BLASTX nr result
ID: Rehmannia24_contig00002434
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia24_contig00002434
(352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protei... 89 5e-16
ref|XP_002314076.1| photosystem II 5 kD family protein [Populus ... 83 4e-14
ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|1... 79 8e-13
gb|AFK47048.1| unknown [Lotus japonicus] 77 2e-12
gb|AFK48333.1| unknown [Medicago truncatula] 75 1e-11
ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycin... 75 1e-11
ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chl... 74 2e-11
gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus pe... 74 2e-11
sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protei... 74 2e-11
sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protei... 73 3e-11
gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus... 73 4e-11
gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theo... 72 6e-11
ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago trunc... 72 6e-11
gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma ... 72 8e-11
ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast pr... 71 1e-10
ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chl... 70 3e-10
ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycin... 70 3e-10
ref|XP_006349807.1| PREDICTED: photosystem II 5 kDa protein, chl... 69 8e-10
ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chl... 69 8e-10
gb|AFX66986.1| photosystem II 5 kDa protein [Solanum tuberosum] 68 1e-09
>gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein [Picrorhiza
kurrooa]
Length = 102
Score = 89.4 bits (220), Expect = 5e-16
Identities = 49/89 (55%), Positives = 57/89 (64%)
Frame = +3
Query: 12 AAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEERNNGRRELMFXXXXXXXXXXXXXXX 191
+AAAK LPTT R GV VRAS++SE+ V EE NN RR+LMF
Sbjct: 14 SAAAKQLPTT-GRGGVAMVRASKESEKLTVNVKEESNNTRRDLMFAMAAVVASSIANFAM 72
Query: 192 XDEPKRGSAEAKKKYAPICVTMPTARICR 278
DEPKRG+ EAKKKYA +CVT PTARIC+
Sbjct: 73 ADEPKRGTVEAKKKYAAVCVTNPTARICK 101
>ref|XP_002314076.1| photosystem II 5 kD family protein [Populus trichocarpa]
gi|222850484|gb|EEE88031.1| photosystem II 5 kD family
protein [Populus trichocarpa]
Length = 105
Score = 82.8 bits (203), Expect = 4e-14
Identities = 48/95 (50%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVN--EERNNGRRELMFXXXXXXXXXXX 179
GSA A + P+T PRRG++ +ASR +E + EE + GRR+LMF
Sbjct: 13 GSAMAKQ--PSTTPRRGLIVAKASRATEGVNVEMKNREESSGGRRDLMFAAAAAAAYSIA 70
Query: 180 XXXXXDE-PKRGSAEAKKKYAPICVTMPTARICRN 281
DE P+RG+ EAKKKYAPICVTMPTARICRN
Sbjct: 71 RVAIADEEPRRGTPEAKKKYAPICVTMPTARICRN 105
>ref|XP_002298398.1| predicted protein [Populus trichocarpa] gi|118487685|gb|ABK95667.1|
unknown [Populus trichocarpa]
gi|118488853|gb|ABK96236.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118488867|gb|ABK96243.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|118489821|gb|ABK96710.1| unknown [Populus trichocarpa
x Populus deltoides] gi|118489889|gb|ABK96742.1| unknown
[Populus trichocarpa x Populus deltoides]
Length = 105
Score = 78.6 bits (192), Expect = 8e-13
Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +3
Query: 33 PTTVPRRGVVAVRASRDSEEKMAVVN--EERNNGRRELMFXXXXXXXXXXXXXXXXDE-P 203
P T PRRG++ +ASR +E + EE ++GRR+LMF DE P
Sbjct: 20 PLTTPRRGLIVAKASRTTEGVNVEMKNKEESSSGRRDLMFAAAAAAAYSIARVAIADEEP 79
Query: 204 KRGSAEAKKKYAPICVTMPTARICR 278
+RG+ EAKKKYAPICVTMPTARICR
Sbjct: 80 ERGTPEAKKKYAPICVTMPTARICR 104
>gb|AFK47048.1| unknown [Lotus japonicus]
Length = 107
Score = 77.4 bits (189), Expect = 2e-12
Identities = 43/91 (47%), Positives = 46/91 (50%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEERNNGRRELMFXXXXXXXXXXXXX 185
GS RR VV A+R E V E NNGRR LMF
Sbjct: 12 GSPVLTSRSAVATQRRFVVNAAATRAVEGDNKVNEEGSNNGRRNLMFVSAAAAVCSVAGI 71
Query: 186 XXXDEPKRGSAEAKKKYAPICVTMPTARICR 278
DEPK GS EAKKKYAP+CVTMPTAR+CR
Sbjct: 72 ALADEPKNGSPEAKKKYAPVCVTMPTARVCR 102
>gb|AFK48333.1| unknown [Medicago truncatula]
Length = 108
Score = 74.7 bits (182), Expect = 1e-11
Identities = 46/96 (47%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 3 GGSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVV---NEERNNGRRELMFXXXXXXXXX 173
GGS+A A P R+ VVA A KM V +E NGRR +MF
Sbjct: 12 GGSSAIANRSPVATQRKLVVANAAKAVEGGKMKVNYDNEKEETNGRRNIMFAAAAAAVCS 71
Query: 174 XXXXXXX-DEPKRGSAEAKKKYAPICVTMPTARICR 278
DEPKRGS EAKK YAP+CVTMPTARICR
Sbjct: 72 VAGMALAADEPKRGSPEAKKAYAPVCVTMPTARICR 107
>ref|NP_001235677.1| uncharacterized protein LOC100527666 [Glycine max]
gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/93 (45%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNE-ERNNGRRELMFXXXXXXXXXXXX 182
GS RR +V A EK++ N+ + +NGRR LMF
Sbjct: 12 GSPTVTNRSAVATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFAAAAAAVCSVAG 71
Query: 183 XXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 281
DEPK G+ EAKKKYAPICVTMPTARICRN
Sbjct: 72 MAVADEPKPGTPEAKKKYAPICVTMPTARICRN 104
>ref|XP_004291777.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 104
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Frame = +3
Query: 39 TVPRRGVVAVRASRDSEEKMAVVN-----EERNNGRRELMFXXXXXXXXXXXXXXXXDEP 203
+ PRR ++ +ASR E + V EE ++GRR+L+F DEP
Sbjct: 19 STPRRSLIVAKASRAPEAEKVTVELKQSKEESSSGRRDLIFAAAAAAACSIAKVAMADEP 78
Query: 204 KRGSAEAKKKYAPICVTMPTARICR 278
+RG+ AKKKYAP+CVTMPTARICR
Sbjct: 79 ERGTPAAKKKYAPVCVTMPTARICR 103
>gb|EMJ13473.1| hypothetical protein PRUPE_ppa013712mg [Prunus persica]
Length = 107
Score = 74.3 bits (181), Expect = 2e-11
Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Frame = +3
Query: 12 AAAAKNLPTTVPRRGVVAVRASRDSEEK----MAVVNEERNNGRRELMFXXXXXXXXXXX 179
+A+ P+T R +VA +S EK M + ++GRR+LMF
Sbjct: 14 SASTITKPSTARRSLIVAKASSAPEGEKGSLEMKKSSSSSSSGRRDLMFAAAAAAACSIA 73
Query: 180 XXXXXDEPKRGSAEAKKKYAPICVTMPTARICRN 281
DEPKRGS EAK+KYAP+CVTMPTARICRN
Sbjct: 74 KAAMADEPKRGSKEAKEKYAPVCVTMPTARICRN 107
>sp|B3EWI4.1|PST2_PETHY RecName: Full=Photosystem II 5 kDa protein, chloroplastic; Flags:
Precursor
Length = 106
Score = 74.3 bits (181), Expect = 2e-11
Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +3
Query: 3 GGSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEE--RNNGRRELMFXXXXXXXXXX 176
GGS A +P+ RRGVV V+A + E + + E +N+GRREL F
Sbjct: 12 GGSTVAPAKVPSA-NRRGVVMVKAMHEGENNVVISKNEESKNSGRRELFFAMAAAAACSV 70
Query: 177 XXXXXXDE-PKRGSAEAKKKYAPICVTMPTARICR 278
DE PKRG+ EAKKKY+ +CVT PTARICR
Sbjct: 71 AKTAMADEEPKRGTPEAKKKYSSVCVTNPTARICR 105
>sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein, chloroplastic;
Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor gi|18512|emb|CAA38027.1|
hypothetical protein [Gossypium hirsutum]
Length = 105
Score = 73.2 bits (178), Expect = 3e-11
Identities = 45/89 (50%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Frame = +3
Query: 24 KNLPTTVPRRGVVAVRASRDSEEKMAVVNE---ERNNGRRELMFXXXXXXXXXXXXXXXX 194
K P RR VVA A E + + E E NNGRRE+MF
Sbjct: 18 KGSPRITQRRLVVANAAKGAQVESVQMSGERKTEGNNGRREMMFAAAAAAICSVAGVATA 77
Query: 195 DEPKRGSAEAKKKYAPICVTMPTARICRN 281
EPKRGSAEAKK YAP+CVTMPTARICRN
Sbjct: 78 -EPKRGSAEAKKAYAPVCVTMPTARICRN 105
>gb|ESW03384.1| hypothetical protein PHAVU_011G009700g [Phaseolus vulgaris]
Length = 106
Score = 72.8 bits (177), Expect = 4e-11
Identities = 43/93 (46%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNE---ERNNGRRELMFXXXXXXXXXX 176
GS+ + P PRR VVA + EK +E E NNGRR +MF
Sbjct: 12 GSSVISHRSPVASPRRLVVANASKAVEGEKTKFSSENDKEGNNGRRNMMFAAAAAAVCSV 71
Query: 177 XXXXXXDEPKRGSAEAKKKYAPICVTMPTARIC 275
DEPKRG+ EAKK Y PICVTMPTARIC
Sbjct: 72 AGMSMADEPKRGTPEAKKIYYPICVTMPTARIC 104
>gb|EOX96667.1| Photosystem II 5 kDa protein, chloroplastic [Theobroma cacao]
Length = 106
Score = 72.4 bits (176), Expect = 6e-11
Identities = 43/93 (46%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNE---ERNNGRRELMFXXXXXXXXXX 176
G+ + K P RR VVA A E++ + E E NNGRRELMF
Sbjct: 12 GATSLTKGSPRIAHRRLVVANAAKGAEVERVKLSGETKRECNNGRRELMFAAAAAAVCSV 71
Query: 177 XXXXXXDEPKRGSAEAKKKYAPICVTMPTARIC 275
DEPK G+ EA+K YAPICVTMPTARIC
Sbjct: 72 AGVAAADEPKPGTPEARKVYAPICVTMPTARIC 104
>ref|XP_003599257.1| Photosystem II 5 kDa protein [Medicago truncatula]
gi|355488305|gb|AES69508.1| Photosystem II 5 kDa protein
[Medicago truncatula]
Length = 106
Score = 72.4 bits (176), Expect = 6e-11
Identities = 45/92 (48%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Frame = +3
Query: 18 AAKNLPTTVPRRGVVAVRASRDSE-EKMAVVN--EERNNGRRELMFXXXXXXXXXXXXXX 188
A N + +R +V V A R E EKM + +E +NGRR+LMF
Sbjct: 15 AVTNQSSVASQRRLVVVNAVRAVEGEKMIRYDNSKEGSNGRRDLMFAAAAAAVSTFAGVA 74
Query: 189 XXDE-PKRGSAEAKKKYAPICVTMPTARICRN 281
DE PKRG+ EAKKKYAP+CVTMPTARICRN
Sbjct: 75 MADEEPKRGTPEAKKKYAPVCVTMPTARICRN 106
>gb|EOY32695.1| Photosystem II 5 kD protein, putative [Theobroma cacao]
Length = 122
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +3
Query: 30 LPTTVPRRGVVAVRASR--DSEEKMAVVNEERNNGRRELMFXXXXXXXXXXXXXXXX-DE 200
LP+T RRGV+ +AS + E+ + + NN RREL+F ++
Sbjct: 21 LPSTTARRGVIVAKASEAAEGEKGSRELKQGSNNRRRELVFAAAAAAACSIANVAMGAED 80
Query: 201 PKRGSAEAKKKYAPICVTMPTARICRN 281
PK G+ EAKKKYAPICVTMPTAR+C N
Sbjct: 81 PKAGTPEAKKKYAPICVTMPTARVCHN 107
>ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast precursor, putative
[Ricinus communis] gi|223547402|gb|EEF48897.1|
Photosystem II 5 kDa protein, chloroplast precursor,
putative [Ricinus communis]
Length = 106
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Frame = +3
Query: 33 PTTVPRRGVVAVRASRDSEEKMAVVN----EERNNGRRELMFXXXXXXXXXXXXXXXXDE 200
P T PRRG++ +AS+ +E + V EE ++GRR+L+F DE
Sbjct: 20 PFTAPRRGLIVAKASKVTEGERVNVEMKNKEESSSGRRDLVFAAAAAAAFSVAKVAMADE 79
Query: 201 PKRGSAEAKKKYAPICVTMPTARIC 275
PK G+ +AKKKYA ICV+MPTA+IC
Sbjct: 80 PKAGTLDAKKKYASICVSMPTAKIC 104
>ref|XP_006598270.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Glycine max]
Length = 133
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/94 (44%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNE-ERNNGRRELMFXXXXXXXXXXXX 182
G A L RR +V A EK++ N+ + +NGRR LMF
Sbjct: 40 GGPAVTNRLAVATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFAAAAAAAVCSVA 99
Query: 183 XXXX-DEPKRGSAEAKKKYAPICVTMPTARICRN 281
DEPK G+ AKKKYAPICVTMPTARICRN
Sbjct: 100 GMAVADEPKPGTPAAKKKYAPICVTMPTARICRN 133
>ref|NP_001238741.1| uncharacterized protein LOC100305919 [Glycine max]
gi|255626973|gb|ACU13831.1| unknown [Glycine max]
Length = 101
Score = 70.1 bits (170), Expect = 3e-10
Identities = 40/92 (43%), Positives = 51/92 (55%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEERNNGRRELMFXXXXXXXXXXXXX 185
G A K RR ++ V A++ EK++ N + +NGRR LMF
Sbjct: 12 GCPAVTKRSAVAAQRR-LLVVSAAKAEGEKVSYDNND-SNGRRNLMFAVAAAAVPSVAGM 69
Query: 186 XXXDEPKRGSAEAKKKYAPICVTMPTARICRN 281
DEPK G++EAKKKYAP+CVT PTA ICRN
Sbjct: 70 AVADEPKPGTSEAKKKYAPVCVTNPTASICRN 101
>ref|XP_006349807.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic-like
[Solanum tuberosum]
Length = 112
Score = 68.6 bits (166), Expect = 8e-10
Identities = 44/99 (44%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Frame = +3
Query: 3 GGSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEER-----NNGRRELMFXXXXXXX 167
GGS AA P VV V+AS + E VV ++ N GRREL F
Sbjct: 12 GGSVAALTKAPVATRGARVVMVKASSNVSEGENVVMSKKKEINNNGGRRELFFAMAAAAA 71
Query: 168 XXXXXXXXXD-EPKRGSAEAKKKYAPICVTMPTARICRN 281
D EPKRGS EAKKKY +CV+ PTARICRN
Sbjct: 72 CSVAGVAMADDEPKRGSPEAKKKYFQVCVSNPTARICRN 110
>ref|XP_002277909.1| PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vitis
vinifera] gi|147792102|emb|CAN66292.1| hypothetical
protein VITISV_027031 [Vitis vinifera]
Length = 109
Score = 68.6 bits (166), Expect = 8e-10
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +3
Query: 6 GSAAAAKNLPTTVPRRGVVAVRASRDSE---EKMAV---VNEERNNGRRELMFXXXXXXX 167
G A A P RR +V V ++R + EK+ + +E NNGRREL+F
Sbjct: 12 GGACLADRSPAAAARRRLVVVNSARAAAAEGEKVKLNYDAKKEANNGRRELVFAAAAAAV 71
Query: 168 XXXXXXXXXDEPKRGSAEAKKKYAPICVTMPTARIC 275
EPK G+ EAKK YAPICVTMPTA+IC
Sbjct: 72 CSVAGIAMAGEPKPGTPEAKKIYAPICVTMPTAKIC 107
>gb|AFX66986.1| photosystem II 5 kDa protein [Solanum tuberosum]
Length = 112
Score = 68.2 bits (165), Expect = 1e-09
Identities = 44/99 (44%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 3 GGSAAAAKNLPTTVPRRGVVAVRASRDSEEKMAVVNEER-----NNGRRELMFXXXXXXX 167
GGS AA P VV V+AS + E VV + N GRREL F
Sbjct: 12 GGSVAALTKAPVATRGARVVMVKASSNVSEGENVVMSNKKEINNNGGRRELFFAMAAAAA 71
Query: 168 XXXXXXXXXD-EPKRGSAEAKKKYAPICVTMPTARICRN 281
D EPKRGS EAKKKY +CV+ PTARICRN
Sbjct: 72 CSVAGVAMADDEPKRGSPEAKKKYFQVCVSNPTARICRN 110