319), Expect = 4e-27
Identities = 81/147 (55%), Positives = 96/147 (65%), Gaps = 6/147 (4%)
Frame = -1
Query: 665 SLSLTAP---FLHGATTPATHIFKXXXXXXXXXXXXAVFPVIKAMRTLQGRVVCATNDKT 495
SL L++P FL+G+T P T + K FP IKAM+ +QGRVVCA++DKT
Sbjct: 10 SLKLSSPKTRFLNGST-PLTRLSKPPSTPQNLPYSS--FPQIKAMKKMQGRVVCASSDKT 66
Query: 494 VAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPG 315
VAVEVVRL PHP YQAHDP NQF++GDLVQLEK RPISKTK+F AV +P
Sbjct: 67 VAVEVVRLDPHPKYKRRIRKKKKYQAHDPENQFQVGDLVQLEKSRPISKTKSFIAVAMPP 126
Query: 314 R-AGQKAKGEA--APLQELGIPLESSQ 243
R A +KA GE+ A ELGIP ES Q
Sbjct: 127 RNASKKAAGESSNAGNNELGIPSESEQ 153
>ref|XP_004302895.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 151
Score = 125 bits (315), Expect = 1e-26
Identities = 75/147 (51%), Positives = 90/147 (61%), Gaps = 1/147 (0%)
Frame = -1
Query: 680 ILQFKSLSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAV-FPVIKAMRTLQGRVVCATN 504
+L F L+ FLHG+T P + + K IKA++ LQGRVVC+TN
Sbjct: 7 LLPFSPTKLSTQFLHGST-PLSFLSKPTSSLSFPTPLRHTSLQPIKALKYLQGRVVCSTN 65
Query: 503 DKTVAVEVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVP 324
DKTVAVEV RLAPHP YQAHD NQF++GD+VQLEK RPISKTKTF AVP
Sbjct: 66 DKTVAVEVTRLAPHPKYKRRVRKKKKYQAHDENNQFQVGDVVQLEKSRPISKTKTFIAVP 125
Query: 323 VPGRAGQKAKGEAAPLQELGIPLESSQ 243
+P + +K + E ELGIPLES Q
Sbjct: 126 LPPKNVKKKEEEGT--SELGIPLESQQ 150
>ref|XP_006595131.1| PREDICTED: 30S ribosomal protein S17, chloroplastic-like [Glycine
max]
Length = 166
Score = 123 bits (309), Expect = 6e-26
Identities = 73/139 (52%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
Frame = -1
Query: 662 LSLTAPFLHGATTPATHIFKXXXXXXXXXXXXAVF-PVIKAMRTLQGRVVCATNDKTVAV 486
+ L+ PFL+G T + K F P I AM+T+QGRVVC+T+DKTVAV
Sbjct: 29 VQLSTPFLNGHGHSTTLLSKHSSAVTQTHWAPPSFLPQINAMKTMQGRVVCSTSDKTVAV 88
Query: 485 EVVRLAPHPXXXXXXXXXXXYQAHDPLNQFKIGDLVQLEKGRPISKTKTFWAVPVPGRAG 306
EVVRLAPHP YQAHDP NQFK+GD+VQL+K RPISKTK F A+PVP R
Sbjct: 89 EVVRLAPHPKYKRRVRKKKKYQAHDPDNQFKVGDIVQLQKTRPISKTKAFLALPVPKR-- 146
Query: 305 QKAKGEAAPLQELGIPLES 249
++ EA P +EL IP ES
Sbjct: 147 PSSRPEAQP-EELSIPFES 164