BLASTX nr result

ID: Rehmannia24_contig00004321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00004321
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY28511.1| Uncharacterized protein TCM_030054 [Theobroma cacao]    70   3e-10
ref|XP_002316699.1| hypothetical protein POPTR_0011s03530g [Popu...    69   8e-10
ref|XP_002518589.1| conserved hypothetical protein [Ricinus comm...    57   3e-06

>gb|EOY28511.1| Uncharacterized protein TCM_030054 [Theobroma cacao]
          Length = 345

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
 Frame = -3

Query: 343 KPLPPSDIICYPRSVPKSDNTSSENFSYASIPSPYGKND-DHPPIKPQNGSKPVDTKAGN 167
           KPLPPS+ ICYP S   S++ S  NFSY SI SPYGK+  D P  KP NGSK    K   
Sbjct: 132 KPLPPSEGICYPLSSVDSNDLSLNNFSYGSIKSPYGKDGVDEPVAKPSNGSKTATAKDQE 191

Query: 166 VEN-GDKVTSDVEIVE-ALDVIPNNDSPSCEREIGFESGVRGDYGYESERPVSQIP 5
            ++ G     +V+  E  +D     DS     + G+ SG    +G E E+ V QIP
Sbjct: 192 QQSQGSSGDHNVDSKEKPVDSYQGEDSKENYPD-GYSSG--SGHGNEYEKRVPQIP 244


>ref|XP_002316699.1| hypothetical protein POPTR_0011s03530g [Populus trichocarpa]
           gi|222859764|gb|EEE97311.1| hypothetical protein
           POPTR_0011s03530g [Populus trichocarpa]
          Length = 354

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 46/128 (35%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
 Frame = -3

Query: 343 KPLPPSDIICYPRSVPKSDNTSSENFSYASIPSPYGKND-DHPPIKPQNGSKPVDTKA-- 173
           KPLP S   CYPRS P  + +S   FSY SI +PYGK++ + P  KPQN SKP+   A  
Sbjct: 133 KPLPHSAETCYPRSTPDPNVSSLNGFSYGSIIAPYGKDEVNEPAAKPQNESKPISPPAIE 192

Query: 172 ------------GNVENGDKVTSDVEIVEALDVIPNNDSPSCEREIGFESGVRGDYGYES 29
                       G   + +K+    E  E      ++  PS   + G  +G  G++GYE 
Sbjct: 193 AAPVPVPLELSNGRGNSQEKLQKGEESEEK---GVDHPDPSPGYDTGIANGSCGEFGYEY 249

Query: 28  ERPVSQIP 5
             P  QIP
Sbjct: 250 GMPGPQIP 257


>ref|XP_002518589.1| conserved hypothetical protein [Ricinus communis]
           gi|223542434|gb|EEF43976.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 336

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 7/120 (5%)
 Frame = -3

Query: 343 KPLPPSDIICYPRSVPKSDNTSSENFSYASIPSPYGKN--DDHPPIKPQNGSKPVDTKAG 170
           KPLPPSD  CYPRS      TS    S   I +P      D+H   KPQ GSKP    A 
Sbjct: 133 KPLPPSDETCYPRS------TSLNGVSPGVITTPVVTEVVDEHAA-KPQAGSKPTAAIA- 184

Query: 169 NVENGDKVTSDVEIVEALDVIPNNDSPSCERE-----IGFESGVRGDYGYESERPVSQIP 5
                +    ++++ + LD+    +S     +      G+++G+RG+ GYE E+ V+QIP
Sbjct: 185 -----EAEQQELQLDKPLDLYQGEESKEKYGDDHNSWSGYDNGLRGESGYEYEKQVAQIP 239


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