BLASTX nr result

ID: Rehmannia24_contig00004246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia24_contig00004246
         (1585 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   486   e-135
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   486   e-135
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              486   e-134
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   485   e-134
ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citr...   482   e-133
gb|EOX91146.1| Splicing factor U2af large subunit A isoform 1 [T...   482   e-133
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   481   e-133
ref|XP_004138355.1| PREDICTED: splicing factor U2af large subuni...   481   e-133
ref|XP_006466767.1| PREDICTED: splicing factor U2af large subuni...   481   e-133
ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Popu...   479   e-132
ref|XP_006363145.1| PREDICTED: splicing factor U2af large subuni...   479   e-132
ref|XP_004232384.1| PREDICTED: splicing factor U2af large subuni...   479   e-132
gb|ABU45209.1| unknown [Solanum bulbocastanum]                        478   e-132
ref|XP_006346939.1| PREDICTED: splicing factor U2af large subuni...   478   e-132
ref|XP_004233511.1| PREDICTED: splicing factor U2af large subuni...   478   e-132
gb|ABU45190.1| unknown [Capsicum frutescens]                          478   e-132
ref|XP_006466764.1| PREDICTED: splicing factor U2af large subuni...   477   e-132
ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citr...   477   e-132
gb|EOX91147.1| Splicing factor U2af large subunit A isoform 2 [T...   477   e-132
sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large...   477   e-132

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  486 bits (1252), Expect = e-135
 Identities = 244/279 (87%), Positives = 253/279 (90%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGTTP+IPGMFPNM PLASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 189  TGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 248

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 249  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 308

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 309  PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 368

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVR
Sbjct: 369  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 428

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQG +QPKPEQE+VLLHAQQQIALQRLM QP  +ATK
Sbjct: 429  RANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATK 467


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  486 bits (1252), Expect = e-135
 Identities = 244/279 (87%), Positives = 253/279 (90%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGTTP+IPGMFPNM PLASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQ
Sbjct: 186  AGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 245

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 246  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 305

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 306  PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 365

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVR
Sbjct: 366  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 425

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQG +QPKPEQE+VLLHAQQQIALQRLM QP  +ATK
Sbjct: 426  RANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATK 464


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  486 bits (1251), Expect = e-134
 Identities = 244/278 (87%), Positives = 252/278 (90%)
 Frame = -3

Query: 836 GQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 657
           GQ+PGTTP+IPGMFPNM PLASGQFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 15  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 74

Query: 656 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 477
           VATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 75  VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 134

Query: 476 VKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTESQ 297
           VKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+Q
Sbjct: 135 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 194

Query: 296 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVRR 117
           IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVRR
Sbjct: 195 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 254

Query: 116 ANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
           ANQG +QPKPEQE+VLLHAQQQIALQRLM QP  +ATK
Sbjct: 255 ANQGASQPKPEQENVLLHAQQQIALQRLMFQPGALATK 292


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  485 bits (1248), Expect = e-134
 Identities = 243/279 (87%), Positives = 253/279 (90%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGT P IPGMFPNM PLASGQFGALP+MP+QAMTQQATRHARRVYVGGLP  ANEQ
Sbjct: 194  AGQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQ 253

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 254  SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA 313

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            P KVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 314  PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA 373

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTVR
Sbjct: 374  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 433

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGTTQPKPEQESVLLHAQQQIALQRLMLQP+ +ATK
Sbjct: 434  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATLATK 472


>ref|XP_006425715.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
            gi|557527705|gb|ESR38955.1| hypothetical protein
            CICLE_v10025221mg [Citrus clementina]
          Length = 592

 Score =  482 bits (1240), Expect = e-133
 Identities = 242/283 (85%), Positives = 251/283 (88%)
 Frame = -3

Query: 851  GRINSGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPT 672
            G   +GQ+PG  P+IPGMFPNM PL +GQFGALP+MPVQAMTQQATRHARRVYVGGLPPT
Sbjct: 209  GAAAAGQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPT 268

Query: 671  ANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 492
            ANEQSVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII
Sbjct: 269  ANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGII 328

Query: 491  FEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYY 312
            FEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYY
Sbjct: 329  FEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYY 388

Query: 311  FTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKT 132
            FTE+QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKT
Sbjct: 389  FTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKT 448

Query: 131  LTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            LTVRRANQG  QPKPEQESVLLHAQQQIALQRLMLQP  V +K
Sbjct: 449  LTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 491


>gb|EOX91146.1| Splicing factor U2af large subunit A isoform 1 [Theobroma cacao]
          Length = 584

 Score =  482 bits (1240), Expect = e-133
 Identities = 239/279 (85%), Positives = 253/279 (90%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGT P++PG+FPNM PLA+GQFGALP+MP+QAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 205  TGQIPGTNPALPGVFPNMFPLATGQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANEQ 264

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVAT+FS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 265  SVATYFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 324

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 325  PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA 384

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVR
Sbjct: 385  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 444

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGTTQPKPEQES+L HAQQQIALQRLMLQP  + TK
Sbjct: 445  RANQGTTQPKPEQESILQHAQQQIALQRLMLQPQGLPTK 483


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  481 bits (1238), Expect = e-133
 Identities = 242/280 (86%), Positives = 253/280 (90%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGTTP+IPGMFP M PLA+GQ FGALP+MPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 208  AGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 267

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
Sbjct: 268  QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 327

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
            APVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE
Sbjct: 328  APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 387

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            +Q+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTV
Sbjct: 388  AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 447

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQG  QPKPEQESVLLHAQQQIALQ+LMLQP  V+TK
Sbjct: 448  RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTK 487


>ref|XP_004138355.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
            sativus]
          Length = 587

 Score =  481 bits (1238), Expect = e-133
 Identities = 242/280 (86%), Positives = 253/280 (90%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGTTP+IPGMFP M PLA+GQ FGALP+MPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 208  AGQIPGTTPAIPGMFPTMFPLATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 267

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
Sbjct: 268  QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 327

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
            APVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE
Sbjct: 328  APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 387

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            +Q+RELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTV
Sbjct: 388  AQVRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 447

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQG  QPKPEQESVLLHAQQQIALQ+LMLQP  V+TK
Sbjct: 448  RRANQGANQPKPEQESVLLHAQQQIALQKLMLQPGAVSTK 487


>ref|XP_006466767.1| PREDICTED: splicing factor U2af large subunit B-like isoform X5
           [Citrus sinensis]
          Length = 380

 Score =  481 bits (1237), Expect = e-133
 Identities = 241/278 (86%), Positives = 249/278 (89%)
 Frame = -3

Query: 836 GQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQS 657
           GQ+PG  P+IPGMFPNM PL +GQFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQS
Sbjct: 2   GQIPGANPAIPGMFPNMFPLVTGQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQS 61

Query: 656 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 477
           VATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 62  VATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 121

Query: 476 VKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTESQ 297
           VKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+Q
Sbjct: 122 VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 181

Query: 296 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVRR 117
           IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVRR
Sbjct: 182 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 241

Query: 116 ANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
           ANQG  QPKPEQESVLLHAQQQIALQRLMLQP  V +K
Sbjct: 242 ANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 279


>ref|XP_006383230.1| hypothetical protein POPTR_0005s12700g [Populus trichocarpa]
            gi|550338812|gb|ERP61027.1| hypothetical protein
            POPTR_0005s12700g [Populus trichocarpa]
          Length = 588

 Score =  479 bits (1233), Expect = e-132
 Identities = 241/273 (88%), Positives = 247/273 (90%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            SGQ+ GTTP IPGMFPNM PL + QFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 205  SGQIAGTTPPIPGMFPNMFPLGTSQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQ 264

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 265  SVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 324

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTES
Sbjct: 325  PVKVRRPSDYNPSLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTES 384

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTVR
Sbjct: 385  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 444

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQP 21
            RANQGT QPKPEQE+VLLHAQQQIALQRLMLQP
Sbjct: 445  RANQGTNQPKPEQENVLLHAQQQIALQRLMLQP 477


>ref|XP_006363145.1| PREDICTED: splicing factor U2af large subunit A-like isoform X1
            [Solanum tuberosum]
          Length = 556

 Score =  479 bits (1232), Expect = e-132
 Identities = 243/280 (86%), Positives = 251/280 (89%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTT-PSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGTT PSIPGMF NM PLA+GQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 176  AGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 235

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG
Sbjct: 236  QSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEG 295

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
             PVKVRRPSDYNPSLAATLGPSQP+PNLN               GPDRIFVGGLPYYFTE
Sbjct: 296  GPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTE 355

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            SQIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTV
Sbjct: 356  SQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTV 415

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQGTTQP PEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 416  RRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATK 455


>ref|XP_004232384.1| PREDICTED: splicing factor U2af large subunit A-like [Solanum
            lycopersicum]
          Length = 558

 Score =  479 bits (1232), Expect = e-132
 Identities = 243/280 (86%), Positives = 251/280 (89%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTT-PSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGTT PSIPGMF NM PLA+GQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 178  AGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 237

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG
Sbjct: 238  QSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEG 297

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
             PVKVRRPSDYNPSLAATLGPSQP+PNLN               GPDRIFVGGLPYYFTE
Sbjct: 298  GPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTE 357

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            SQIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTV
Sbjct: 358  SQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTV 417

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQGTTQP PEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 418  RRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATK 457


>gb|ABU45209.1| unknown [Solanum bulbocastanum]
          Length = 558

 Score =  478 bits (1231), Expect = e-132
 Identities = 242/280 (86%), Positives = 251/280 (89%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTT-PSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGTT PSIPGMF NM PLA+GQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE
Sbjct: 178  AGQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 237

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG++FEG
Sbjct: 238  QSVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVVFEG 297

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
             PVKVRRPSDYNPSLAATLGPSQP+PNLN               GPDRIFVGGLPYYFTE
Sbjct: 298  GPVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTE 357

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            SQIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTV
Sbjct: 358  SQIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTV 417

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQGTTQP PEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 418  RRANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATK 457


>ref|XP_006346939.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
            [Solanum tuberosum]
          Length = 560

 Score =  478 bits (1229), Expect = e-132
 Identities = 239/279 (85%), Positives = 250/279 (89%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGT+P IPGM PNM PL SGQFGALP+MP+QAMTQQATRHARRVYVGGLP T+NEQ
Sbjct: 181  AGQVPGTSPVIPGMLPNMFPLTSGQFGALPVMPIQAMTQQATRHARRVYVGGLPATSNEQ 240

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 241  SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA 300

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            P KVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 301  PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA 360

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTVR
Sbjct: 361  QIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 420

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGTTQPKPEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 421  RANQGTTQPKPEQESVLLHAQQQIALQRFMLQPGALATK 459


>ref|XP_004233511.1| PREDICTED: splicing factor U2af large subunit B-like [Solanum
            lycopersicum]
          Length = 560

 Score =  478 bits (1229), Expect = e-132
 Identities = 239/279 (85%), Positives = 250/279 (89%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGT+P IPGM PNM PL SG FGALP+MP+QAMTQQATRHARRVYVGGLP T+NEQ
Sbjct: 181  AGQVPGTSPGIPGMLPNMFPLTSGPFGALPVMPIQAMTQQATRHARRVYVGGLPATSNEQ 240

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 241  SVATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGA 300

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            P KVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE+
Sbjct: 301  PCKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEA 360

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTVR
Sbjct: 361  QIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 420

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGTTQPKPEQESVLLHAQQQIALQRLMLQP  +ATK
Sbjct: 421  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPGALATK 459


>gb|ABU45190.1| unknown [Capsicum frutescens]
          Length = 551

 Score =  478 bits (1229), Expect = e-132
 Identities = 240/279 (86%), Positives = 248/279 (88%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PG  PSIPGMF NM PLA+GQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 172  TGQVPGANPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 231

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG 
Sbjct: 232  SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGG 291

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQP+PNLN               GPDRIFVGGLPYYFTES
Sbjct: 292  PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTES 351

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTVR
Sbjct: 352  QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 411

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGT QP PEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 412  RANQGTNQPNPEQESVLLHAQQQIALQRFMLQPGALATK 450


>ref|XP_006466764.1| PREDICTED: splicing factor U2af large subunit B-like isoform X2
            [Citrus sinensis]
          Length = 581

 Score =  477 bits (1228), Expect = e-132
 Identities = 242/284 (85%), Positives = 251/284 (88%), Gaps = 1/284 (0%)
 Frame = -3

Query: 851  GRINSGQMPGTTPSIPGMFPNMLPLASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPP 675
            G   +GQ+PG  P+IPGMFPNM PL +GQ FGALP+MPVQAMTQQATRHARRVYVGGLPP
Sbjct: 197  GAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPP 256

Query: 674  TANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 495
            TANEQSVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI
Sbjct: 257  TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 316

Query: 494  IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPY 315
            IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPY
Sbjct: 317  IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 376

Query: 314  YFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDK 135
            YFTE+QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDK
Sbjct: 377  YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 436

Query: 134  TLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            TLTVRRANQG  QPKPEQESVLLHAQQQIALQRLMLQP  V +K
Sbjct: 437  TLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 480


>ref|XP_006425714.1| hypothetical protein CICLE_v10025221mg [Citrus clementina]
            gi|568824761|ref|XP_006466763.1| PREDICTED: splicing
            factor U2af large subunit B-like isoform X1 [Citrus
            sinensis] gi|557527704|gb|ESR38954.1| hypothetical
            protein CICLE_v10025221mg [Citrus clementina]
          Length = 593

 Score =  477 bits (1228), Expect = e-132
 Identities = 242/284 (85%), Positives = 251/284 (88%), Gaps = 1/284 (0%)
 Frame = -3

Query: 851  GRINSGQMPGTTPSIPGMFPNMLPLASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPP 675
            G   +GQ+PG  P+IPGMFPNM PL +GQ FGALP+MPVQAMTQQATRHARRVYVGGLPP
Sbjct: 209  GAAAAGQIPGANPAIPGMFPNMFPLVTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPP 268

Query: 674  TANEQSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 495
            TANEQSVATFFS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI
Sbjct: 269  TANEQSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGI 328

Query: 494  IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPY 315
            IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPY
Sbjct: 329  IFEGAPVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPY 388

Query: 314  YFTESQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDK 135
            YFTE+QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDK
Sbjct: 389  YFTEAQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDK 448

Query: 134  TLTVRRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            TLTVRRANQG  QPKPEQESVLLHAQQQIALQRLMLQP  V +K
Sbjct: 449  TLTVRRANQGANQPKPEQESVLLHAQQQIALQRLMLQPGSVPSK 492


>gb|EOX91147.1| Splicing factor U2af large subunit A isoform 2 [Theobroma cacao]
          Length = 585

 Score =  477 bits (1228), Expect = e-132
 Identities = 239/280 (85%), Positives = 253/280 (90%), Gaps = 1/280 (0%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQ-FGALPIMPVQAMTQQATRHARRVYVGGLPPTANE 663
            +GQ+PGT P++PG+FPNM PLA+GQ FGALP+MP+QAMTQQATRHARRVYVGGLPPTANE
Sbjct: 205  TGQIPGTNPALPGVFPNMFPLATGQQFGALPVMPIQAMTQQATRHARRVYVGGLPPTANE 264

Query: 662  QSVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 483
            QSVAT+FS VM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
Sbjct: 265  QSVATYFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 324

Query: 482  APVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTE 303
            APVKVRRPSDYNPSLAATLGPSQPNPNLN               GPDRIFVGGLPYYFTE
Sbjct: 325  APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTE 384

Query: 302  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTV 123
            +QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTD AC  LNGI +GDKTLTV
Sbjct: 385  AQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 444

Query: 122  RRANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RRANQGTTQPKPEQES+L HAQQQIALQRLMLQP  + TK
Sbjct: 445  RRANQGTTQPKPEQESILQHAQQQIALQRLMLQPQGLPTK 484


>sp|Q9ZR39.1|U2A2A_NICPL RecName: Full=Splicing factor U2af large subunit A; AltName:
            Full=NpU2AF65a; AltName: Full=U2 auxiliary factor 65 kDa
            subunit A; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit A;
            Short=U2 snRNP auxiliary factor large subunit A
            gi|3850823|emb|CAA77136.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 555

 Score =  477 bits (1227), Expect = e-132
 Identities = 239/279 (85%), Positives = 249/279 (89%)
 Frame = -3

Query: 839  SGQMPGTTPSIPGMFPNMLPLASGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 660
            +GQ+PGT P+IPG+F NM PLAS QFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 176  AGQVPGTNPAIPGLFSNMFPLASSQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQ 235

Query: 659  SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 480
            SVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG+IFEG 
Sbjct: 236  SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGG 295

Query: 479  PVKVRRPSDYNPSLAATLGPSQPNPNLNXXXXXXXXXXXXXXXGPDRIFVGGLPYYFTES 300
            PVKVRRPSDYNPSLAATLGPSQP+PNLN               GPDRIFVGGLPYYFTES
Sbjct: 296  PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGSTPGSSGGLEGPDRIFVGGLPYYFTES 355

Query: 299  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDDACRNLNGIPLGDKTLTVR 120
            QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTD AC  LNGI +GDKTLTVR
Sbjct: 356  QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 415

Query: 119  RANQGTTQPKPEQESVLLHAQQQIALQRLMLQPSVVATK 3
            RANQGTTQP PEQESVLLHAQQQIALQR MLQP  +ATK
Sbjct: 416  RANQGTTQPNPEQESVLLHAQQQIALQRFMLQPGALATK 454


Top